├── .gitignore ├── .readthedocs.yml ├── .travis.yml ├── CODE_OF_CONDUCT.md ├── CONTRIBUTING.md ├── LICENSE ├── Pipfile ├── README.md ├── docs ├── Makefile ├── about.rst ├── conf.py ├── databases.rst ├── examples.rst ├── html │ ├── .buildinfo │ ├── .doctrees │ │ ├── about.doctree │ │ ├── databases.doctree │ │ ├── environment.pickle │ │ ├── examples.doctree │ │ ├── index.doctree │ │ ├── installation.doctree │ │ ├── methods.doctree │ │ ├── network.doctree │ │ └── utils.doctree │ ├── _sources │ │ ├── about.rst.txt │ │ ├── databases.rst.txt │ │ ├── examples.rst.txt │ │ ├── index.rst.txt │ │ ├── installation.rst.txt │ │ ├── methods.rst.txt │ │ ├── network.rst.txt │ │ └── utils.rst.txt │ ├── _static │ │ ├── _sphinx_javascript_frameworks_compat.js │ │ ├── alabaster.css │ │ ├── basic.css │ │ ├── custom.css │ │ ├── doctools.js │ │ ├── documentation_options.js │ │ ├── file.png │ │ ├── jquery-3.6.0.js │ │ ├── jquery.js │ │ ├── language_data.js │ │ ├── minus.png │ │ ├── plus.png │ │ ├── pygments.css │ │ ├── searchtools.js │ │ ├── sphinx_highlight.js │ │ ├── underscore-1.13.1.js │ │ └── underscore.js │ ├── about.html │ ├── databases.html │ ├── examples.html │ ├── genindex.html │ ├── index.html │ ├── installation.html │ ├── methods.html │ ├── network.html │ ├── objects.inv │ ├── py-modindex.html │ ├── search.html │ ├── searchindex.js │ └── utils.html ├── index.rst ├── installation.rst ├── make.bat ├── methods.rst ├── network.rst ├── references.bib ├── requirements.txt └── utils.rst ├── examples ├── Getting_Started │ ├── DatabaseGrowth.pdf │ ├── Getting Started with APS.ipynb │ ├── Getting Started with DBLP.ipynb │ ├── Getting Started with MAG.ipynb │ ├── Getting Started with OpenAlex.ipynb │ ├── Getting Started with PubMed.ipynb │ ├── Getting Started with WOS.ipynb │ ├── Getting Started with a Custom DB.ipynb │ ├── Getting Started with a Dask Example.ipynb │ ├── The Growth of Science.ipynb │ └── Working from a publication list.ipynb ├── GlobalCitationNetwork │ ├── GlobalCitationNetwork_analysis.ipynb │ ├── GlobalCitationNetwork_dataprep.ipynb │ ├── data │ │ ├── Chengetal_idealist.csv.gz │ │ ├── diffusion_panel_data_1990_2017.csv.gz │ │ ├── link_prediction_panel_data_1990_2017.csv.gz │ │ ├── oa_country_productivity.csv │ │ └── oa_countrycites_nosameorg_auc.csv.gz │ └── vizutils.py ├── Method_Examples │ ├── Comparing pandas, spark and dask-- number of citations.ipynb │ ├── Example Career Analysis.ipynb │ ├── Example Career Topic Switching.ipynb │ ├── Example Novelty.ipynb │ ├── Example Publication Citations.ipynb │ ├── Example Reference Strength.ipynb │ ├── Example of Credit Allocation.ipynb │ └── Example of Interdisciplinarity.ipynb ├── NLP_Examples │ ├── CoWordMention.html │ ├── Example of Coword Mention Network.ipynb │ └── Example_Node2vec (umap,sem_axis).ipynb ├── Network_Examples │ ├── DeSollaPriceCarrerCitations.pdf │ ├── DiversityCocitiation.pdf │ ├── Example of Cocitation Network.ipynb │ ├── Example of Diffusion of Scientific Credit.ipynb │ ├── NetworkNormalizedCitationAPS.ipynb │ ├── StirlingCocitiation.pdf │ └── Three Databases and Career Topic Switching.ipynb ├── ScienceOfScienceTextbook │ ├── Chapter 0 Preparing PySciSci.ipynb │ ├── Chapter 01 Productivity of a Scientist.ipynb │ ├── Chapter 02 The h-index.ipynb │ ├── Chapter 05 Random Impact Rule.ipynb │ ├── Chapter 06 The Q-Factor.ipynb │ ├── Chapter 08 The Increasing Dominance of Teams in Science.ipynb │ ├── Chapter 10 Coauthorship Networks.ipynb │ └── Chapter 14 Credit Allocation.ipynb ├── example_data │ ├── DeSollaPriceCareer.csv │ ├── fenn_paa.csv │ ├── fenn_pub2ref.csv │ └── focus_publications_example.csv └── example_interactive_html │ ├── sem_axis.html │ └── umap_fig.html ├── pyscisci ├── __init__.py ├── all.py ├── database.py ├── datasource │ ├── APS.py │ ├── CustomDB.py │ ├── DBLP.py │ ├── MAG.py │ ├── OpenAlex.py │ ├── PubMed.py │ ├── WOS.py │ ├── __init__.py │ └── readwrite.py ├── embedding.py ├── filter.py ├── methods │ ├── __init__.py │ ├── author.py │ ├── careertopics.py │ ├── cindex.py │ ├── creditshare.py │ ├── diffusionscientificcredit.py │ ├── disruption.py │ ├── diversity.py │ ├── hindex.py │ ├── hotstreak.py │ ├── journal.py │ ├── longtermimpact.py │ ├── netnormcite.py │ ├── novelty.py │ ├── pivotscore.py │ ├── productivitytrajectory.py │ ├── publication.py │ ├── qfactor.py │ ├── raostirling.py │ ├── referencestrength.py │ ├── sleepingbeauty.py │ └── topicsimilarity.py ├── network.py ├── nlp.py ├── sparsenetworkutils.py ├── tests │ ├── __init__.py │ └── test_utils.py ├── utils.py └── visualization.py └── setup.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/.gitignore -------------------------------------------------------------------------------- /.readthedocs.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/.readthedocs.yml -------------------------------------------------------------------------------- /.travis.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/.travis.yml -------------------------------------------------------------------------------- /CODE_OF_CONDUCT.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/CODE_OF_CONDUCT.md -------------------------------------------------------------------------------- /CONTRIBUTING.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/CONTRIBUTING.md -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/LICENSE -------------------------------------------------------------------------------- /Pipfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/Pipfile -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/README.md -------------------------------------------------------------------------------- /docs/Makefile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/Makefile -------------------------------------------------------------------------------- /docs/about.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/about.rst -------------------------------------------------------------------------------- /docs/conf.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/conf.py -------------------------------------------------------------------------------- /docs/databases.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/databases.rst -------------------------------------------------------------------------------- /docs/examples.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/examples.rst -------------------------------------------------------------------------------- /docs/html/.buildinfo: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/.buildinfo -------------------------------------------------------------------------------- /docs/html/.doctrees/about.doctree: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/.doctrees/about.doctree -------------------------------------------------------------------------------- /docs/html/.doctrees/databases.doctree: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/.doctrees/databases.doctree -------------------------------------------------------------------------------- /docs/html/.doctrees/environment.pickle: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/.doctrees/environment.pickle -------------------------------------------------------------------------------- /docs/html/.doctrees/examples.doctree: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/.doctrees/examples.doctree -------------------------------------------------------------------------------- /docs/html/.doctrees/index.doctree: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/.doctrees/index.doctree -------------------------------------------------------------------------------- /docs/html/.doctrees/installation.doctree: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/.doctrees/installation.doctree -------------------------------------------------------------------------------- /docs/html/.doctrees/methods.doctree: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/.doctrees/methods.doctree -------------------------------------------------------------------------------- /docs/html/.doctrees/network.doctree: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/.doctrees/network.doctree -------------------------------------------------------------------------------- /docs/html/.doctrees/utils.doctree: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/.doctrees/utils.doctree -------------------------------------------------------------------------------- /docs/html/_sources/about.rst.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_sources/about.rst.txt -------------------------------------------------------------------------------- /docs/html/_sources/databases.rst.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_sources/databases.rst.txt -------------------------------------------------------------------------------- /docs/html/_sources/examples.rst.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_sources/examples.rst.txt -------------------------------------------------------------------------------- /docs/html/_sources/index.rst.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_sources/index.rst.txt -------------------------------------------------------------------------------- /docs/html/_sources/installation.rst.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_sources/installation.rst.txt -------------------------------------------------------------------------------- /docs/html/_sources/methods.rst.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_sources/methods.rst.txt -------------------------------------------------------------------------------- /docs/html/_sources/network.rst.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_sources/network.rst.txt -------------------------------------------------------------------------------- /docs/html/_sources/utils.rst.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_sources/utils.rst.txt -------------------------------------------------------------------------------- /docs/html/_static/_sphinx_javascript_frameworks_compat.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/_sphinx_javascript_frameworks_compat.js -------------------------------------------------------------------------------- /docs/html/_static/alabaster.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/alabaster.css -------------------------------------------------------------------------------- /docs/html/_static/basic.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/basic.css -------------------------------------------------------------------------------- /docs/html/_static/custom.css: -------------------------------------------------------------------------------- 1 | /* This file intentionally left blank. */ 2 | -------------------------------------------------------------------------------- /docs/html/_static/doctools.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/doctools.js -------------------------------------------------------------------------------- /docs/html/_static/documentation_options.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/documentation_options.js -------------------------------------------------------------------------------- /docs/html/_static/file.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/file.png -------------------------------------------------------------------------------- /docs/html/_static/jquery-3.6.0.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/jquery-3.6.0.js -------------------------------------------------------------------------------- /docs/html/_static/jquery.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/jquery.js -------------------------------------------------------------------------------- /docs/html/_static/language_data.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/language_data.js -------------------------------------------------------------------------------- /docs/html/_static/minus.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/minus.png -------------------------------------------------------------------------------- /docs/html/_static/plus.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/plus.png -------------------------------------------------------------------------------- /docs/html/_static/pygments.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/pygments.css -------------------------------------------------------------------------------- /docs/html/_static/searchtools.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/searchtools.js -------------------------------------------------------------------------------- /docs/html/_static/sphinx_highlight.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/sphinx_highlight.js -------------------------------------------------------------------------------- /docs/html/_static/underscore-1.13.1.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/underscore-1.13.1.js -------------------------------------------------------------------------------- /docs/html/_static/underscore.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/_static/underscore.js -------------------------------------------------------------------------------- /docs/html/about.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/about.html -------------------------------------------------------------------------------- /docs/html/databases.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/databases.html -------------------------------------------------------------------------------- /docs/html/examples.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/examples.html -------------------------------------------------------------------------------- /docs/html/genindex.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/genindex.html -------------------------------------------------------------------------------- /docs/html/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/index.html -------------------------------------------------------------------------------- /docs/html/installation.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/installation.html -------------------------------------------------------------------------------- /docs/html/methods.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/methods.html -------------------------------------------------------------------------------- /docs/html/network.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/network.html -------------------------------------------------------------------------------- /docs/html/objects.inv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/objects.inv -------------------------------------------------------------------------------- /docs/html/py-modindex.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/py-modindex.html -------------------------------------------------------------------------------- /docs/html/search.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/search.html -------------------------------------------------------------------------------- /docs/html/searchindex.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/searchindex.js -------------------------------------------------------------------------------- /docs/html/utils.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/html/utils.html -------------------------------------------------------------------------------- /docs/index.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/index.rst -------------------------------------------------------------------------------- /docs/installation.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/installation.rst -------------------------------------------------------------------------------- /docs/make.bat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/make.bat -------------------------------------------------------------------------------- /docs/methods.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/methods.rst -------------------------------------------------------------------------------- /docs/network.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/network.rst -------------------------------------------------------------------------------- /docs/references.bib: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/references.bib -------------------------------------------------------------------------------- /docs/requirements.txt: -------------------------------------------------------------------------------- 1 | sphinxcontrib-bibtex -------------------------------------------------------------------------------- /docs/utils.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/docs/utils.rst -------------------------------------------------------------------------------- /examples/Getting_Started/DatabaseGrowth.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Getting_Started/DatabaseGrowth.pdf -------------------------------------------------------------------------------- /examples/Getting_Started/Getting Started with APS.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Getting_Started/Getting Started with APS.ipynb -------------------------------------------------------------------------------- /examples/Getting_Started/Getting Started with DBLP.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Getting_Started/Getting Started with DBLP.ipynb -------------------------------------------------------------------------------- /examples/Getting_Started/Getting Started with MAG.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Getting_Started/Getting Started with MAG.ipynb -------------------------------------------------------------------------------- /examples/Getting_Started/Getting Started with OpenAlex.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Getting_Started/Getting Started with OpenAlex.ipynb -------------------------------------------------------------------------------- /examples/Getting_Started/Getting Started with PubMed.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Getting_Started/Getting Started with PubMed.ipynb -------------------------------------------------------------------------------- /examples/Getting_Started/Getting Started with WOS.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Getting_Started/Getting Started with WOS.ipynb -------------------------------------------------------------------------------- /examples/Getting_Started/Getting Started with a Custom DB.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Getting_Started/Getting Started with a Custom DB.ipynb -------------------------------------------------------------------------------- /examples/Getting_Started/Getting Started with a Dask Example.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Getting_Started/Getting Started with a Dask Example.ipynb -------------------------------------------------------------------------------- /examples/Getting_Started/The Growth of Science.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Getting_Started/The Growth of Science.ipynb -------------------------------------------------------------------------------- /examples/Getting_Started/Working from a publication list.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Getting_Started/Working from a publication list.ipynb -------------------------------------------------------------------------------- /examples/GlobalCitationNetwork/GlobalCitationNetwork_analysis.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/GlobalCitationNetwork/GlobalCitationNetwork_analysis.ipynb -------------------------------------------------------------------------------- /examples/GlobalCitationNetwork/GlobalCitationNetwork_dataprep.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/GlobalCitationNetwork/GlobalCitationNetwork_dataprep.ipynb -------------------------------------------------------------------------------- /examples/GlobalCitationNetwork/data/Chengetal_idealist.csv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/GlobalCitationNetwork/data/Chengetal_idealist.csv.gz -------------------------------------------------------------------------------- /examples/GlobalCitationNetwork/data/diffusion_panel_data_1990_2017.csv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/GlobalCitationNetwork/data/diffusion_panel_data_1990_2017.csv.gz -------------------------------------------------------------------------------- /examples/GlobalCitationNetwork/data/link_prediction_panel_data_1990_2017.csv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/GlobalCitationNetwork/data/link_prediction_panel_data_1990_2017.csv.gz -------------------------------------------------------------------------------- /examples/GlobalCitationNetwork/data/oa_country_productivity.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/GlobalCitationNetwork/data/oa_country_productivity.csv -------------------------------------------------------------------------------- /examples/GlobalCitationNetwork/data/oa_countrycites_nosameorg_auc.csv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/GlobalCitationNetwork/data/oa_countrycites_nosameorg_auc.csv.gz -------------------------------------------------------------------------------- /examples/GlobalCitationNetwork/vizutils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/GlobalCitationNetwork/vizutils.py -------------------------------------------------------------------------------- /examples/Method_Examples/Comparing pandas, spark and dask-- number of citations.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Method_Examples/Comparing pandas, spark and dask-- number of citations.ipynb -------------------------------------------------------------------------------- /examples/Method_Examples/Example Career Analysis.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Method_Examples/Example Career Analysis.ipynb -------------------------------------------------------------------------------- /examples/Method_Examples/Example Career Topic Switching.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Method_Examples/Example Career Topic Switching.ipynb -------------------------------------------------------------------------------- /examples/Method_Examples/Example Novelty.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Method_Examples/Example Novelty.ipynb -------------------------------------------------------------------------------- /examples/Method_Examples/Example Publication Citations.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Method_Examples/Example Publication Citations.ipynb -------------------------------------------------------------------------------- /examples/Method_Examples/Example Reference Strength.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Method_Examples/Example Reference Strength.ipynb -------------------------------------------------------------------------------- /examples/Method_Examples/Example of Credit Allocation.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Method_Examples/Example of Credit Allocation.ipynb -------------------------------------------------------------------------------- /examples/Method_Examples/Example of Interdisciplinarity.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Method_Examples/Example of Interdisciplinarity.ipynb -------------------------------------------------------------------------------- /examples/NLP_Examples/CoWordMention.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/NLP_Examples/CoWordMention.html -------------------------------------------------------------------------------- /examples/NLP_Examples/Example of Coword Mention Network.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/NLP_Examples/Example of Coword Mention Network.ipynb -------------------------------------------------------------------------------- /examples/NLP_Examples/Example_Node2vec (umap,sem_axis).ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/NLP_Examples/Example_Node2vec (umap,sem_axis).ipynb -------------------------------------------------------------------------------- /examples/Network_Examples/DeSollaPriceCarrerCitations.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Network_Examples/DeSollaPriceCarrerCitations.pdf -------------------------------------------------------------------------------- /examples/Network_Examples/DiversityCocitiation.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Network_Examples/DiversityCocitiation.pdf -------------------------------------------------------------------------------- /examples/Network_Examples/Example of Cocitation Network.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Network_Examples/Example of Cocitation Network.ipynb -------------------------------------------------------------------------------- /examples/Network_Examples/Example of Diffusion of Scientific Credit.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Network_Examples/Example of Diffusion of Scientific Credit.ipynb -------------------------------------------------------------------------------- /examples/Network_Examples/NetworkNormalizedCitationAPS.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Network_Examples/NetworkNormalizedCitationAPS.ipynb -------------------------------------------------------------------------------- /examples/Network_Examples/StirlingCocitiation.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Network_Examples/StirlingCocitiation.pdf -------------------------------------------------------------------------------- /examples/Network_Examples/Three Databases and Career Topic Switching.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/Network_Examples/Three Databases and Career Topic Switching.ipynb -------------------------------------------------------------------------------- /examples/ScienceOfScienceTextbook/Chapter 0 Preparing PySciSci.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/ScienceOfScienceTextbook/Chapter 0 Preparing PySciSci.ipynb -------------------------------------------------------------------------------- /examples/ScienceOfScienceTextbook/Chapter 01 Productivity of a Scientist.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/ScienceOfScienceTextbook/Chapter 01 Productivity of a Scientist.ipynb -------------------------------------------------------------------------------- /examples/ScienceOfScienceTextbook/Chapter 02 The h-index.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/ScienceOfScienceTextbook/Chapter 02 The h-index.ipynb -------------------------------------------------------------------------------- /examples/ScienceOfScienceTextbook/Chapter 05 Random Impact Rule.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/ScienceOfScienceTextbook/Chapter 05 Random Impact Rule.ipynb -------------------------------------------------------------------------------- /examples/ScienceOfScienceTextbook/Chapter 06 The Q-Factor.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/ScienceOfScienceTextbook/Chapter 06 The Q-Factor.ipynb -------------------------------------------------------------------------------- /examples/ScienceOfScienceTextbook/Chapter 08 The Increasing Dominance of Teams in Science.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/ScienceOfScienceTextbook/Chapter 08 The Increasing Dominance of Teams in Science.ipynb -------------------------------------------------------------------------------- /examples/ScienceOfScienceTextbook/Chapter 10 Coauthorship Networks.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/ScienceOfScienceTextbook/Chapter 10 Coauthorship Networks.ipynb -------------------------------------------------------------------------------- /examples/ScienceOfScienceTextbook/Chapter 14 Credit Allocation.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/ScienceOfScienceTextbook/Chapter 14 Credit Allocation.ipynb -------------------------------------------------------------------------------- /examples/example_data/DeSollaPriceCareer.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/example_data/DeSollaPriceCareer.csv -------------------------------------------------------------------------------- /examples/example_data/fenn_paa.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/example_data/fenn_paa.csv -------------------------------------------------------------------------------- /examples/example_data/fenn_pub2ref.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/example_data/fenn_pub2ref.csv -------------------------------------------------------------------------------- /examples/example_data/focus_publications_example.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/example_data/focus_publications_example.csv -------------------------------------------------------------------------------- /examples/example_interactive_html/sem_axis.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/example_interactive_html/sem_axis.html -------------------------------------------------------------------------------- /examples/example_interactive_html/umap_fig.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/examples/example_interactive_html/umap_fig.html -------------------------------------------------------------------------------- /pyscisci/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/__init__.py -------------------------------------------------------------------------------- /pyscisci/all.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/all.py -------------------------------------------------------------------------------- /pyscisci/database.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/database.py -------------------------------------------------------------------------------- /pyscisci/datasource/APS.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/datasource/APS.py -------------------------------------------------------------------------------- /pyscisci/datasource/CustomDB.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/datasource/CustomDB.py -------------------------------------------------------------------------------- /pyscisci/datasource/DBLP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/datasource/DBLP.py -------------------------------------------------------------------------------- /pyscisci/datasource/MAG.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/datasource/MAG.py -------------------------------------------------------------------------------- /pyscisci/datasource/OpenAlex.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/datasource/OpenAlex.py -------------------------------------------------------------------------------- /pyscisci/datasource/PubMed.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/datasource/PubMed.py -------------------------------------------------------------------------------- /pyscisci/datasource/WOS.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/datasource/WOS.py -------------------------------------------------------------------------------- /pyscisci/datasource/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /pyscisci/datasource/readwrite.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/datasource/readwrite.py -------------------------------------------------------------------------------- /pyscisci/embedding.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/embedding.py -------------------------------------------------------------------------------- /pyscisci/filter.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/filter.py -------------------------------------------------------------------------------- /pyscisci/methods/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /pyscisci/methods/author.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/author.py -------------------------------------------------------------------------------- /pyscisci/methods/careertopics.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/careertopics.py -------------------------------------------------------------------------------- /pyscisci/methods/cindex.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/cindex.py -------------------------------------------------------------------------------- /pyscisci/methods/creditshare.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/creditshare.py -------------------------------------------------------------------------------- /pyscisci/methods/diffusionscientificcredit.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/diffusionscientificcredit.py -------------------------------------------------------------------------------- /pyscisci/methods/disruption.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/disruption.py -------------------------------------------------------------------------------- /pyscisci/methods/diversity.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/diversity.py -------------------------------------------------------------------------------- /pyscisci/methods/hindex.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/hindex.py -------------------------------------------------------------------------------- /pyscisci/methods/hotstreak.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/hotstreak.py -------------------------------------------------------------------------------- /pyscisci/methods/journal.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/journal.py -------------------------------------------------------------------------------- /pyscisci/methods/longtermimpact.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/longtermimpact.py -------------------------------------------------------------------------------- /pyscisci/methods/netnormcite.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/netnormcite.py -------------------------------------------------------------------------------- /pyscisci/methods/novelty.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/novelty.py -------------------------------------------------------------------------------- /pyscisci/methods/pivotscore.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/pivotscore.py -------------------------------------------------------------------------------- /pyscisci/methods/productivitytrajectory.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/productivitytrajectory.py -------------------------------------------------------------------------------- /pyscisci/methods/publication.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/publication.py -------------------------------------------------------------------------------- /pyscisci/methods/qfactor.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/qfactor.py -------------------------------------------------------------------------------- /pyscisci/methods/raostirling.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/raostirling.py -------------------------------------------------------------------------------- /pyscisci/methods/referencestrength.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/referencestrength.py -------------------------------------------------------------------------------- /pyscisci/methods/sleepingbeauty.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/sleepingbeauty.py -------------------------------------------------------------------------------- /pyscisci/methods/topicsimilarity.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/methods/topicsimilarity.py -------------------------------------------------------------------------------- /pyscisci/network.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/network.py -------------------------------------------------------------------------------- /pyscisci/nlp.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/nlp.py -------------------------------------------------------------------------------- /pyscisci/sparsenetworkutils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/sparsenetworkutils.py -------------------------------------------------------------------------------- /pyscisci/tests/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /pyscisci/tests/test_utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/tests/test_utils.py -------------------------------------------------------------------------------- /pyscisci/utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/utils.py -------------------------------------------------------------------------------- /pyscisci/visualization.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/pyscisci/visualization.py -------------------------------------------------------------------------------- /setup.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SciSciCollective/pyscisci/HEAD/setup.py --------------------------------------------------------------------------------