├── .gitignore ├── .gitmodules ├── README.md ├── README_detailed.md ├── conf ├── log4j.properties └── samples │ ├── hb-collections-eval │ ├── HBASE-12091.properties │ ├── HBASE-13333.properties │ ├── HBASE-14822.properties │ ├── HBASE-24359.properties │ ├── HBASE-8099.properties │ └── HBASE-8207.properties │ ├── hb-collections-extended │ ├── HBASE-10829.properties │ ├── HBASE-10845.properties │ ├── HBASE-11511.properties │ ├── HBASE-15236.properties │ ├── HBASE-15837.properties │ ├── HBASE-17125.properties │ ├── HBASE-17565.properties │ ├── HBASE-20588.properties │ ├── HBASE-20704.properties │ ├── HBASE-23197.properties │ ├── HBASE-24189.properties │ ├── HBASE-2823.properties │ ├── HBASE-3636.properties │ ├── HBASE-5689.properties │ ├── HBASE-6311.properties │ ├── HBASE-6900.properties │ ├── HBASE-7537.properties │ ├── HBASE-7701.properties │ └── HBASE-7731.properties │ ├── hb-collections-large │ ├── HBASE-10352.properties │ ├── HBASE-10958.properties │ ├── HBASE-11569.properties │ ├── HBASE-11571.properties │ ├── HBASE-11609.properties │ ├── HBASE-11908.properties │ ├── HBASE-12375.properties │ ├── HBASE-12535.properties │ ├── HBASE-13253.properties │ ├── HBASE-13515.properties │ ├── HBASE-13709.properties │ ├── HBASE-14054.properties │ ├── HBASE-14497.properties │ ├── HBASE-14541.properties │ ├── HBASE-15035.properties │ ├── HBASE-15085.properties │ ├── HBASE-15392.properties │ ├── HBASE-15441.properties │ ├── HBASE-15871.properties │ ├── HBASE-16754.properties │ ├── HBASE-17887.properties │ ├── HBASE-17958.properties │ ├── HBASE-18019.properties │ ├── HBASE-18133.properties │ ├── HBASE-18145.properties │ ├── HBASE-18158.properties │ ├── HBASE-18220.properties │ ├── HBASE-18221.properties │ ├── HBASE-18295.properties │ ├── HBASE-18752.properties │ ├── HBASE-18960.properties │ ├── HBASE-20856.properties │ ├── HBASE-21191.properties │ ├── HBASE-21200.properties │ ├── HBASE-21247.properties │ ├── HBASE-22200.properties │ ├── HBASE-22707.properties │ ├── HBASE-22710.properties │ ├── HBASE-24205.properties │ ├── HBASE-24221.properties │ ├── HBASE-25212.properties │ ├── HBASE-3492.properties │ ├── HBASE-3696.properties │ ├── HBASE-4721.properties │ ├── HBASE-5199.properties │ ├── HBASE-6269.properties │ ├── HBASE-7571.properties │ ├── HBASE-7849.properties │ ├── HBASE-8192.properties │ └── HBASE-8361.properties │ ├── hb-collections │ ├── HBASE-10514.properties │ ├── HBASE-13811.properties │ ├── HBASE-13938.properties │ ├── HBASE-15529.properties │ ├── HBASE-1686.properties.invalid │ ├── HBASE-4797.properties │ ├── HBASE-4797.properties.old │ ├── HBASE-5121.properties │ ├── HBASE-5121.properties.old │ ├── HBASE-5724.properties.old │ └── HBASE-6329.properties.invalid │ ├── hb-patches │ ├── HBASE-10352.patch │ ├── HBASE-10514.patch │ ├── HBASE-10829.patch │ ├── HBASE-10845.patch │ ├── HBASE-10958.patch │ ├── HBASE-11511.patch │ ├── HBASE-11569.patch │ ├── HBASE-11571.patch │ ├── HBASE-11609.patch │ ├── HBASE-11908.patch │ ├── HBASE-12375.patch │ ├── HBASE-12535.patch │ ├── HBASE-13253.patch │ ├── HBASE-13333.patch │ ├── HBASE-13515.patch │ ├── HBASE-13709.patch │ ├── HBASE-13811.patch │ ├── HBASE-13938.patch │ ├── HBASE-14054.patch │ ├── HBASE-14497.patch │ ├── HBASE-14541.patch │ ├── HBASE-14822.patch │ ├── HBASE-15035.patch │ ├── HBASE-15085.patch │ ├── HBASE-15236.patch │ ├── HBASE-15392.patch │ ├── HBASE-15441.patch │ ├── HBASE-15529.patch │ ├── HBASE-15837.patch │ ├── HBASE-15871.patch │ ├── HBASE-16754.patch │ ├── HBASE-17125.patch │ ├── HBASE-17565.patch │ ├── HBASE-17887.patch │ ├── HBASE-17958.patch │ ├── HBASE-18019.patch │ ├── HBASE-18133.patch │ ├── HBASE-18145.patch │ ├── HBASE-18158.patch │ ├── HBASE-18220.patch │ ├── HBASE-18221.patch │ ├── HBASE-18295.patch │ ├── HBASE-18752.patch │ ├── HBASE-18960.patch │ ├── HBASE-20588.patch │ ├── HBASE-20704.patch │ ├── HBASE-20856.patch │ ├── HBASE-3492.patch │ ├── HBASE-3696.patch │ ├── HBASE-4721.patch │ ├── HBASE-4797.patch │ ├── HBASE-5199.patch │ ├── HBASE-6269.patch │ ├── HBASE-6329.patch │ ├── HBASE-7571.patch │ ├── HBASE-7849.patch │ ├── HBASE-8192.patch │ └── HBASE-8361.patch │ ├── hbase-1.3.1.properties │ ├── hbase-2.4.properties │ ├── hdfs-3.2.1.properties │ ├── hdfs-collections-basic │ ├── HDFS-10192.properties │ ├── HDFS-10536.properties │ ├── HDFS-10968.properties │ ├── HDFS-11960.properties │ ├── HDFS-12862.properties │ ├── HDFS-13120.properties │ ├── HDFS-13192.properties │ ├── HDFS-14504.properties │ ├── HDFS-8950.properties │ └── HDFS-9204.properties │ ├── hdfs-collections │ ├── HDFS-10240.properties │ ├── HDFS-11160.properties │ ├── HDFS-11402.properties │ ├── HDFS-12217.properties │ ├── HDFS-14317.properties │ ├── HDFS-14359.properties │ ├── HDFS-14633.properties │ ├── HDFS-14699.properties │ ├── HDFS-14847.properties │ ├── HDFS-15421.properties │ ├── HDFS-3087.properties │ ├── HDFS-6500.properties │ ├── HDFS-6981.properties │ └── HDFS-8647.properties │ ├── hdfs-patches │ ├── HDFS-14317.patch │ ├── HDFS-8950.patch │ ├── NameNodeHttpServer-12862.patch │ ├── NameNodeHttpServer-9204.patch │ ├── NameNodeHttpServer.patch │ ├── install_hdfs.patch │ ├── install_hdfs_14514.patch │ └── remove_maven-project-info-reports-plugin.patch │ ├── kafka-0.10.0.0.properties │ ├── kafka-2.6.properties │ ├── kf-collections │ ├── KAFKA-6254.properties │ └── KAFKA-9137.properties │ ├── zk-3.6.1.properties │ ├── zk-collections-2nd │ ├── ZK-1699.properties │ ├── ZK-1797.properties │ ├── ZK-1863.properties │ ├── ZK-2325.properties │ ├── ZK-2418.properties │ ├── ZK-2574.properties │ ├── ZK-2774.properties │ ├── ZK-2808.properties │ ├── ZK-2901.properties │ ├── ZK-2926.properties │ ├── ZK-3104.properties │ ├── ZK-3125.properties │ ├── ZK-3144.properties │ ├── ZK-3145.properties │ └── ZK-3306.properties │ ├── zk-collections-3nd │ └── ZK-1573.properties │ ├── zk-collections-basic │ ├── ZK-1046.properties │ ├── ZK-1208.properties │ ├── ZK-1412.properties │ ├── ZK-1573.properties │ ├── ZK-1754.properties │ ├── ZK-1755.properties │ ├── ZK-2680.properties │ └── ZK-2797.properties │ ├── zk-collections-cc │ ├── ZK-1208.properties │ ├── ZK-1496.properties │ ├── ZK-1573.properties │ ├── ZK-1667.properties │ ├── ZK-1754.properties │ ├── ZK-1797.properties │ ├── ZK-1863.properties │ ├── ZK-1910.properties │ ├── ZK-2325.properties │ ├── ZK-2355.properties │ ├── ZK-2418.properties │ ├── ZK-2563.properties │ ├── ZK-2574.properties │ ├── ZK-2680.properties │ ├── ZK-2774.properties │ ├── ZK-2808.properties │ ├── ZK-2901.properties │ ├── ZK-2926.properties │ ├── ZK-3104.properties │ ├── ZK-3125.properties │ ├── ZK-3144.properties │ ├── ZK-3145.properties │ └── ZK-3306.properties │ ├── zk-collections │ ├── ZK-1208.properties │ ├── ZK-1496.properties │ ├── ZK-1667.properties │ ├── ZK-1754.properties │ ├── ZK-1910.properties │ ├── ZK-2052.properties │ ├── ZK-2355.properties │ ├── ZK-2563.properties │ ├── ZK-2680.properties │ └── ZK-2739.properties.invalid │ └── zk-patches │ ├── ZK-1046.patch │ ├── ZK-1797.patch │ ├── ZK-1863.patch │ ├── ZK-2680-1.patch │ ├── ZK-2680-2.patch │ ├── ZK-2774.patch │ ├── ZK-2808.patch │ ├── ZK-2901.patch │ ├── ZK-3306.patch │ ├── https.1046.patch │ ├── https.patch │ ├── install_zk-3.6.1.patch │ └── install_zk.patch ├── experiments ├── config │ ├── hdfs │ │ ├── localtest │ │ │ ├── core-site.xml │ │ │ └── hdfs-site.xml │ │ └── perf │ │ │ ├── core-site.xml │ │ │ ├── hdfs-site.xml │ │ │ └── workers │ └── zookeeper │ │ ├── bench_perf.conf │ │ └── zoo.cfg.patch ├── misc │ └── hdfs │ │ ├── NNBenchWithoutMR.java │ │ ├── editJAVAHOME.sh │ │ └── hadoopbench.patch ├── notes │ ├── HDFS-14317.md │ ├── HDFS-14514.md │ ├── HDFS-14633.md │ ├── HDFS-14699.md │ └── ZK-3546.md ├── reproduce │ ├── HDFS-14317 │ │ ├── core-site.xml │ │ ├── hadoop-env.sh │ │ ├── hdfs-site.xml │ │ ├── hook_HDFS-14317.patch │ │ ├── install_HDFS-14317.sh │ │ ├── trigger_HDFS-14317.sh │ │ └── workers │ ├── HDFS-14514 │ │ ├── Repro.java │ │ ├── core-site.xml │ │ ├── deprecated │ │ │ ├── Makefile │ │ │ └── append.c │ │ ├── hdfs-site.xml │ │ ├── install_HDFS-14514.sh │ │ ├── kms-site.xml │ │ └── trigger_HDFS-14514.sh │ ├── HDFS-14633 │ │ ├── HDFS-14633.patch │ │ ├── HDFS-14633.sh │ │ ├── core-site.xml │ │ ├── hdfs-site.xml │ │ ├── install_HDFS-14633.sh │ │ ├── trigger_HDFS-14633.sh │ │ └── workers │ ├── HDFS-14699 │ │ ├── HDFS-14699.sh │ │ ├── core-site.xml │ │ ├── hdfs-site.xml │ │ ├── hook_HDFS-14699.patch │ │ ├── install_HDFS-14699.sh │ │ ├── trigger_HDFS-14699.sh │ │ └── workers │ └── ZK-3546 │ │ ├── ZK-3546.sh │ │ ├── hook_ZK-3546.patch │ │ ├── install_ZK-3546.sh │ │ └── trigger_ZK-3546.sh └── run │ ├── hdfs │ ├── cleanup.sh │ ├── start.sh │ └── throughput.sh │ └── zookeeper │ ├── cleanup.sh │ ├── start.sh │ └── throughput.sh ├── install_deps.sh ├── lib ├── generator-1.0-SNAPSHOT.jar └── jdepend-2.10.jar ├── misc └── scripts │ ├── hbase │ ├── find_prefix.py │ ├── gen_patch.py │ ├── gen_properties.py │ ├── insert_cached_classpath.py │ ├── insert_compile_command.py │ └── insert_test_path.py │ ├── kill.sh │ └── zookeeper │ └── ZK-1496 │ ├── ZK-1496.patch │ ├── all_ZK-1496.sh │ ├── install_ZK-1496.sh │ ├── repro_ZK-1496.sh │ └── trigger_ZK-1496.sh ├── pom.xml ├── run_engine.sh └── src ├── main └── java │ └── oathkeeper │ ├── engine │ ├── InferEngine.java │ ├── MainWrapper.java │ ├── StaticInstrumentEngine.java │ └── tester │ │ ├── TestClassPool.java │ │ ├── TestEngine.java │ │ └── TestListener.java │ ├── runtime │ ├── CalcUtils.java │ ├── ConfigManager.java │ ├── DynamicClassModifier.java │ ├── EventTracer.java │ ├── FileLayoutManager.java │ ├── InvariantStore.java │ ├── OKHelper.java │ ├── RuntimeChecker.java │ ├── TemplateManager.java │ ├── event │ │ ├── MarkerEvent.java │ │ ├── OpTriggerEvent.java │ │ ├── SemanticEvent.java │ │ └── StateUpdateEvent.java │ ├── eventlist │ │ ├── CircularBuffer.java │ │ ├── EventList.java │ │ ├── EventListBuilder.java │ │ ├── SynchronizedArrayList.java │ │ └── TimeToLiveList.java │ ├── gson │ │ ├── GsonUtils.java │ │ └── InterfaceAdapter.java │ ├── invariant │ │ ├── Context.java │ │ └── Invariant.java │ ├── template │ │ ├── AfterOpAtomicStateUpdateTemplate.java │ │ ├── EventHappenBeforeEventTemplate.java │ │ ├── EventImplyEventTemplate.java │ │ ├── EventProtectedByEventTemplate.java │ │ ├── OpAddTimeDenyOpTemplate.java │ │ ├── OpAddTimeInvokeOpTemplate.java │ │ ├── OpHappenBeforeOpTemplate.java │ │ ├── OpHappenBeforeStateChangeTemplate.java │ │ ├── OpImplyOpTemplate.java │ │ ├── OpImplyStateChangeTemplate.java │ │ ├── OpMutualExclusiveTemplate.java │ │ ├── OpPeriodicTemplate.java │ │ ├── OpProtectedByOpTemplate.java │ │ ├── OpProtectedByStateChangeTemplate.java │ │ ├── StateChangeHappenBeforeOpTemplate.java │ │ ├── StateChangeHappenBeforeStateChangeTemplate.java │ │ ├── StateChangeImplyOpTemplate.java │ │ ├── StateChangeImplyStateChangeTemplate.java │ │ ├── StateChangeProtectedByOpTemplate.java │ │ ├── StateChangeProtectedByStateChangeTemplate.java │ │ ├── StateEqualsDenyOpTemplate.java │ │ └── Template.java │ ├── template_v1 │ │ ├── EventHappenBeforeEventTemplateV1.java │ │ ├── EventImplyEventTemplateV1.java │ │ ├── EventProtectedByEventTemplateV1.java │ │ └── TemplateV1.java │ └── utils │ │ └── BashUtil.java │ └── tool │ ├── InvChecker.java │ ├── InvComparator.java │ ├── InvMerger.java │ ├── InvOptimizer.java │ ├── InvSearcher.java │ ├── InvSplitter.java │ └── InvStatPrinter.java └── test └── java ├── TestDynamicInstrument.java ├── TestInferAlgorithm.java ├── TestInferAlgorithmRealTraces.java ├── TestInferAlgorithmV1.java ├── TestUtils.java ├── TestVerifyAlgorithm.java ├── TestVerifyAlgorithmV1.java ├── realtraces ├── org.apache.hadoop.hbase.regionserver.TestHRegion@testSkipRecoveredEditsReplayAllIgnored_patched ├── org.apache.hadoop.hbase.regionserver.TestHRegion@testSkipRecoveredEditsReplayAllIgnored_unpatched ├── org.apache.hadoop.hbase.wal.TestWALFactory@testCustomProvider_patched └── org.apache.hadoop.hbase.wal.TestWALFactory@testCustomProvider_unpatched └── traces ├── 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