├── PseKRAAC ├── __init__.py ├── type1.py ├── type10.py ├── type11.py ├── type12.py ├── type13.py ├── type14.py ├── type15.py ├── type16.py ├── type2.py ├── type3A.py ├── type3B.py ├── type4.py ├── type5.py ├── type6A.py ├── type6B.py ├── type6C.py ├── type7.py ├── type8.py └── type9.py ├── README.md ├── cluster.py ├── clusters ├── __init__.py ├── apc.py ├── dbscan.py ├── hcluster.py ├── kmeans.py ├── meanshift.py ├── pca.py ├── readCode.py ├── saveCluster.py └── tsne.py ├── codes ├── AAC.py ├── AAINDEX.py ├── APAAC.py ├── ASA.py ├── BINARY.py ├── BLOSUM62.py ├── CKSAAGP.py ├── CKSAAP.py ├── CTDC.py ├── CTDCClass.py ├── CTDD.py ├── CTDDClass.py ├── CTDT.py ├── CTDTClass.py ├── CTriad.py ├── DDE.py ├── DPC.py ├── Disorder.py ├── DisorderB.py ├── DisorderC.py ├── EAAC.py ├── EGAAC.py ├── GAAC.py ├── GDPC.py ├── GTPC.py ├── Geary.py ├── KNNpeptide.py ├── KNNprotein.py ├── KNNprotein.v1.py ├── KSCTriad.py ├── Moran.py ├── NMBroto.py ├── NeedlemanWunsch.py ├── PAAC.py ├── PSSM.py ├── QSOrder.py ├── SOCNumber.py ├── SSEB.py ├── SSEC.py ├── TA.py ├── TPC.py ├── ZSCALE.py ├── __init__.py ├── checkFasta.py ├── readFasta.py └── saveCode.py ├── data ├── AAidx.csv ├── AAidx.txt ├── AAindex.txt ├── CTD.txt ├── Grantham.txt ├── PAAC.txt ├── Schneider-Wrede.txt └── blosum62.txt ├── examples ├── example.tsv ├── label.txt ├── predictedProteinProperty │ ├── P31946.dis │ ├── P31946.pssm │ ├── P31946.spXout │ ├── P31946.ss2 │ ├── P31947.dis │ ├── P31947.pssm │ ├── P31947.spXout │ ├── P31947.ss2 │ ├── P61981.dis │ ├── P61981.pssm │ ├── P61981.spXout │ ├── P61981.ss2 │ ├── P62258.dis │ ├── P62258.pssm │ ├── P62258.spXout │ ├── P62258.ss2 │ ├── Q04917.dis │ ├── Q04917.pssm │ ├── Q04917.spXout │ └── Q04917.ss2 ├── test-peptide.txt ├── test-protein.txt ├── train-peptide.txt └── train-protein.txt ├── feaSelector.py ├── featureSelection ├── CHI2.py ├── IG.py ├── MIC.py ├── __init__.py ├── pearsonr.py └── saveFeature.py ├── iFeature.py ├── iFeatureManual.pdf ├── iFeaturePseKRAAC.py └── 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