├── README.md ├── medst ├── constants.py ├── datasets │ ├── classification_dataset.py │ ├── data_module.py │ ├── image_process.py │ ├── pretrain_dataset.py │ ├── transforms.py │ └── utils.py ├── emilyalsentzer │ └── Bio_ClinicalBERT │ │ ├── config.json │ │ └── vocab.txt ├── models │ ├── backbones │ │ ├── cnn_backbones.py │ │ ├── detector_backbone.py │ │ ├── encoder.py │ │ ├── med.py │ │ ├── transformer_model.py │ │ ├── transformer_seg.py │ │ └── vits.py │ ├── medst │ │ ├── medst_finetuner.py │ │ ├── medst_module.py │ │ ├── run_cls_covidx.sh │ │ ├── temporal_alignment.py │ │ ├── temporal_test.py │ │ └── zeroshot_RSNA.py │ └── ssl_finetuner.py ├── preprocess │ ├── covidx.py │ ├── mimic_cxr.py │ ├── rsna.py │ └── utils.py └── utils │ └── cosine_annealing_warmup.py └── requirements.txt /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SVT-Yang/MedST/HEAD/README.md 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