├── slides.css
├── docs
├── slides.css
├── site_libs
│ ├── bootstrap-3.3.5
│ │ ├── css
│ │ │ └── fonts
│ │ │ │ ├── Lato.ttf
│ │ │ │ ├── Roboto.ttf
│ │ │ │ ├── Ubuntu.ttf
│ │ │ │ ├── LatoBold.ttf
│ │ │ │ ├── OpenSans.ttf
│ │ │ │ ├── Raleway.ttf
│ │ │ │ ├── LatoItalic.ttf
│ │ │ │ ├── NewsCycle.ttf
│ │ │ │ ├── RalewayBold.ttf
│ │ │ │ ├── RobotoBold.ttf
│ │ │ │ ├── RobotoLight.ttf
│ │ │ │ ├── NewsCycleBold.ttf
│ │ │ │ ├── OpenSansBold.ttf
│ │ │ │ ├── OpenSansLight.ttf
│ │ │ │ ├── RobotoMedium.ttf
│ │ │ │ ├── SourceSansPro.ttf
│ │ │ │ ├── OpenSansItalic.ttf
│ │ │ │ ├── OpenSansBoldItalic.ttf
│ │ │ │ ├── SourceSansProBold.ttf
│ │ │ │ ├── SourceSansProLight.ttf
│ │ │ │ ├── OpenSansLightItalic.ttf
│ │ │ │ └── SourceSansProItalic.ttf
│ │ ├── fonts
│ │ │ ├── glyphicons-halflings-regular.eot
│ │ │ ├── glyphicons-halflings-regular.ttf
│ │ │ ├── glyphicons-halflings-regular.woff
│ │ │ └── glyphicons-halflings-regular.woff2
│ │ ├── js
│ │ │ └── npm.js
│ │ └── shim
│ │ │ ├── html5shiv.min.js
│ │ │ └── respond.min.js
│ ├── ioslides-13.5.1
│ │ ├── fonts
│ │ │ ├── OpenSans.ttf
│ │ │ ├── OpenSansItalic.ttf
│ │ │ ├── SourceCodePro.ttf
│ │ │ ├── OpenSansSemibold.ttf
│ │ │ ├── OpenSansSemiboldItalic.ttf
│ │ │ └── fonts.css
│ │ ├── js
│ │ │ ├── prettify
│ │ │ │ ├── lang-tex.js
│ │ │ │ ├── lang-yaml.js
│ │ │ │ ├── prettify.css
│ │ │ │ ├── lang-r.js
│ │ │ │ └── prettify.js
│ │ │ ├── polyfills
│ │ │ │ ├── dataset.min.js
│ │ │ │ ├── classList.min.js
│ │ │ │ └── history.min.js
│ │ │ ├── order.js
│ │ │ ├── slide-controller.js
│ │ │ ├── modernizr.custom.45394.js
│ │ │ ├── require-1.0.8.min.js
│ │ │ └── hammer.js
│ │ ├── images
│ │ │ └── google_developers_icon_128.png
│ │ └── theme
│ │ │ └── css
│ │ │ └── phone.css
│ ├── font-awesome-5.1.0
│ │ └── webfonts
│ │ │ ├── fa-brands-400.eot
│ │ │ ├── fa-brands-400.ttf
│ │ │ ├── fa-brands-400.woff
│ │ │ ├── fa-regular-400.eot
│ │ │ ├── fa-regular-400.ttf
│ │ │ ├── fa-solid-900.eot
│ │ │ ├── fa-solid-900.ttf
│ │ │ ├── fa-solid-900.woff
│ │ │ ├── fa-solid-900.woff2
│ │ │ ├── fa-brands-400.woff2
│ │ │ ├── fa-regular-400.woff
│ │ │ └── fa-regular-400.woff2
│ ├── jqueryui-1.11.4
│ │ ├── images
│ │ │ ├── ui-icons_444444_256x240.png
│ │ │ ├── ui-icons_555555_256x240.png
│ │ │ ├── ui-icons_777620_256x240.png
│ │ │ ├── ui-icons_777777_256x240.png
│ │ │ ├── ui-icons_cc0000_256x240.png
│ │ │ └── ui-icons_ffffff_256x240.png
│ │ ├── README
│ │ ├── jquery-ui.structure.min.css
│ │ ├── jquery-ui.theme.min.css
│ │ ├── jquery-ui.structure.css
│ │ └── jquery-ui.theme.css
│ ├── highlightjs-9.12.0
│ │ ├── default.css
│ │ └── textmate.css
│ ├── navigation-1.1
│ │ ├── sourceembed.js
│ │ ├── codefolding.js
│ │ └── tabsets.js
│ ├── header-attrs-2.7
│ │ └── header-attrs.js
│ └── tocify-1.9.1
│ │ └── jquery.tocify.css
├── lecture_1.html
├── lectures.html
└── index.html
├── lectures.Rmd
├── Simple-Website-doc.Rproj
├── _site.yml
├── index.Rmd
├── .gitignore
├── lecture_1.Rmd
└── README.md
/slides.css:
--------------------------------------------------------------------------------
1 | .title-slide hgroup h1 {
2 | font-size: 36pt;
3 | letter-spacing: 0;
4 | }
5 |
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/docs/slides.css:
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1 | .title-slide hgroup h1 {
2 | font-size: 36pt;
3 | letter-spacing: 0;
4 | }
5 |
--------------------------------------------------------------------------------
/lectures.Rmd:
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1 | ---
2 | title: "Lecture presentations"
3 | output: html_document
4 | ---
5 |
6 | * [Lecture 1](lecture_1.html)
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1 |
2 | @media only screen and (max-device-width: 480px) {
3 |
4 | slides>slide{-webkit-transition:none !important;-webkit-transition:none !important;-moz-transition:none !important;-o-transition:none !important;transition:none !important}
5 |
6 | }
7 |
--------------------------------------------------------------------------------
/Simple-Website-doc.Rproj:
--------------------------------------------------------------------------------
1 | Version: 1.0
2 |
3 | RestoreWorkspace: Default
4 | SaveWorkspace: Default
5 | AlwaysSaveHistory: Default
6 |
7 | EnableCodeIndexing: Yes
8 | UseSpacesForTab: Yes
9 | NumSpacesForTab: 2
10 | Encoding: UTF-8
11 |
12 | RnwWeave: Sweave
13 | LaTeX: pdfLaTeX
14 |
15 | BuildType: Website
16 |
--------------------------------------------------------------------------------
/_site.yml:
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1 | name: "docs"
2 | navbar:
3 | title: ""
4 | left:
5 | - text: ""
6 | icon: fa-home fa-lg
7 | href: index.html
8 | - text: "Lectures"
9 | href: lectures.html
10 |
11 | output_dir: "docs"
12 | output:
13 | html_document:
14 | theme: cosmo
15 | highlight: textmate
16 |
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/docs/site_libs/highlightjs-9.12.0/default.css:
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1 | .hljs-literal {
2 | color: #990073;
3 | }
4 |
5 | .hljs-number {
6 | color: #099;
7 | }
8 |
9 | .hljs-comment {
10 | color: #998;
11 | font-style: italic;
12 | }
13 |
14 | .hljs-keyword {
15 | color: #900;
16 | font-weight: bold;
17 | }
18 |
19 | .hljs-string {
20 | color: #d14;
21 | }
22 |
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/docs/site_libs/highlightjs-9.12.0/textmate.css:
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1 | .hljs-literal {
2 | color: rgb(88, 72, 246);
3 | }
4 |
5 | .hljs-number {
6 | color: rgb(0, 0, 205);
7 | }
8 |
9 | .hljs-comment {
10 | color: rgb(76, 136, 107);
11 | }
12 |
13 | .hljs-keyword {
14 | color: rgb(0, 0, 255);
15 | }
16 |
17 | .hljs-string {
18 | color: rgb(3, 106, 7);
19 | }
20 |
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/docs/site_libs/navigation-1.1/sourceembed.js:
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1 |
2 | window.initializeSourceEmbed = function(filename) {
3 | $("#rmd-download-source").click(function() {
4 | var src = $("#rmd-source-code").html();
5 | var a = document.createElement('a');
6 | a.href = "data:text/x-r-markdown;base64," + src;
7 | a.download = filename;
8 | document.body.appendChild(a);
9 | a.click();
10 | document.body.removeChild(a);
11 | });
12 | };
13 |
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/docs/site_libs/ioslides-13.5.1/js/prettify/lang-yaml.js:
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1 | var a=null;
2 | PR.registerLangHandler(PR.createSimpleLexer([["pun",/^[:>?|]+/,a,":|>?"],["dec",/^%(?:YAML|TAG)[^\n\r#]+/,a,"%"],["typ",/^&\S+/,a,"&"],["typ",/^!\S*/,a,"!"],["str",/^"(?:[^"\\]|\\.)*(?:"|$)/,a,'"'],["str",/^'(?:[^']|'')*(?:'|$)/,a,"'"],["com",/^#[^\n\r]*/,a,"#"],["pln",/^\s+/,a," \t\r\n"]],[["dec",/^(?:---|\.\.\.)(?:[\n\r]|$)/],["pun",/^-/],["kwd",/^\w+:[\n\r ]/],["pln",/^\w+/]]),["yaml","yml"]);
3 |
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/docs/site_libs/jqueryui-1.11.4/README:
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1 | This a jQuery UI custom build, downloaded from:
2 | http://jqueryui.com/download/#!version=1.11.4&components=1111111111110111111111111111111111111
3 |
4 | It includes all components except the datepicker, because it conflicts with
5 | bootstrap-datepicker that is packaged with Shiny.
6 |
7 | The copy of jQuery that is bundled with the download, under external/, is not
8 | included because Shiny already has its own copy of jQuery.
9 |
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/docs/site_libs/bootstrap-3.3.5/js/npm.js:
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1 | // This file is autogenerated via the `commonjs` Grunt task. You can require() this file in a CommonJS environment.
2 | require('../../js/transition.js')
3 | require('../../js/alert.js')
4 | require('../../js/button.js')
5 | require('../../js/carousel.js')
6 | require('../../js/collapse.js')
7 | require('../../js/dropdown.js')
8 | require('../../js/modal.js')
9 | require('../../js/tooltip.js')
10 | require('../../js/popover.js')
11 | require('../../js/scrollspy.js')
12 | require('../../js/tab.js')
13 | require('../../js/affix.js')
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/docs/site_libs/header-attrs-2.7/header-attrs.js:
--------------------------------------------------------------------------------
1 | // Pandoc 2.9 adds attributes on both header and div. We remove the former (to
2 | // be compatible with the behavior of Pandoc < 2.8).
3 | document.addEventListener('DOMContentLoaded', function(e) {
4 | var hs = document.querySelectorAll("div.section[class*='level'] > :first-child");
5 | var i, h, a;
6 | for (i = 0; i < hs.length; i++) {
7 | h = hs[i];
8 | if (!/^h[1-6]$/i.test(h.tagName)) continue; // it should be a header h1-h6
9 | a = h.attributes;
10 | while (a.length > 0) h.removeAttribute(a[0].name);
11 | }
12 | });
13 |
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/index.Rmd:
--------------------------------------------------------------------------------
1 | ---
2 | title: "My website"
3 | subtitle: ""
4 | output:
5 | html_document:
6 | toc: true
7 | toc_float: true
8 | toc_depth: 3
9 | ---
10 |
11 | ```{r setup, include=FALSE}
12 | knitr::opts_chunk$set(echo = TRUE)
13 | ```
14 |
15 |
16 |
17 | # Info
18 |
19 | This is just a regular markdown document. You can get rid of the table of contents on the left by setting `toc=false` in the YAML.
20 |
21 | # More info
22 |
23 | And more.
24 |
25 | # And more
26 |
27 | * one
28 |
29 | * two
30 |
31 | * three
32 |
33 |
*This site was last updated at `r format(Sys.time(), "%H:%M")` on `r format(Sys.Date(), "%d %b %Y")`*
34 |
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/docs/site_libs/ioslides-13.5.1/js/prettify/prettify.css:
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1 | .pln{color:#000}@media screen{.str{color:#080}.kwd{color:#008}.com{color:#800}.typ{color:#606}.lit{color:#066}.pun,.opn,.clo{color:#660}.tag{color:#008}.atn{color:#606}.atv{color:#080}.dec,.var{color:#606}.fun{color:red}}@media print,projection{.str{color:#060}.kwd{color:#006;font-weight:bold}.com{color:#600;font-style:italic}.typ{color:#404;font-weight:bold}.lit{color:#044}.pun,.opn,.clo{color:#440}.tag{color:#006;font-weight:bold}.atn{color:#404}.atv{color:#060}}pre.prettyprint{padding:2px;border:1px solid #888}ol.linenums{margin-top:0;margin-bottom:0}li.L0,li.L1,li.L2,li.L3,li.L5,li.L6,li.L7,li.L8{list-style-type:none}li.L1,li.L3,li.L5,li.L7,li.L9{background:#eee}
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/docs/site_libs/ioslides-13.5.1/js/polyfills/dataset.min.js:
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1 | (function(){function c(){d=!0;this.removeEventListener("DOMAttrModified",c,!1)}function g(b){return b.replace(h,function(b,a){return a.toUpperCase()})}function e(){var b={};i.call(this.attributes,function(a){if(f=a.name.match(j))b[g(f[1])]=a.value});return b}var i=[].forEach,j=/^data-(.+)/,h=/\-([a-z])/ig,a=document.createElement("div"),d=!1,f;a.dataset==void 0&&(a.addEventListener("DOMAttrModified",c,!1),a.setAttribute("foo","bar"),Element.prototype.__defineGetter__("dataset",d?function(){if(!this._datasetCache)this._datasetCache=
2 | e.call(this);return this._datasetCache}:e),document.addEventListener("DOMAttrModified",function(a){delete a.target._datasetCache},!1))})();
--------------------------------------------------------------------------------
/.gitignore:
--------------------------------------------------------------------------------
1 | # History files
2 | .Rhistory
3 | .Rapp.history
4 |
5 | # Session Data files
6 | .RData
7 |
8 | # User-specific files
9 | .Ruserdata
10 |
11 | # Example code in package build process
12 | *-Ex.R
13 |
14 | # Output files from R CMD build
15 | /*.tar.gz
16 |
17 | # Output files from R CMD check
18 | /*.Rcheck/
19 |
20 | # RStudio files
21 | .Rproj.user/
22 | */*.Rproj
23 |
24 | # produced vignettes
25 | vignettes/*.html
26 | vignettes/*.pdf
27 |
28 | # OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3
29 | .httr-oauth
30 |
31 | # knitr and R markdown default cache directories
32 | *_cache/
33 | /cache/
34 |
35 | # Temporary files created by R markdown
36 | *.utf8.md
37 | *.knit.md
38 |
39 | # R Environment Variables
40 | .Renviron
41 |
42 | # Mac files
43 | */.DS_Store
44 |
--------------------------------------------------------------------------------
/lecture_1.Rmd:
--------------------------------------------------------------------------------
1 | ---
2 | title: "My Slide Show"
3 | subtitle: "Simple"
4 | author: ""
5 | date: ""
6 | output:
7 | ioslides_presentation:
8 | css: slides.css
9 | ---
10 |
11 | ```{r setup, include=FALSE}
12 | knitr::opts_chunk$set(echo = FALSE)
13 | ```
14 |
15 | ## Topics for today
16 |
17 | ### Characteristics of time series (ts)
18 |
19 | * What is a ts?
20 |
21 | * Classifying ts
22 |
23 | * Trends
24 |
25 | * Seasonality (periodicity)
26 |
27 | ### Classical decomposition
28 |
29 |
30 | ## What is a time series?
31 |
32 | ### A set of observations taken sequentially in time
33 |
34 |
35 | ## What is a time series?
36 |
37 | ### A ts can be represented as a set
38 |
39 | $$
40 | \{ x_1,x_2,x_3,\dots,x_n \}
41 | $$
42 |
43 | ### For example,
44 | $$
45 | \{ 10,31,27,42,53,15 \}
46 | $$
47 |
48 |
49 |
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/docs/site_libs/ioslides-13.5.1/fonts/fonts.css:
--------------------------------------------------------------------------------
1 | @font-face {
2 | font-family: 'Open Sans';
3 | font-style: normal;
4 | font-weight: 400;
5 | src: url(OpenSans.ttf) format('truetype');
6 | }
7 | @font-face {
8 | font-family: 'Open Sans';
9 | font-style: normal;
10 | font-weight: 600;
11 | src: url(OpenSansSemibold.ttf) format('truetype');
12 | }
13 | @font-face {
14 | font-family: 'Open Sans';
15 | font-style: italic;
16 | font-weight: 400;
17 | src: url(OpenSansItalic.ttf) format('truetype');
18 | }
19 | @font-face {
20 | font-family: 'Open Sans';
21 | font-style: italic;
22 | font-weight: 600;
23 | src: url(OpenSansSemiboldItalic.ttf) format('truetype');
24 | }
25 | @font-face {
26 | font-family: 'Source Code Pro';
27 | font-style: normal;
28 | font-weight: 400;
29 | src: url(SourceCodePro.ttf) format('truetype');
30 | }
31 |
--------------------------------------------------------------------------------
/README.md:
--------------------------------------------------------------------------------
1 | # Simple-Website-doc
2 | This is a simple website created from RStudio where the website files are put in the doc folder.
3 |
4 | To set up your own GitHub webpage using this
5 | * Fork the repo to your GitHub account
6 | * Copy the URL of YOUR repo
7 | * Open RStudio
8 | * Select Create New Project (upper right)
9 | * Select 'From Version Control' -> Select from 'Git' -> Paste in the repo URL
10 |
11 | ## To build your website with RStudio
12 |
13 | * Select 'Build' from upper right in RStudio to build the website
14 |
15 | ## To customize
16 |
17 | * Edit the Rmd files
18 | * Add new Rmd files and add to the `_site.yml` file
19 |
20 | ## To make live on GitHub Pages
21 |
22 | * Go into settings on your GitHub repo
23 | * Scroll down to GitHub Pages and select `docs` as your webpage docs
24 | * Don't select a Theme. Just the first dropdown to select `docs`
25 |
26 |
27 |
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/docs/site_libs/ioslides-13.5.1/js/order.js:
--------------------------------------------------------------------------------
1 | /*
2 | RequireJS order 1.0.5 Copyright (c) 2010-2011, The Dojo Foundation All Rights Reserved.
3 | Available via the MIT or new BSD license.
4 | see: http://github.com/jrburke/requirejs for details
5 | */
6 | (function(){function k(a){var b=a.currentTarget||a.srcElement,c;if(a.type==="load"||l.test(b.readyState)){a=b.getAttribute("data-requiremodule");j[a]=!0;for(a=0;c=g[a];a++)if(j[c.name])c.req([c.name],c.onLoad);else break;a>0&&g.splice(0,a);setTimeout(function(){b.parentNode.removeChild(b)},15)}}function m(a){var b,c;a.setAttribute("data-orderloaded","loaded");for(a=0;c=h[a];a++)if((b=i[c])&&b.getAttribute("data-orderloaded")==="loaded")delete i[c],require.addScriptToDom(b);else break;a>0&&h.splice(0,
7 | a)}var f=typeof document!=="undefined"&&typeof window!=="undefined"&&document.createElement("script"),n=f&&(f.async||window.opera&&Object.prototype.toString.call(window.opera)==="[object Opera]"||"MozAppearance"in document.documentElement.style),o=f&&f.readyState==="uninitialized",l=/^(complete|loaded)$/,g=[],j={},i={},h=[],f=null;define({version:"1.0.5",load:function(a,b,c,e){var d;b.nameToUrl?(d=b.nameToUrl(a,null),require.s.skipAsync[d]=!0,n||e.isBuild?b([a],c):o?(e=require.s.contexts._,!e.urlFetched[d]&&
8 | !e.loaded[a]&&(e.urlFetched[d]=!0,require.resourcesReady(!1),e.scriptCount+=1,d=require.attach(d,e,a,null,null,m),i[a]=d,h.push(a)),b([a],c)):b.specified(a)?b([a],c):(g.push({name:a,req:b,onLoad:c}),require.attach(d,null,a,k,"script/cache"))):b([a],c)}})})();
9 |
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/docs/site_libs/ioslides-13.5.1/js/polyfills/classList.min.js:
--------------------------------------------------------------------------------
1 | /* @source http://purl.eligrey.com/github/classList.js/blob/master/classList.js*/
2 | "use strict";if(typeof document!=="undefined"&&!("classList" in document.createElement("a"))){(function(a){var f="classList",d="prototype",e=(a.HTMLElement||a.Element)[d],g=Object;strTrim=String[d].trim||function(){return this.replace(/^\s+|\s+$/g,"")},arrIndexOf=Array[d].indexOf||function(k){for(var j=0,h=this.length;j');
25 | var showThis = (show || $(this).hasClass('fold-show')) && !$(this).hasClass('fold-hide');
26 | if (showThis) div.collapse('show');
27 | var id = 'rcode-643E0F36' + currentIndex++;
28 | div.attr('id', id);
29 | $(this).before(div);
30 | $(this).detach().appendTo(div);
31 |
32 | // add a show code button right above
33 | var showCodeText = $('' + (showThis ? 'Hide' : 'Code') + '');
34 | var showCodeButton = $('');
35 | showCodeButton.append(showCodeText);
36 | showCodeButton
37 | .attr('data-toggle', 'collapse')
38 | .attr('data-target', '#' + id)
39 | .attr('aria-expanded', showThis)
40 | .attr('aria-controls', id);
41 |
42 | var buttonRow = $('');
43 | var buttonCol = $('');
44 |
45 | buttonCol.append(showCodeButton);
46 | buttonRow.append(buttonCol);
47 |
48 | div.before(buttonRow);
49 |
50 | // update state of button on show/hide
51 | div.on('hidden.bs.collapse', function () {
52 | showCodeText.text('Code');
53 | });
54 | div.on('show.bs.collapse', function () {
55 | showCodeText.text('Hide');
56 | });
57 | });
58 |
59 | }
60 |
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/docs/site_libs/tocify-1.9.1/jquery.tocify.css:
--------------------------------------------------------------------------------
1 | /*
2 | * jquery.tocify.css 1.9.1
3 | * Author: @gregfranko
4 | */
5 |
6 | /* The Table of Contents container element */
7 | .tocify {
8 | width: 20%;
9 | max-height: 90%;
10 | overflow: auto;
11 | margin-left: 2%;
12 | position: fixed;
13 | border: 1px solid #ccc;
14 | border-radius: 6px;
15 | }
16 |
17 | /* The Table of Contents is composed of multiple nested unordered lists. These styles remove the default styling of an unordered list because it is ugly. */
18 | .tocify ul, .tocify li {
19 | list-style: none;
20 | margin: 0;
21 | padding: 0;
22 | border: none;
23 | line-height: 30px;
24 | }
25 |
26 | /* Top level header elements */
27 | .tocify-header {
28 | text-indent: 10px;
29 | }
30 |
31 | /* Top level subheader elements. These are the first nested items underneath a header element. */
32 | .tocify-subheader {
33 | text-indent: 20px;
34 | display: none;
35 | }
36 |
37 | /* Makes the font smaller for all subheader elements. */
38 | .tocify-subheader li {
39 | font-size: 12px;
40 | }
41 |
42 | /* Further indents second level subheader elements. */
43 | .tocify-subheader .tocify-subheader {
44 | text-indent: 30px;
45 | }
46 | .tocify-subheader .tocify-subheader .tocify-subheader {
47 | text-indent: 40px;
48 | }
49 | .tocify-subheader .tocify-subheader .tocify-subheader .tocify-subheader {
50 | text-indent: 50px;
51 | }
52 | .tocify-subheader .tocify-subheader .tocify-subheader .tocify-subheader .tocify-subheader {
53 | text-indent: 60px;
54 | }
55 |
56 | /* Twitter Bootstrap Override Style */
57 | .tocify .tocify-item > a, .tocify .nav-list .nav-header {
58 | margin: 0px;
59 | }
60 |
61 | /* Twitter Bootstrap Override Styles */
62 | .tocify .tocify-item a, .tocify .list-group-item {
63 | padding: 5px;
64 | }
65 |
66 | .tocify .nav-pills > li {
67 | float: none;
68 | }
69 |
70 | /* We don't override the bootstrap colors because this gives us the
71 | wrong selection colors when using bootstrap themes
72 |
73 | .tocify .list-group-item:hover, .tocify .list-group-item:focus {
74 | background-color: #f5f5f5;
75 | }
76 |
77 | .tocify .list-group-item.active:hover, .tocify .list-group-item.active:focus {
78 | background-color: #428bca;
79 | }
80 | */
81 |
82 | /* End Twitter Bootstrap Override Styles */
83 |
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/docs/site_libs/ioslides-13.5.1/js/prettify/lang-r.js:
--------------------------------------------------------------------------------
1 | // Copyright (C) 2012 Jeffrey B. Arnold
2 | //
3 | // Licensed under the Apache License, Version 2.0 (the "License");
4 | // you may not use this file except in compliance with the License.
5 | // You may obtain a copy of the License at
6 | //
7 | // http://www.apache.org/licenses/LICENSE-2.0
8 | //
9 | // Unless required by applicable law or agreed to in writing, software
10 | // distributed under the License is distributed on an "AS IS" BASIS,
11 | // WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12 | // See the License for the specific language governing permissions and
13 | // limitations under the License.
14 |
15 |
16 | /**
17 | * @fileoverview
18 | * Registers a language handler for S, S-plus, and R source code.
19 | *
20 | *
21 | * To use, include prettify.js and this file in your HTML page.
22 | * Then put your code in an HTML tag like
23 | * code
24 | *
25 | * Language definition from
26 | * http://cran.r-project.org/doc/manuals/R-lang.html.
27 | * Many of the regexes are shared with the pygments SLexer,
28 | * http://pygments.org/.
29 | *
30 | * Original: https://raw.github.com/jrnold/prettify-lang-r-bugs/master/lang-r.js
31 | *
32 | * @author jeffrey.arnold@gmail.com
33 | */
34 | PR['registerLangHandler'](
35 | PR['createSimpleLexer'](
36 | [
37 | [PR['PR_PLAIN'], /^[\t\n\r \xA0]+/, null, '\t\n\r \xA0'],
38 | [PR['PR_STRING'], /^\"(?:[^\"\\]|\\[\s\S])*(?:\"|$)/, null, '"'],
39 | [PR['PR_STRING'], /^\'(?:[^\'\\]|\\[\s\S])*(?:\'|$)/, null, "'"]
40 | ],
41 | [
42 | [PR['PR_COMMENT'], /^#.*/],
43 | [PR['PR_KEYWORD'], /^(?:if|else|for|while|repeat|in|next|break|return|switch|function)(?![A-Za-z0-9_.])/],
44 | // hex numbes
45 | [PR['PR_LITERAL'], /^0[xX][a-fA-F0-9]+([pP][0-9]+)?[Li]?/],
46 | // Decimal numbers
47 | [PR['PR_LITERAL'], /^[+-]?([0-9]+(\.[0-9]+)?|\.[0-9]+)([eE][+-]?[0-9]+)?[Li]?/],
48 | // builtin symbols
49 | [PR['PR_LITERAL'], /^(?:NULL|NA(?:_(?:integer|real|complex|character)_)?|Inf|TRUE|FALSE|NaN|\.\.(?:\.|[0-9]+))(?![A-Za-z0-9_.])/],
50 | // assignment, operators, and parens, etc.
51 | [PR['PR_PUNCTUATION'], /^(?:<-|->>?|-|==|<=|>=|<|>|&&?|!=|\|\|?|\*|\+|\^|\/|!|%.*?%|=|~|\$|@|:{1,3}|[\[\](){};,?])/],
52 | // valid variable names
53 | [PR['PR_PLAIN'], /^(?:[A-Za-z]+[A-Za-z0-9_.]*|\.[a-zA-Z_][0-9a-zA-Z\._]*)(?![A-Za-z0-9_.])/],
54 | // string backtick
55 | [PR['PR_STRING'], /^`.+`/]
56 | ]),
57 | ['r', 's', 'R', 'S', 'Splus']);
58 |
--------------------------------------------------------------------------------
/docs/site_libs/bootstrap-3.3.5/shim/html5shiv.min.js:
--------------------------------------------------------------------------------
1 | /**
2 | * @preserve HTML5 Shiv 3.7.2 | @afarkas @jdalton @jon_neal @rem | MIT/GPL2 Licensed
3 | */
4 | // Only run this code in IE 8
5 | if (!!window.navigator.userAgent.match("MSIE 8")) {
6 | !function(a,b){function c(a,b){var c=a.createElement("p"),d=a.getElementsByTagName("head")[0]||a.documentElement;return c.innerHTML="x",d.insertBefore(c.lastChild,d.firstChild)}function d(){var a=t.elements;return"string"==typeof a?a.split(" "):a}function e(a,b){var c=t.elements;"string"!=typeof c&&(c=c.join(" ")),"string"!=typeof a&&(a=a.join(" ")),t.elements=c+" "+a,j(b)}function f(a){var b=s[a[q]];return b||(b={},r++,a[q]=r,s[r]=b),b}function g(a,c,d){if(c||(c=b),l)return c.createElement(a);d||(d=f(c));var e;return e=d.cache[a]?d.cache[a].cloneNode():p.test(a)?(d.cache[a]=d.createElem(a)).cloneNode():d.createElem(a),!e.canHaveChildren||o.test(a)||e.tagUrn?e:d.frag.appendChild(e)}function h(a,c){if(a||(a=b),l)return a.createDocumentFragment();c=c||f(a);for(var e=c.frag.cloneNode(),g=0,h=d(),i=h.length;i>g;g++)e.createElement(h[g]);return e}function i(a,b){b.cache||(b.cache={},b.createElem=a.createElement,b.createFrag=a.createDocumentFragment,b.frag=b.createFrag()),a.createElement=function(c){return t.shivMethods?g(c,a,b):b.createElem(c)},a.createDocumentFragment=Function("h,f","return function(){var n=f.cloneNode(),c=n.createElement;h.shivMethods&&("+d().join().replace(/[\w\-:]+/g,function(a){return b.createElem(a),b.frag.createElement(a),'c("'+a+'")'})+");return n}")(t,b.frag)}function j(a){a||(a=b);var d=f(a);return!t.shivCSS||k||d.hasCSS||(d.hasCSS=!!c(a,"article,aside,dialog,figcaption,figure,footer,header,hgroup,main,nav,section{display:block}mark{background:#FF0;color:#000}template{display:none}")),l||i(a,d),a}var k,l,m="3.7.2",n=a.html5||{},o=/^<|^(?:button|map|select|textarea|object|iframe|option|optgroup)$/i,p=/^(?:a|b|code|div|fieldset|h1|h2|h3|h4|h5|h6|i|label|li|ol|p|q|span|strong|style|table|tbody|td|th|tr|ul)$/i,q="_html5shiv",r=0,s={};!function(){try{var a=b.createElement("a");a.innerHTML="",k="hidden"in a,l=1==a.childNodes.length||function(){b.createElement("a");var a=b.createDocumentFragment();return"undefined"==typeof a.cloneNode||"undefined"==typeof a.createDocumentFragment||"undefined"==typeof a.createElement}()}catch(c){k=!0,l=!0}}();var t={elements:n.elements||"abbr article aside audio bdi canvas data datalist details dialog figcaption figure footer header hgroup main mark meter nav output picture progress section summary template time video",version:m,shivCSS:n.shivCSS!==!1,supportsUnknownElements:l,shivMethods:n.shivMethods!==!1,type:"default",shivDocument:j,createElement:g,createDocumentFragment:h,addElements:e};a.html5=t,j(b)}(this,document);
7 | };
8 |
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/docs/site_libs/ioslides-13.5.1/js/slide-controller.js:
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1 | (function(window) {
2 |
3 | var ORIGIN_ = location.protocol + '//' + location.host;
4 |
5 | // check for local storage
6 | var haveLocalStorage = (function() {
7 | var mod = 'mod';
8 | try {
9 | localStorage.setItem(mod, mod);
10 | localStorage.removeItem(mod);
11 | return true;
12 | } catch(e) {
13 | return false;
14 | }
15 | }());
16 |
17 | function SlideController() {
18 | this.popup = null;
19 | this.isPopup = window.opener;
20 |
21 | if (this.setupDone()) {
22 | window.addEventListener('message', this.onMessage_.bind(this), false);
23 |
24 | // Close popups if we reload the main window.
25 | window.addEventListener('beforeunload', function(e) {
26 | if (this.popup) {
27 | this.popup.close();
28 | }
29 | }.bind(this), false);
30 | }
31 | }
32 |
33 | SlideController.PRESENTER_MODE_PARAM = 'presentme';
34 |
35 | SlideController.prototype.setupDone = function() {
36 | var params = location.search.substring(1).split('&').map(function(el) {
37 | return el.split('=');
38 | });
39 |
40 | var presentMe = null;
41 | for (var i = 0, param; param = params[i]; ++i) {
42 | if (param[0].toLowerCase() == SlideController.PRESENTER_MODE_PARAM) {
43 | presentMe = param[1] == 'true';
44 | break;
45 | }
46 | }
47 |
48 | if (presentMe !== null) {
49 | if (haveLocalStorage)
50 | localStorage.ENABLE_PRESENTOR_MODE = presentMe;
51 | // TODO: use window.history.pushState to update URL instead of the redirect.
52 | if (window.history.replaceState) {
53 | window.history.replaceState({}, '', location.pathname);
54 | } else {
55 | location.replace(location.pathname);
56 | return false;
57 | }
58 | }
59 |
60 | var enablePresenterMode = haveLocalStorage && localStorage.getItem('ENABLE_PRESENTOR_MODE');
61 | if (enablePresenterMode && JSON.parse(enablePresenterMode)) {
62 | // Only open popup from main deck. Don't want recursive popup opening!
63 | if (!this.isPopup) {
64 | var opts = 'menubar=no,location=yes,resizable=yes,scrollbars=no,status=no';
65 | this.popup = window.open(location.href, 'mywindow', opts);
66 |
67 | // Loading in the popup? Trigger the hotkey for turning presenter mode on.
68 | this.popup.addEventListener('load', function(e) {
69 | var evt = this.popup.document.createEvent('Event');
70 | evt.initEvent('keydown', true, true);
71 | evt.keyCode = 'P'.charCodeAt(0);
72 | this.popup.document.dispatchEvent(evt);
73 | // this.popup.document.body.classList.add('with-notes');
74 | // document.body.classList.add('popup');
75 | }.bind(this), false);
76 | }
77 | }
78 |
79 | return true;
80 | }
81 |
82 | SlideController.prototype.onMessage_ = function(e) {
83 | var data = e.data;
84 |
85 | // Restrict messages to being from this origin. Allow local developmet
86 | // from file:// though.
87 | // TODO: It would be dope if FF implemented location.origin!
88 | if (e.origin != ORIGIN_ && ORIGIN_.indexOf('file://') != 0) {
89 | // Ignore messages from unrecognized origins
90 | return;
91 | }
92 |
93 | // if (e.source.location.hostname != 'localhost') {
94 | // alert('Someone tried to postMessage from an unknown origin');
95 | // return;
96 | // }
97 |
98 | if ('keyCode' in data) {
99 | var evt = document.createEvent('Event');
100 | evt.initEvent('keydown', true, true);
101 | evt.keyCode = data.keyCode;
102 | document.dispatchEvent(evt);
103 | }
104 | };
105 |
106 | SlideController.prototype.sendMsg = function(msg) {
107 | // // Send message to popup window.
108 | // if (this.popup) {
109 | // this.popup.postMessage(msg, ORIGIN_);
110 | // }
111 |
112 | // Send message to main window.
113 | if (this.isPopup) {
114 | // TODO: It would be dope if FF implemented location.origin.
115 | window.opener.postMessage(msg, '*');
116 | }
117 | };
118 |
119 | window.SlideController = SlideController;
120 |
121 | })(window);
122 |
123 |
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/docs/site_libs/bootstrap-3.3.5/shim/respond.min.js:
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1 | /*! Respond.js v1.4.2: min/max-width media query polyfill * Copyright 2013 Scott Jehl
2 | * Licensed under https://github.com/scottjehl/Respond/blob/master/LICENSE-MIT
3 | * */
4 |
5 | // Only run this code in IE 8
6 | if (!!window.navigator.userAgent.match("MSIE 8")) {
7 | !function(a){"use strict";a.matchMedia=a.matchMedia||function(a){var b,c=a.documentElement,d=c.firstElementChild||c.firstChild,e=a.createElement("body"),f=a.createElement("div");return f.id="mq-test-1",f.style.cssText="position:absolute;top:-100em",e.style.background="none",e.appendChild(f),function(a){return f.innerHTML='',c.insertBefore(e,d),b=42===f.offsetWidth,c.removeChild(e),{matches:b,media:a}}}(a.document)}(this),function(a){"use strict";function b(){u(!0)}var c={};a.respond=c,c.update=function(){};var d=[],e=function(){var b=!1;try{b=new a.XMLHttpRequest}catch(c){b=new a.ActiveXObject("Microsoft.XMLHTTP")}return function(){return b}}(),f=function(a,b){var c=e();c&&(c.open("GET",a,!0),c.onreadystatechange=function(){4!==c.readyState||200!==c.status&&304!==c.status||b(c.responseText)},4!==c.readyState&&c.send(null))};if(c.ajax=f,c.queue=d,c.regex={media:/@media[^\{]+\{([^\{\}]*\{[^\}\{]*\})+/gi,keyframes:/@(?:\-(?:o|moz|webkit)\-)?keyframes[^\{]+\{(?:[^\{\}]*\{[^\}\{]*\})+[^\}]*\}/gi,urls:/(url\()['"]?([^\/\)'"][^:\)'"]+)['"]?(\))/g,findStyles:/@media *([^\{]+)\{([\S\s]+?)$/,only:/(only\s+)?([a-zA-Z]+)\s?/,minw:/\([\s]*min\-width\s*:[\s]*([\s]*[0-9\.]+)(px|em)[\s]*\)/,maxw:/\([\s]*max\-width\s*:[\s]*([\s]*[0-9\.]+)(px|em)[\s]*\)/},c.mediaQueriesSupported=a.matchMedia&&null!==a.matchMedia("only all")&&a.matchMedia("only all").matches,!c.mediaQueriesSupported){var g,h,i,j=a.document,k=j.documentElement,l=[],m=[],n=[],o={},p=30,q=j.getElementsByTagName("head")[0]||k,r=j.getElementsByTagName("base")[0],s=q.getElementsByTagName("link"),t=function(){var a,b=j.createElement("div"),c=j.body,d=k.style.fontSize,e=c&&c.style.fontSize,f=!1;return b.style.cssText="position:absolute;font-size:1em;width:1em",c||(c=f=j.createElement("body"),c.style.background="none"),k.style.fontSize="100%",c.style.fontSize="100%",c.appendChild(b),f&&k.insertBefore(c,k.firstChild),a=b.offsetWidth,f?k.removeChild(c):c.removeChild(b),k.style.fontSize=d,e&&(c.style.fontSize=e),a=i=parseFloat(a)},u=function(b){var c="clientWidth",d=k[c],e="CSS1Compat"===j.compatMode&&d||j.body[c]||d,f={},o=s[s.length-1],r=(new Date).getTime();if(b&&g&&p>r-g)return a.clearTimeout(h),h=a.setTimeout(u,p),void 0;g=r;for(var v in l)if(l.hasOwnProperty(v)){var w=l[v],x=w.minw,y=w.maxw,z=null===x,A=null===y,B="em";x&&(x=parseFloat(x)*(x.indexOf(B)>-1?i||t():1)),y&&(y=parseFloat(y)*(y.indexOf(B)>-1?i||t():1)),w.hasquery&&(z&&A||!(z||e>=x)||!(A||y>=e))||(f[w.media]||(f[w.media]=[]),f[w.media].push(m[w.rules]))}for(var C in n)n.hasOwnProperty(C)&&n[C]&&n[C].parentNode===q&&q.removeChild(n[C]);n.length=0;for(var D in f)if(f.hasOwnProperty(D)){var E=j.createElement("style"),F=f[D].join("\n");E.type="text/css",E.media=D,q.insertBefore(E,o.nextSibling),E.styleSheet?E.styleSheet.cssText=F:E.appendChild(j.createTextNode(F)),n.push(E)}},v=function(a,b,d){var e=a.replace(c.regex.keyframes,"").match(c.regex.media),f=e&&e.length||0;b=b.substring(0,b.lastIndexOf("/"));var g=function(a){return a.replace(c.regex.urls,"$1"+b+"$2$3")},h=!f&&d;b.length&&(b+="/"),h&&(f=1);for(var i=0;f>i;i++){var j,k,n,o;h?(j=d,m.push(g(a))):(j=e[i].match(c.regex.findStyles)&&RegExp.$1,m.push(RegExp.$2&&g(RegExp.$2))),n=j.split(","),o=n.length;for(var p=0;o>p;p++)k=n[p],l.push({media:k.split("(")[0].match(c.regex.only)&&RegExp.$2||"all",rules:m.length-1,hasquery:k.indexOf("(")>-1,minw:k.match(c.regex.minw)&&parseFloat(RegExp.$1)+(RegExp.$2||""),maxw:k.match(c.regex.maxw)&&parseFloat(RegExp.$1)+(RegExp.$2||"")})}u()},w=function(){if(d.length){var b=d.shift();f(b.href,function(c){v(c,b.href,b.media),o[b.href]=!0,a.setTimeout(function(){w()},0)})}},x=function(){for(var b=0;b
7 | * adapted by Ruben Arslan to activate parent tabs too
8 | * http://www.aidanlister.com/2014/03/persisting-the-tab-state-in-bootstrap/
9 | */
10 | (function($) {
11 | "use strict";
12 | $.fn.rmarkdownStickyTabs = function() {
13 | var context = this;
14 | // Show the tab corresponding with the hash in the URL, or the first tab
15 | var showStuffFromHash = function() {
16 | var hash = window.location.hash;
17 | var selector = hash ? 'a[href="' + hash + '"]' : 'li.active > a';
18 | var $selector = $(selector, context);
19 | if($selector.data('toggle') === "tab") {
20 | $selector.tab('show');
21 | // walk up the ancestors of this element, show any hidden tabs
22 | $selector.parents('.section.tabset').each(function(i, elm) {
23 | var link = $('a[href="#' + $(elm).attr('id') + '"]');
24 | if(link.data('toggle') === "tab") {
25 | link.tab("show");
26 | }
27 | });
28 | }
29 | };
30 |
31 |
32 | // Set the correct tab when the page loads
33 | showStuffFromHash(context);
34 |
35 | // Set the correct tab when a user uses their back/forward button
36 | $(window).on('hashchange', function() {
37 | showStuffFromHash(context);
38 | });
39 |
40 | // Change the URL when tabs are clicked
41 | $('a', context).on('click', function(e) {
42 | history.pushState(null, null, this.href);
43 | showStuffFromHash(context);
44 | });
45 |
46 | return this;
47 | };
48 | }(jQuery));
49 |
50 | window.buildTabsets = function(tocID) {
51 |
52 | // build a tabset from a section div with the .tabset class
53 | function buildTabset(tabset) {
54 |
55 | // check for fade and pills options
56 | var fade = tabset.hasClass("tabset-fade");
57 | var pills = tabset.hasClass("tabset-pills");
58 | var navClass = pills ? "nav-pills" : "nav-tabs";
59 |
60 | // determine the heading level of the tabset and tabs
61 | var match = tabset.attr('class').match(/level(\d) /);
62 | if (match === null)
63 | return;
64 | var tabsetLevel = Number(match[1]);
65 | var tabLevel = tabsetLevel + 1;
66 |
67 | // find all subheadings immediately below
68 | var tabs = tabset.find("div.section.level" + tabLevel);
69 | if (!tabs.length)
70 | return;
71 |
72 | // create tablist and tab-content elements
73 | var tabList = $('');
74 | $(tabs[0]).before(tabList);
75 | var tabContent = $('');
76 | $(tabs[0]).before(tabContent);
77 |
78 | // build the tabset
79 | var activeTab = 0;
80 | tabs.each(function(i) {
81 |
82 | // get the tab div
83 | var tab = $(tabs[i]);
84 |
85 | // get the id then sanitize it for use with bootstrap tabs
86 | var id = tab.attr('id');
87 |
88 | // see if this is marked as the active tab
89 | if (tab.hasClass('active'))
90 | activeTab = i;
91 |
92 | // remove any table of contents entries associated with
93 | // this ID (since we'll be removing the heading element)
94 | $("div#" + tocID + " li a[href='#" + id + "']").parent().remove();
95 |
96 | // sanitize the id for use with bootstrap tabs
97 | id = id.replace(/[.\/?&!#<>]/g, '').replace(/\s/g, '_');
98 | tab.attr('id', id);
99 |
100 | // get the heading element within it, grab it's text, then remove it
101 | var heading = tab.find('h' + tabLevel + ':first');
102 | var headingText = heading.html();
103 | heading.remove();
104 |
105 | // build and append the tab list item
106 | var a = $('' + headingText + '');
107 | a.attr('href', '#' + id);
108 | a.attr('aria-controls', id);
109 | var li = $('');
110 | li.append(a);
111 | tabList.append(li);
112 |
113 | // set it's attributes
114 | tab.attr('role', 'tabpanel');
115 | tab.addClass('tab-pane');
116 | tab.addClass('tabbed-pane');
117 | if (fade)
118 | tab.addClass('fade');
119 |
120 | // move it into the tab content div
121 | tab.detach().appendTo(tabContent);
122 | });
123 |
124 | // set active tab
125 | $(tabList.children('li')[activeTab]).addClass('active');
126 | var active = $(tabContent.children('div.section')[activeTab]);
127 | active.addClass('active');
128 | if (fade)
129 | active.addClass('in');
130 |
131 | if (tabset.hasClass("tabset-sticky"))
132 | tabset.rmarkdownStickyTabs();
133 | }
134 |
135 | // convert section divs with the .tabset class to tabsets
136 | var tabsets = $("div.section.tabset");
137 | tabsets.each(function(i) {
138 | buildTabset($(tabsets[i]));
139 | });
140 | };
141 |
142 |
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/docs/lecture_1.html:
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1 |
2 |
3 |
4 | My Slide Show
5 |
6 |
7 |
8 |
9 |
10 |
11 |
12 |
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14 |
15 |
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112 |
113 |
114 |
115 |
116 | Topics for today
117 |
118 | Characteristics of time series (ts)
119 |
120 |
126 |
127 | Classical decomposition
128 |
129 | What is a time series?
130 |
131 | A set of observations taken sequentially in time
132 |
133 | What is a time series?
134 |
135 | A ts can be represented as a set
136 |
137 | \[
138 | \{ x_1,x_2,x_3,\dots,x_n \}
139 | \]
140 |
141 | For example,
142 |
143 | \[
144 | \{ 10,31,27,42,53,15 \}
145 | \]
146 |
147 |
148 |
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14 | Lecture presentations
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/docs/site_libs/jqueryui-1.11.4/jquery-ui.structure.min.css:
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1 | /*! jQuery UI - v1.11.4 - 2016-01-05
2 | * http://jqueryui.com
3 | * Copyright jQuery Foundation and other contributors; Licensed MIT */
4 |
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/docs/site_libs/jqueryui-1.11.4/jquery-ui.theme.min.css:
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1 | /*! jQuery UI - v1.11.4 - 2016-01-05
2 | * http://jqueryui.com
3 | * Copyright jQuery Foundation and other contributors; Licensed MIT */
4 |
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1 | /* Modernizr 2.5.3 (Custom Build) | MIT & BSD
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