├── .Rbuildignore ├── .Rhistory ├── .gitignore ├── .travis.yml ├── DESCRIPTION ├── LICENSE ├── NAMESPACE ├── NEWS.md ├── R ├── default_ics.R ├── default_names.R ├── default_params.R ├── globals.R ├── model_info.R ├── models.R ├── plotting.R ├── run_shiny.R ├── seasonalseir.R ├── seirs.R └── solving.R ├── README.Rmd ├── README.md ├── cran-comments.md ├── inst └── CITATION ├── man ├── SIR.Rd ├── SIRS.Rd ├── SIRSbirths.Rd ├── SIRSvaccination.Rd ├── SIRbirths.Rd ├── SIRvaccination.Rd ├── SIS.Rd ├── SISbirths.Rd ├── default_models.Rd ├── get_ics.Rd ├── get_name.Rd ├── get_params.Rd ├── plot_model.Rd ├── run_shiny.Rd ├── seir.app.Rd ├── seirs.app.Rd └── solve_eqns.Rd ├── shinySIRSscreenshot.png ├── shinySIRscreenshot.png └── vignettes ├── Vignette.Rmd ├── shinySIRSscreenshot.png └── shinySIRscreenshot.png /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/SineadMorris/shinySIR/HEAD/.Rbuildignore 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