├── LICENSE ├── NexToU_Touchstone Benchmark.md ├── README.md ├── assets ├── BTCV_results.jpg ├── ICA_results.jpg ├── NexToU_architecture.jpg └── qualitative_visualizations.jpg ├── inference ├── inference_synapse.py └── inference_synapse_run.sh ├── loss ├── bti_loss.py ├── compound_bti_loss.py ├── compound_ti_loss.py └── ti_loss.py ├── network_architecture ├── NexToU.py ├── NexToU_Encoder_Decoder.py ├── pos_embed.py ├── torch_edge.py └── torch_nn.py ├── nnUNetPlans.json ├── nnUNetTrainer ├── nnUNetTrainer_NexToU.py ├── nnUNetTrainer_NexToU_BTI_ICA_NoMirroring.py ├── nnUNetTrainer_NexToU_BTI_RAVIR.py ├── nnUNetTrainer_NexToU_BTI_Synapse.py ├── nnUNetTrainer_NexToU_NoMirroring.py ├── nnUNetTrainer_NexToU_TI.py └── nnUNetTrainer_NexToU_TI_NoMirroring.py └── nnUNet_preprocessed └── Dataset111_Synapse_CT └── splits_final.json /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/PengchengShi1220/NexToU/HEAD/LICENSE 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