├── Cardiac_CLIP ├── cardiac_clip │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-311.pyc │ │ └── config.cpython-311.pyc │ ├── datamodules │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-311.pyc │ │ │ ├── base_datamodule.cpython-311.pyc │ │ │ ├── cls_nlst_datamodule.cpython-311.pyc │ │ │ ├── multitask_datamodule.cpython-311.pyc │ │ │ └── pretraining_jinling_datamodule.cpython-311.pyc │ │ ├── base_datamodule.py │ │ ├── cls_nlst_datamodule.py │ │ ├── multitask_datamodule.py │ │ └── pretraining_jinling_datamodule.py │ ├── datasets │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-311.pyc │ │ │ ├── base_NLSTdataset.cpython-311.pyc │ │ │ ├── base_dataset.cpython-311.pyc │ │ │ ├── cls_nlst_dataset.cpython-311.pyc │ │ │ └── pretraining_jinling_dataset.cpython-311.pyc │ │ ├── base_NLSTdataset.py │ │ ├── base_dataset.py │ │ ├── cls_nlst_dataset.py │ │ └── pretraining_jinling_dataset.py │ ├── gadgets │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-311.pyc │ │ │ └── my_metrics.cpython-311.pyc │ │ └── my_metrics.py │ ├── modules │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-311.pyc │ │ │ ├── cardiac_clip_module.cpython-311.pyc │ │ │ ├── cardiac_clip_utils.cpython-311.pyc │ │ │ ├── dist_utils.cpython-311.pyc │ │ │ ├── objectives.cpython-311.pyc │ │ │ ├── position_embeddings.cpython-311.pyc │ │ │ └── prediction_heads.cpython-311.pyc │ │ ├── cardiac_clip_module.py │ │ ├── cardiac_clip_utils.py │ │ ├── dist_utils.py │ │ ├── language_encoders │ │ │ ├── __init__.py │ │ │ ├── __pycache__ │ │ │ │ ├── __init__.cpython-311.pyc │ │ │ │ └── bert_model.cpython-311.pyc │ │ │ └── bert_model.py │ │ ├── objectives.py │ │ ├── position_embeddings.py │ │ ├── prediction_heads.py │ │ └── vision_encoders │ │ │ ├── __init__.py │ │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-311.pyc │ │ │ └── clip_model.cpython-311.pyc │ │ │ └── clip_model.py │ └── utils │ │ ├── __init__.py │ │ └── data_collator.py ├── inference.py └── train.py ├── README.md ├── cardiac_clip_requirements.txt ├── sample_CT.nii.gz └── sample_CTA.nii.gz /Cardiac_CLIP/cardiac_clip/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/__pycache__/__init__.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/__pycache__/__init__.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/__pycache__/config.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/__pycache__/config.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datamodules/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datamodules/__init__.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datamodules/__pycache__/__init__.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datamodules/__pycache__/__init__.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datamodules/__pycache__/base_datamodule.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datamodules/__pycache__/base_datamodule.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datamodules/__pycache__/cls_nlst_datamodule.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datamodules/__pycache__/cls_nlst_datamodule.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datamodules/__pycache__/multitask_datamodule.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datamodules/__pycache__/multitask_datamodule.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datamodules/__pycache__/pretraining_jinling_datamodule.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datamodules/__pycache__/pretraining_jinling_datamodule.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datamodules/base_datamodule.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datamodules/base_datamodule.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datamodules/cls_nlst_datamodule.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datamodules/cls_nlst_datamodule.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datamodules/multitask_datamodule.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datamodules/multitask_datamodule.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datamodules/pretraining_jinling_datamodule.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datamodules/pretraining_jinling_datamodule.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datasets/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datasets/__init__.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datasets/__pycache__/__init__.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datasets/__pycache__/__init__.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datasets/__pycache__/base_NLSTdataset.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datasets/__pycache__/base_NLSTdataset.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datasets/__pycache__/base_dataset.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datasets/__pycache__/base_dataset.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datasets/__pycache__/cls_nlst_dataset.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datasets/__pycache__/cls_nlst_dataset.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datasets/__pycache__/pretraining_jinling_dataset.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datasets/__pycache__/pretraining_jinling_dataset.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datasets/base_NLSTdataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datasets/base_NLSTdataset.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datasets/base_dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datasets/base_dataset.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datasets/cls_nlst_dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datasets/cls_nlst_dataset.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/datasets/pretraining_jinling_dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/datasets/pretraining_jinling_dataset.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/gadgets/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/gadgets/__pycache__/__init__.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/gadgets/__pycache__/__init__.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/gadgets/__pycache__/my_metrics.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/gadgets/__pycache__/my_metrics.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/gadgets/my_metrics.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/gadgets/my_metrics.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/__init__.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/__pycache__/__init__.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/__pycache__/__init__.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/__pycache__/cardiac_clip_module.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/__pycache__/cardiac_clip_module.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/__pycache__/cardiac_clip_utils.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/__pycache__/cardiac_clip_utils.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/__pycache__/dist_utils.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/__pycache__/dist_utils.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/__pycache__/objectives.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/__pycache__/objectives.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/__pycache__/position_embeddings.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/__pycache__/position_embeddings.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/__pycache__/prediction_heads.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/__pycache__/prediction_heads.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/cardiac_clip_module.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/cardiac_clip_module.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/cardiac_clip_utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/cardiac_clip_utils.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/dist_utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/dist_utils.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/language_encoders/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/language_encoders/__pycache__/__init__.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/language_encoders/__pycache__/__init__.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/language_encoders/__pycache__/bert_model.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/language_encoders/__pycache__/bert_model.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/language_encoders/bert_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/language_encoders/bert_model.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/objectives.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/objectives.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/position_embeddings.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/position_embeddings.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/prediction_heads.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/prediction_heads.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/vision_encoders/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/vision_encoders/__pycache__/__init__.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/vision_encoders/__pycache__/__init__.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/vision_encoders/__pycache__/clip_model.cpython-311.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/vision_encoders/__pycache__/clip_model.cpython-311.pyc -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/modules/vision_encoders/clip_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/modules/vision_encoders/clip_model.py -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/utils/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /Cardiac_CLIP/cardiac_clip/utils/data_collator.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/cardiac_clip/utils/data_collator.py -------------------------------------------------------------------------------- /Cardiac_CLIP/inference.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/inference.py -------------------------------------------------------------------------------- /Cardiac_CLIP/train.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/Cardiac_CLIP/train.py -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/README.md -------------------------------------------------------------------------------- /cardiac_clip_requirements.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/cardiac_clip_requirements.txt -------------------------------------------------------------------------------- /sample_CT.nii.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/sample_CT.nii.gz -------------------------------------------------------------------------------- /sample_CTA.nii.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Sliver-g/Cardiac-CLIP/HEAD/sample_CTA.nii.gz --------------------------------------------------------------------------------