├── .Rbuildignore ├── .github ├── .gitignore └── workflows │ ├── R-CMD-check.yaml │ └── pkgdown.yaml ├── .gitignore ├── .lintr ├── DESCRIPTION ├── LICENSE.md ├── NAMESPACE ├── NEWS.md ├── R ├── data.R ├── globals.R ├── si_model.R ├── si_to_od.R └── simodels-package.R ├── README.md ├── README.qmd ├── _pkgdown.yml ├── cran-comments.md ├── data-raw ├── .gitignore ├── schools_york.qmd ├── si-classes.Rmd ├── si-classes.md ├── si_model.R ├── si_oa_wpz.qmd ├── si_oa_wpz_files │ └── figure-html │ │ ├── od-destination-1.png │ │ ├── od-origin-destination-1.png │ │ ├── unnamed-chunk-2-1.png │ │ └── unnamed-chunk-3-1.png ├── test-si-to-od.qmd ├── zones.R └── zones_york.qmd ├── data ├── destinations_york.rda ├── od_aus.rda ├── si_centroids.rda ├── si_oa_wpz.rda ├── si_oa_wpz_d.rda ├── si_oa_wpz_o.rda ├── si_od_census.rda ├── si_pubs.rda ├── si_zones.rda ├── zones_aus.rda └── zones_york.rda ├── man ├── destinations_york.Rd ├── figures │ ├── README-distance-1.png │ ├── README-map-1.png │ └── README-pubmap-1.png ├── od_aus.Rd ├── si_calculate.Rd ├── si_oa_wpz.Rd ├── si_oa_wpz_d.Rd ├── si_oa_wpz_o.Rd ├── si_od_census.Rd ├── si_predict.Rd ├── si_pubs.Rd ├── si_to_od.Rd ├── si_zones.Rd ├── simodels-package.Rd ├── zones_aus.Rd └── zones_york.Rd ├── paper ├── .gitignore ├── bibliography.bib ├── jss.bst ├── jss.cls ├── jsslogo.jpg └── paper.qmd ├── simodels.Rproj └── vignettes ├── .gitignore ├── articles └── validation.Rmd ├── references.bib ├── simodels.Rmd └── sims-first-principles.Rmd /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.github/.gitignore: -------------------------------------------------------------------------------- 1 | *.html 2 | -------------------------------------------------------------------------------- /.github/workflows/R-CMD-check.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/.github/workflows/R-CMD-check.yaml -------------------------------------------------------------------------------- /.github/workflows/pkgdown.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/.github/workflows/pkgdown.yaml -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/.gitignore -------------------------------------------------------------------------------- /.lintr: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/.lintr -------------------------------------------------------------------------------- /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /LICENSE.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/LICENSE.md -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/NAMESPACE -------------------------------------------------------------------------------- /NEWS.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/NEWS.md -------------------------------------------------------------------------------- /R/data.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/R/data.R -------------------------------------------------------------------------------- /R/globals.R: -------------------------------------------------------------------------------- 1 | utils::globalVariables(c(":=", "distance_euclidean")) 2 | -------------------------------------------------------------------------------- /R/si_model.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/R/si_model.R -------------------------------------------------------------------------------- /R/si_to_od.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/R/si_to_od.R -------------------------------------------------------------------------------- /R/simodels-package.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/R/simodels-package.R -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/README.md -------------------------------------------------------------------------------- /README.qmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/README.qmd -------------------------------------------------------------------------------- /_pkgdown.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/_pkgdown.yml -------------------------------------------------------------------------------- /cran-comments.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/cran-comments.md -------------------------------------------------------------------------------- /data-raw/.gitignore: -------------------------------------------------------------------------------- 1 | /.quarto/ 2 | -------------------------------------------------------------------------------- /data-raw/schools_york.qmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data-raw/schools_york.qmd -------------------------------------------------------------------------------- /data-raw/si-classes.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data-raw/si-classes.Rmd -------------------------------------------------------------------------------- /data-raw/si-classes.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data-raw/si-classes.md -------------------------------------------------------------------------------- /data-raw/si_model.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data-raw/si_model.R -------------------------------------------------------------------------------- /data-raw/si_oa_wpz.qmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data-raw/si_oa_wpz.qmd -------------------------------------------------------------------------------- /data-raw/si_oa_wpz_files/figure-html/od-destination-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data-raw/si_oa_wpz_files/figure-html/od-destination-1.png -------------------------------------------------------------------------------- /data-raw/si_oa_wpz_files/figure-html/od-origin-destination-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data-raw/si_oa_wpz_files/figure-html/od-origin-destination-1.png -------------------------------------------------------------------------------- /data-raw/si_oa_wpz_files/figure-html/unnamed-chunk-2-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data-raw/si_oa_wpz_files/figure-html/unnamed-chunk-2-1.png -------------------------------------------------------------------------------- /data-raw/si_oa_wpz_files/figure-html/unnamed-chunk-3-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data-raw/si_oa_wpz_files/figure-html/unnamed-chunk-3-1.png -------------------------------------------------------------------------------- /data-raw/test-si-to-od.qmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data-raw/test-si-to-od.qmd -------------------------------------------------------------------------------- /data-raw/zones.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data-raw/zones.R -------------------------------------------------------------------------------- /data-raw/zones_york.qmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data-raw/zones_york.qmd -------------------------------------------------------------------------------- /data/destinations_york.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data/destinations_york.rda -------------------------------------------------------------------------------- /data/od_aus.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data/od_aus.rda -------------------------------------------------------------------------------- /data/si_centroids.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data/si_centroids.rda -------------------------------------------------------------------------------- /data/si_oa_wpz.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data/si_oa_wpz.rda -------------------------------------------------------------------------------- /data/si_oa_wpz_d.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data/si_oa_wpz_d.rda -------------------------------------------------------------------------------- /data/si_oa_wpz_o.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data/si_oa_wpz_o.rda -------------------------------------------------------------------------------- /data/si_od_census.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data/si_od_census.rda -------------------------------------------------------------------------------- /data/si_pubs.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data/si_pubs.rda -------------------------------------------------------------------------------- /data/si_zones.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data/si_zones.rda -------------------------------------------------------------------------------- /data/zones_aus.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data/zones_aus.rda -------------------------------------------------------------------------------- /data/zones_york.rda: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/data/zones_york.rda -------------------------------------------------------------------------------- /man/destinations_york.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/destinations_york.Rd -------------------------------------------------------------------------------- /man/figures/README-distance-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/figures/README-distance-1.png -------------------------------------------------------------------------------- /man/figures/README-map-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/figures/README-map-1.png -------------------------------------------------------------------------------- /man/figures/README-pubmap-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/figures/README-pubmap-1.png -------------------------------------------------------------------------------- /man/od_aus.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/od_aus.Rd -------------------------------------------------------------------------------- /man/si_calculate.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/si_calculate.Rd -------------------------------------------------------------------------------- /man/si_oa_wpz.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/si_oa_wpz.Rd -------------------------------------------------------------------------------- /man/si_oa_wpz_d.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/si_oa_wpz_d.Rd -------------------------------------------------------------------------------- /man/si_oa_wpz_o.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/si_oa_wpz_o.Rd -------------------------------------------------------------------------------- /man/si_od_census.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/si_od_census.Rd -------------------------------------------------------------------------------- /man/si_predict.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/si_predict.Rd -------------------------------------------------------------------------------- /man/si_pubs.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/si_pubs.Rd -------------------------------------------------------------------------------- /man/si_to_od.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/si_to_od.Rd -------------------------------------------------------------------------------- /man/si_zones.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/si_zones.Rd -------------------------------------------------------------------------------- /man/simodels-package.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/simodels-package.Rd -------------------------------------------------------------------------------- /man/zones_aus.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/zones_aus.Rd -------------------------------------------------------------------------------- /man/zones_york.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/man/zones_york.Rd -------------------------------------------------------------------------------- /paper/.gitignore: -------------------------------------------------------------------------------- 1 | /.quarto/ 2 | _extensions/ 3 | *.pdf 4 | *.tex 5 | -------------------------------------------------------------------------------- /paper/bibliography.bib: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/paper/bibliography.bib -------------------------------------------------------------------------------- /paper/jss.bst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/paper/jss.bst -------------------------------------------------------------------------------- /paper/jss.cls: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/paper/jss.cls -------------------------------------------------------------------------------- /paper/jsslogo.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/paper/jsslogo.jpg -------------------------------------------------------------------------------- /paper/paper.qmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/paper/paper.qmd -------------------------------------------------------------------------------- /simodels.Rproj: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/simodels.Rproj -------------------------------------------------------------------------------- /vignettes/.gitignore: -------------------------------------------------------------------------------- 1 | *.html 2 | *.R 3 | -------------------------------------------------------------------------------- /vignettes/articles/validation.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/vignettes/articles/validation.Rmd -------------------------------------------------------------------------------- /vignettes/references.bib: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/vignettes/references.bib -------------------------------------------------------------------------------- /vignettes/simodels.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/vignettes/simodels.Rmd -------------------------------------------------------------------------------- /vignettes/sims-first-principles.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Robinlovelace/simodels/HEAD/vignettes/sims-first-principles.Rmd --------------------------------------------------------------------------------