├── .github └── workflows │ └── tests.yml ├── .gitignore ├── LICENSE.txt ├── README.md ├── docs ├── .nojekyll ├── Makefile ├── assets │ └── snp2cell_schematic.png ├── files │ ├── adata_lung_subsampled.h5ad │ ├── lung_egrn_subset.pkl │ └── nx_egrn_bone_dev_immune.pkl ├── index.html ├── make.bat └── source │ ├── about.md │ ├── api.rst │ ├── conf.py │ ├── example.py │ ├── fgwas │ └── results │ │ └── LDSC_results │ │ └── GCST90244098 │ │ └── input.gz │ ├── index.rst │ ├── installation.md │ ├── snp2cell_fgwas_scores.ipynb │ └── toy_example.ipynb ├── requirements.txt ├── setup.py ├── snp2cell ├── __init__.py ├── cli.py ├── recipes.py ├── snp2cell_class.py └── util.py └── tests ├── conftest.py ├── test_snp2cell.py ├── test_toy_example.py └── test_util.py /.github/workflows/tests.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Teichlab/snp2cell/HEAD/.github/workflows/tests.yml 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