├── .gitignore ├── CHANGELOG.md ├── CITATION.cff ├── Install ReefShape (Mac).zip ├── Install ReefShape (PC).bat ├── LICENSE ├── README.md ├── ReefShape_Scripts ├── 01_full_reefshape_workflow.py ├── 02_align_chunks.py ├── 03_optimization_process.py ├── 04_scale_model.py ├── 05_create_boundary.py ├── 06_copy_boundary.py ├── 07_calculate_area_ratio.py ├── 08_clean_project.py └── ui_components.py └── Resources ├── Data Collection Cheat Sheet.pdf ├── Georef Example.csv └── Scalebar Example.txt /.gitignore: -------------------------------------------------------------------------------- 1 | .DS_Store 2 | questions.md 3 | TEST/ 4 | __pycache__/ 5 | -------------------------------------------------------------------------------- /CHANGELOG.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Perry-Institute/ReefShape/HEAD/CHANGELOG.md -------------------------------------------------------------------------------- /CITATION.cff: 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