├── .gitignore ├── LICENSE ├── README.md ├── additional_png └── additional.png ├── data ├── train │ ├── domain_1.tsv │ └── domain_2.h5ad └── val │ └── domain_val.csv ├── data_loaders └── domian_loaders.py ├── infer.py ├── models └── model.py ├── requirements.txt ├── sample_result_saliency ├── gene_list.txt ├── grad.csv ├── saliency_map.png ├── top_20_gene_list_0.txt ├── top_20_gene_list_1.txt ├── top_20_gene_list_2.txt ├── top_20_gene_list_3.txt ├── top_20_gene_list_4.txt ├── train_log_loss.txt └── train_log_val.txt ├── train.py ├── train_gene_set.py ├── train_saliency_map.py └── utils ├── args_utils.py └── opt_utils.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Patchouli-M/SequencingCancerFinder/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- 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