├── LICENSE ├── README.md ├── data └── TEAseq │ ├── test_adt.h5 │ ├── test_atac.h5 │ ├── test_cty.csv │ ├── test_rna.h5 │ ├── train_adt.h5 │ ├── train_atac.h5 │ ├── train_cty.csv │ └── train_rna.h5 ├── environment_matilda.yaml ├── img ├── logo.png ├── main.jpg ├── simulation_anchor.jpg ├── visualisation.jpg └── visualisation2.png ├── main ├── learn │ ├── model.py │ ├── model_rna.py │ ├── predict.py │ └── train.py ├── main_matilda_rna_task.py ├── main_matilda_rna_train.py ├── main_matilda_task.py ├── main_matilda_train.py └── util.py └── qc ├── data_to_h5.R ├── visualize_simulated_data.Rmd └── visulize_latent_space.Rmd /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/PYangLab/Matilda/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- 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