├── .DS_Store ├── .Rbuildignore ├── .gitignore ├── DESCRIPTION ├── Dockerfile ├── NAMESPACE ├── NEWS.md ├── Picture1.png ├── R ├── .DS_Store ├── ADAP.R ├── COLA.R ├── DLM.R ├── DPQL.R ├── DisC2o.R ├── LATTE.R ├── ODAC.R ├── ODACAT.R ├── ODACATH.R ├── ODACH_CC.R ├── ODACT.R ├── ODAH.R ├── ODAL.R ├── ODAP.R ├── ODAPB.R ├── RcppExports.R ├── case_cohort.R ├── dGEM.R ├── data.R ├── dlmm.R ├── latte-misc.R ├── odacat-misc.R ├── odacath-misc.R ├── odact-misc.R ├── pda.R └── zzz.R ├── README.md ├── README.rst ├── data ├── ADAP_data.rda ├── COLA_covid.rda ├── LATTE_ADRD.rda ├── LOS.rda ├── ODACAT_nominal.RData ├── ODACAT_ordinal.rda ├── covid.rda ├── cs.rda ├── long_covid.rda ├── lung2.rda ├── nominal_data_hetero.RData ├── odach_cc.rda └── ordinal_data.RData ├── demo ├── 00Index ├── ADAP.R ├── COLA.R ├── DLM.R ├── DPQL.R ├── DisC2o.R ├── LATTE-.R ├── LATTE.R ├── ODAC.R ├── ODACAT.R ├── ODACH.R ├── ODACH_CC.R ├── ODACT.R ├── ODAH.R ├── ODAL.R └── dGEM.R ├── docker-compose.yml ├── man ├── ADAP.derive.Rd ├── ADAP.estimate.Rd ├── ADAP.initialize.Rd ├── ADAP_data.Rd ├── COLA.estimate.Rd ├── COLA.initialize.Rd ├── COLA_covid.Rd ├── DLM.estimate.Rd ├── DLM.initialize.Rd ├── DPQL.derive.Rd ├── DPQL.estimate.Rd ├── DPQL.initialize.Rd ├── DisC2o.AIPWestimate.Rd ├── DisC2o.OMderive.Rd ├── DisC2o.OMestimate.Rd ├── DisC2o.OMinitialize.Rd ├── DisC2o.PSderive.Rd ├── DisC2o.PSestimate.Rd ├── DisC2o.PSinitialize.Rd ├── DisC2o.synthesize.Rd ├── LATTE.estimate.Rd ├── LATTE.initialize.Rd ├── LATTE_ADRD.Rd ├── LOS.Rd ├── ODAC.derive.Rd ├── ODAC.deriveUWZ.Rd ├── ODAC.estimate.Rd ├── ODAC.initialize.Rd ├── ODAC.synthesize.Rd ├── ODACAT.derive.Rd ├── ODACAT.estimate.Rd ├── ODACAT.initialize.Rd ├── ODACAT.synthesize.Rd ├── ODACATH.derive.Rd ├── ODACATH.estimate.Rd ├── ODACATH.initialize.Rd ├── ODACATH.synthesize.Rd ├── ODACAT_nominal.Rd ├── ODACAT_ordinal.Rd ├── ODACH_CC.derive.Rd ├── ODACH_CC.estimate.Rd ├── ODACH_CC.initialize.Rd ├── ODACH_CC.synthesize.Rd ├── ODACT.derive.Rd ├── ODACT.estimate.Rd ├── ODACT.initialize.Rd ├── ODACT.synthesize.Rd ├── ODAH.derive.Rd ├── ODAH.estimate.Rd ├── ODAH.initialize.Rd ├── ODAL.derive.Rd ├── ODAL.estimate.Rd ├── ODAL.initialize.Rd ├── ODAL.synthesize.Rd ├── ODAP.derive.Rd ├── ODAP.estimate.Rd ├── ODAP.initialize.Rd ├── ODAPB.derive.Rd ├── ODAPB.estimate.Rd ├── ODAPB.initialize.Rd ├── cola_glmm.Rd ├── covid.Rd ├── cs.Rd ├── dGEM.derive.Rd ├── dGEM.estimate.Rd ├── dGEM.initialize.Rd ├── dGEM.synthesize.Rd ├── estimatePool.Rd ├── generate_CSU_site.Rd ├── getCloudConfig.Rd ├── long_covid.Rd ├── lung2.Rd ├── make_patterns.Rd ├── myglmmPQL.Rd ├── nominal_data_hetero.Rd ├── odach_cc.Rd ├── ordinal_data.Rd ├── pda.Rd ├── pdaCatalog.Rd ├── pdaGet.Rd ├── pdaList.Rd ├── pdaPut.Rd ├── pdaSync.Rd └── run_pooled_analysis.Rd └── src ├── DisC2o.cpp ├── Makevars ├── Makevars.win ├── RcppExports.cpp ├── odact.cpp ├── rcpp_coxph.cpp ├── rcpp_coxph.h ├── rcpp_odach_cc.cpp └── utils.h /.DS_Store: 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