├── .Rbuildignore ├── .github ├── .gitignore ├── CODE_OF_CONDUCT.md ├── CONTRIBUTING.md ├── ISSUE_TEMPLATE.md ├── ISSUE_TEMPLATE │ └── issue_template.md └── SUPPORT.md ├── .gitignore ├── DESCRIPTION ├── LICENSE.md ├── NAMESPACE ├── NEWS.md ├── R ├── AMMI_indexes.R ├── Annicchiarico.R ├── FAI_BLUP.R ├── Fox.R ├── Huehn.R ├── MTSI.R ├── Schmildt.R ├── Shukla.R ├── Smith_Hazel.R ├── Thennarasu.R ├── WAASB.R ├── acv.R ├── anova_ind.R ├── anova_joint.R ├── arrange_ggplot.R ├── as.lpcor.R ├── barplots.R ├── bind_cv.R ├── blup_indexes.R ├── can_cor.R ├── clustering.R ├── coincidence_index.R ├── colindiag.R ├── comb_vars.R ├── corr_ci.R ├── corr_coef.R ├── corr_plot.R ├── corr_ss.R ├── corr_stab_ind.R ├── correlated_vars.R ├── covcor_design.R ├── cv_ammi.R ├── cv_ammif.R ├── cv_blup.R ├── data_simula.R ├── desc_stat.R ├── ecovalence.R ├── env_dissimilarity.R ├── env_stratification.R ├── find_outliers.R ├── gafem.R ├── gai.R ├── gamem.R ├── gamem_met.R ├── ge_acv.R ├── ge_cluster.R ├── ge_details.R ├── ge_effects.R ├── ge_factanal.R ├── ge_means.R ├── ge_plot.R ├── ge_polar.R ├── ge_reg.R ├── ge_stats.R ├── ge_winners.R ├── get_corvars.R ├── get_covmat.R ├── get_dist.R ├── get_model_data.R ├── gge.R ├── gtb.R ├── gytb.R ├── imput_miss_val.R ├── inspect.R ├── is.lpcorr.R ├── lineplots.R ├── lpcorr.R ├── mahala.R ├── mahala_design.R ├── make_long.R ├── make_mat.R ├── mantel_test.R ├── metan-package.r ├── mgidi.R ├── mps.R ├── mtmps.R ├── non_collinear_vars.R ├── pairs_mantel.R ├── path_coeff.R ├── performs_ammi.R ├── plaisted_peterson.R ├── plot_blup.R ├── plot_ci.R ├── plot_eigen.R ├── plot_scores.R ├── plot_waasby.R ├── resca.R ├── residual_plots.R ├── resp_surf.R ├── select_helpers.R ├── select_pred.R ├── solve_svd.R ├── split_factors.R ├── superiority.R ├── themes.R ├── transpose_df.R ├── tukey_hsd.R ├── utilities.R ├── utils-pipe.R ├── utils-tidy-eval.R ├── utils_as.R ├── utils_bind.R ├── utils_data_org.R ├── utils_na.R ├── utils_progress.R ├── utils_sample.R ├── utils_sets.R ├── venn_plot.R ├── waas.R ├── waas_means.R ├── wsmp.R └── zzz.R ├── README.Rmd ├── README.md ├── cran-comments.md ├── data ├── data_alpha.rda ├── data_g.rda ├── data_ge.rda ├── data_ge2.rda ├── int.effects.rda └── meansGxE.rda ├── docs ├── 404.html ├── CODE_OF_CONDUCT.html ├── CONTRIBUTING.html ├── ISSUE_TEMPLATE.html ├── LICENSE.html ├── SUPPORT.html ├── apple-touch-icon-120x120.png ├── apple-touch-icon-152x152.png ├── apple-touch-icon-180x180.png ├── apple-touch-icon-60x60.png ├── apple-touch-icon-76x76.png ├── apple-touch-icon.png ├── articles │ ├── index.html │ ├── metan_start.html │ ├── metan_start_files │ │ ├── figure-html │ │ │ ├── unnamed-chunk-10-1.png │ │ │ ├── unnamed-chunk-12-1.png │ │ │ ├── unnamed-chunk-17-1.png │ │ │ ├── unnamed-chunk-3-1.png │ │ │ ├── unnamed-chunk-6-1.png │ │ │ └── unnamed-chunk-9-1.png │ │ └── header-attrs-2.11 │ │ │ └── header-attrs.js │ ├── validation.png │ ├── vignettes_ammi.html │ ├── vignettes_ammi_files │ │ ├── crosstalk-1.2.0 │ │ │ ├── css │ │ │ │ └── crosstalk.min.css │ │ │ ├── js │ │ │ │ ├── crosstalk.js │ │ │ │ ├── crosstalk.js.map │ │ │ │ ├── crosstalk.min.js │ │ │ │ └── crosstalk.min.js.map │ │ │ └── scss │ │ │ │ └── crosstalk.scss │ │ ├── datatables-binding-0.20 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.23 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.24 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.27 │ │ │ └── datatables.js │ │ ├── datatables-css-0.0.0 │ │ │ └── datatables-crosstalk.css │ │ ├── dt-core-1.11.3 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-core-1.12.1 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-ext-buttons-1.11.3 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── dt-ext-buttons-1.12.1 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── figure-html │ │ │ ├── unnamed-chunk-12-1.png │ │ │ ├── unnamed-chunk-13-1.png │ │ │ ├── unnamed-chunk-14-1.png │ │ │ ├── unnamed-chunk-15-1.png │ │ │ ├── unnamed-chunk-16-1.png │ │ │ ├── unnamed-chunk-2-1.png │ │ │ ├── unnamed-chunk-20-1.png │ │ │ ├── unnamed-chunk-21-1.png │ │ │ └── unnamed-chunk-25-1.png │ │ ├── header-attrs-2.11 │ │ │ └── header-attrs.js │ │ ├── htmlwidgets-1.5.4 │ │ │ └── htmlwidgets.js │ │ ├── htmlwidgets-1.6.1 │ │ │ └── htmlwidgets.js │ │ ├── jquery-3.6.0 │ │ │ ├── jquery-3.6.0.js │ │ │ ├── jquery-3.6.0.min.js │ │ │ └── jquery-3.6.0.min.map │ │ ├── jszip-1.11.3 │ │ │ └── jszip.min.js │ │ ├── jszip-1.12.1 │ │ │ └── jszip.min.js │ │ ├── pdfmake-1.11.3 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ │ └── pdfmake-1.12.1 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ ├── vignettes_biometry.html │ ├── vignettes_biometry_files │ │ ├── crosstalk-1.2.0 │ │ │ ├── css │ │ │ │ └── crosstalk.min.css │ │ │ ├── js │ │ │ │ ├── crosstalk.js │ │ │ │ ├── crosstalk.js.map │ │ │ │ ├── crosstalk.min.js │ │ │ │ └── crosstalk.min.js.map │ │ │ └── scss │ │ │ │ └── crosstalk.scss │ │ ├── datatables-binding-0.20 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.23 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.24 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.27 │ │ │ └── datatables.js │ │ ├── datatables-css-0.0.0 │ │ │ └── datatables-crosstalk.css │ │ ├── dt-core-1.11.3 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-core-1.12.1 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-ext-buttons-1.11.3 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── dt-ext-buttons-1.12.1 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── figure-html │ │ │ ├── unnamed-chunk-11-1.png │ │ │ ├── unnamed-chunk-17-1.png │ │ │ ├── unnamed-chunk-2-1.png │ │ │ ├── unnamed-chunk-31-1.png │ │ │ ├── unnamed-chunk-32-1.png │ │ │ ├── unnamed-chunk-35-1.png │ │ │ ├── unnamed-chunk-37-1.png │ │ │ ├── unnamed-chunk-42-1.png │ │ │ ├── unnamed-chunk-6-1.png │ │ │ ├── unnamed-chunk-7-1.png │ │ │ └── unnamed-chunk-8-1.png │ │ ├── header-attrs-2.11 │ │ │ └── header-attrs.js │ │ ├── htmlwidgets-1.5.4 │ │ │ └── htmlwidgets.js │ │ ├── htmlwidgets-1.6.1 │ │ │ └── htmlwidgets.js │ │ ├── jquery-3.6.0 │ │ │ ├── jquery-3.6.0.js │ │ │ ├── jquery-3.6.0.min.js │ │ │ └── jquery-3.6.0.min.map │ │ ├── jszip-1.11.3 │ │ │ └── jszip.min.js │ │ ├── jszip-1.12.1 │ │ │ └── jszip.min.js │ │ ├── pdfmake-1.11.3 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ │ └── pdfmake-1.12.1 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ ├── vignettes_blup.html │ ├── vignettes_blup_files │ │ ├── crosstalk-1.2.0 │ │ │ ├── css │ │ │ │ └── crosstalk.min.css │ │ │ ├── js │ │ │ │ ├── crosstalk.js │ │ │ │ ├── crosstalk.js.map │ │ │ │ ├── crosstalk.min.js │ │ │ │ └── crosstalk.min.js.map │ │ │ └── scss │ │ │ │ └── crosstalk.scss │ │ ├── datatables-binding-0.20 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.23 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.24 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.27 │ │ │ └── datatables.js │ │ ├── datatables-css-0.0.0 │ │ │ └── datatables-crosstalk.css │ │ ├── dt-core-1.11.3 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-core-1.12.1 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-ext-buttons-1.11.3 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── dt-ext-buttons-1.12.1 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── figure-html │ │ │ ├── unnamed-chunk-10-1.png │ │ │ ├── unnamed-chunk-11-1.png │ │ │ ├── unnamed-chunk-16-1.png │ │ │ ├── unnamed-chunk-2-1.png │ │ │ ├── unnamed-chunk-21-1.png │ │ │ ├── unnamed-chunk-23-1.png │ │ │ ├── unnamed-chunk-24-1.png │ │ │ ├── unnamed-chunk-25-1.png │ │ │ ├── unnamed-chunk-27-1.png │ │ │ ├── unnamed-chunk-28-1.png │ │ │ ├── unnamed-chunk-32-1.png │ │ │ ├── unnamed-chunk-33-1.png │ │ │ └── unnamed-chunk-35-1.png │ │ ├── header-attrs-2.11 │ │ │ └── header-attrs.js │ │ ├── htmlwidgets-1.5.4 │ │ │ └── htmlwidgets.js │ │ ├── htmlwidgets-1.6.1 │ │ │ └── htmlwidgets.js │ │ ├── jquery-3.6.0 │ │ │ ├── jquery-3.6.0.js │ │ │ ├── jquery-3.6.0.min.js │ │ │ └── jquery-3.6.0.min.map │ │ ├── jszip-1.11.3 │ │ │ └── jszip.min.js │ │ ├── jszip-1.12.1 │ │ │ └── jszip.min.js │ │ ├── pdfmake-1.11.3 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ │ └── pdfmake-1.12.1 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ ├── vignettes_cross-validation.html │ ├── vignettes_cross-validation_files │ │ ├── crosstalk-1.2.0 │ │ │ ├── css │ │ │ │ └── crosstalk.min.css │ │ │ ├── js │ │ │ │ ├── crosstalk.js │ │ │ │ ├── crosstalk.js.map │ │ │ │ ├── crosstalk.min.js │ │ │ │ └── crosstalk.min.js.map │ │ │ └── scss │ │ │ │ └── crosstalk.scss │ │ ├── datatables-binding-0.20 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.23 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.24 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.27 │ │ │ └── datatables.js │ │ ├── datatables-css-0.0.0 │ │ │ └── datatables-crosstalk.css │ │ ├── dt-core-1.11.3 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-core-1.12.1 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-ext-buttons-1.11.3 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── dt-ext-buttons-1.12.1 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── figure-html │ │ │ └── unnamed-chunk-9-1.png │ │ ├── header-attrs-2.11 │ │ │ └── header-attrs.js │ │ ├── htmlwidgets-1.5.4 │ │ │ └── htmlwidgets.js │ │ ├── htmlwidgets-1.6.1 │ │ │ └── htmlwidgets.js │ │ ├── jquery-3.6.0 │ │ │ ├── jquery-3.6.0.js │ │ │ ├── jquery-3.6.0.min.js │ │ │ └── jquery-3.6.0.min.map │ │ ├── jszip-1.11.3 │ │ │ └── jszip.min.js │ │ ├── jszip-1.12.1 │ │ │ └── jszip.min.js │ │ ├── pdfmake-1.11.3 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ │ └── pdfmake-1.12.1 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ ├── vignettes_descriptive.html │ ├── vignettes_descriptive_files │ │ ├── crosstalk-1.2.0 │ │ │ ├── css │ │ │ │ └── crosstalk.min.css │ │ │ ├── js │ │ │ │ ├── crosstalk.js │ │ │ │ ├── crosstalk.js.map │ │ │ │ ├── crosstalk.min.js │ │ │ │ └── crosstalk.min.js.map │ │ │ └── scss │ │ │ │ └── crosstalk.scss │ │ ├── datatables-binding-0.20 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.23 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.24 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.27 │ │ │ └── datatables.js │ │ ├── datatables-css-0.0.0 │ │ │ └── datatables-crosstalk.css │ │ ├── dt-core-1.11.3 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-core-1.12.1 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-ext-buttons-1.11.3 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── dt-ext-buttons-1.12.1 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── figure-html │ │ │ └── unnamed-chunk-11-1.png │ │ ├── header-attrs-2.11 │ │ │ └── header-attrs.js │ │ ├── htmlwidgets-1.5.4 │ │ │ └── htmlwidgets.js │ │ ├── htmlwidgets-1.6.1 │ │ │ └── htmlwidgets.js │ │ ├── jquery-3.6.0 │ │ │ ├── jquery-3.6.0.js │ │ │ ├── jquery-3.6.0.min.js │ │ │ └── jquery-3.6.0.min.map │ │ ├── jszip-1.11.3 │ │ │ └── jszip.min.js │ │ ├── jszip-1.12.1 │ │ │ └── jszip.min.js │ │ ├── pdfmake-1.11.3 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ │ └── pdfmake-1.12.1 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ ├── vignettes_gge.html │ ├── vignettes_gge_files │ │ ├── figure-html │ │ │ ├── unnamed-chunk-10-1.png │ │ │ ├── unnamed-chunk-11-1.png │ │ │ ├── unnamed-chunk-12-1.png │ │ │ ├── unnamed-chunk-13-1.png │ │ │ ├── unnamed-chunk-4-1.png │ │ │ ├── unnamed-chunk-5-1.png │ │ │ ├── unnamed-chunk-6-1.png │ │ │ ├── unnamed-chunk-7-1.png │ │ │ ├── unnamed-chunk-8-1.png │ │ │ └── unnamed-chunk-9-1.png │ │ └── header-attrs-2.11 │ │ │ └── header-attrs.js │ ├── vignettes_helper.html │ ├── vignettes_helper_files │ │ ├── crosstalk-1.2.0 │ │ │ ├── css │ │ │ │ └── crosstalk.min.css │ │ │ ├── js │ │ │ │ ├── crosstalk.js │ │ │ │ ├── crosstalk.js.map │ │ │ │ ├── crosstalk.min.js │ │ │ │ └── crosstalk.min.js.map │ │ │ └── scss │ │ │ │ └── crosstalk.scss │ │ ├── datatables-binding-0.20 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.23 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.24 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.27 │ │ │ └── datatables.js │ │ ├── datatables-css-0.0.0 │ │ │ └── datatables-crosstalk.css │ │ ├── dt-core-1.11.3 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-core-1.12.1 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-ext-buttons-1.11.3 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── dt-ext-buttons-1.12.1 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── header-attrs-2.11 │ │ │ └── header-attrs.js │ │ ├── htmlwidgets-1.5.4 │ │ │ └── htmlwidgets.js │ │ ├── htmlwidgets-1.6.1 │ │ │ └── htmlwidgets.js │ │ ├── jquery-3.6.0 │ │ │ ├── jquery-3.6.0.js │ │ │ ├── jquery-3.6.0.min.js │ │ │ └── jquery-3.6.0.min.map │ │ ├── jszip-1.11.3 │ │ │ └── jszip.min.js │ │ ├── jszip-1.12.1 │ │ │ └── jszip.min.js │ │ ├── pdfmake-1.11.3 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ │ └── pdfmake-1.12.1 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ ├── vignettes_indexes.html │ ├── vignettes_indexes_files │ │ ├── crosstalk-1.2.0 │ │ │ ├── css │ │ │ │ └── crosstalk.min.css │ │ │ ├── js │ │ │ │ ├── crosstalk.js │ │ │ │ ├── crosstalk.js.map │ │ │ │ ├── crosstalk.min.js │ │ │ │ └── crosstalk.min.js.map │ │ │ └── scss │ │ │ │ └── crosstalk.scss │ │ ├── datatables-binding-0.20 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.23 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.24 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.27 │ │ │ └── datatables.js │ │ ├── datatables-css-0.0.0 │ │ │ └── datatables-crosstalk.css │ │ ├── dt-core-1.11.3 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-core-1.12.1 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-ext-buttons-1.11.3 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── dt-ext-buttons-1.12.1 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── figure-html │ │ │ ├── unnamed-chunk-11-1.png │ │ │ ├── unnamed-chunk-4-6.png │ │ │ ├── unnamed-chunk-6-1.png │ │ │ └── unnamed-chunk-9-1.png │ │ ├── header-attrs-2.11 │ │ │ └── header-attrs.js │ │ ├── htmlwidgets-1.5.4 │ │ │ └── htmlwidgets.js │ │ ├── htmlwidgets-1.6.1 │ │ │ └── htmlwidgets.js │ │ ├── jquery-3.6.0 │ │ │ ├── jquery-3.6.0.js │ │ │ ├── jquery-3.6.0.min.js │ │ │ └── jquery-3.6.0.min.map │ │ ├── jszip-1.11.3 │ │ │ └── jszip.min.js │ │ ├── jszip-1.12.1 │ │ │ └── jszip.min.js │ │ ├── pdfmake-1.11.3 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ │ └── pdfmake-1.12.1 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ ├── vignettes_stability.html │ ├── vignettes_stability_files │ │ ├── crosstalk-1.2.0 │ │ │ ├── css │ │ │ │ └── crosstalk.min.css │ │ │ ├── js │ │ │ │ ├── crosstalk.js │ │ │ │ ├── crosstalk.js.map │ │ │ │ ├── crosstalk.min.js │ │ │ │ └── crosstalk.min.js.map │ │ │ └── scss │ │ │ │ └── crosstalk.scss │ │ ├── datatables-binding-0.20 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.23 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.24 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.27 │ │ │ └── datatables.js │ │ ├── datatables-css-0.0.0 │ │ │ └── datatables-crosstalk.css │ │ ├── dt-core-1.11.3 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-core-1.12.1 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-ext-buttons-1.11.3 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── dt-ext-buttons-1.12.1 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── figure-html │ │ │ ├── unnamed-chunk-10-1.png │ │ │ ├── unnamed-chunk-12-1.png │ │ │ ├── unnamed-chunk-18-1.png │ │ │ ├── unnamed-chunk-2-1.png │ │ │ └── unnamed-chunk-20-1.png │ │ ├── header-attrs-2.11 │ │ │ └── header-attrs.js │ │ ├── htmlwidgets-1.5.4 │ │ │ └── htmlwidgets.js │ │ ├── htmlwidgets-1.6.1 │ │ │ └── htmlwidgets.js │ │ ├── jquery-3.6.0 │ │ │ ├── jquery-3.6.0.js │ │ │ ├── jquery-3.6.0.min.js │ │ │ └── jquery-3.6.0.min.map │ │ ├── jszip-1.11.3 │ │ │ └── jszip.min.js │ │ ├── jszip-1.12.1 │ │ │ └── jszip.min.js │ │ ├── pdfmake-1.11.3 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ │ └── pdfmake-1.12.1 │ │ │ ├── pdfmake.js │ │ │ └── vfs_fonts.js │ ├── vignettes_utilities.html │ └── vignettes_utilities_files │ │ ├── crosstalk-1.2.0 │ │ ├── css │ │ │ └── crosstalk.min.css │ │ ├── js │ │ │ ├── crosstalk.js │ │ │ ├── crosstalk.js.map │ │ │ ├── crosstalk.min.js │ │ │ └── crosstalk.min.js.map │ │ └── scss │ │ │ └── crosstalk.scss │ │ ├── datatables-binding-0.20 │ │ └── datatables.js │ │ ├── datatables-binding-0.23 │ │ └── datatables.js │ │ ├── datatables-binding-0.24 │ │ └── datatables.js │ │ ├── datatables-binding-0.27 │ │ └── datatables.js │ │ ├── datatables-css-0.0.0 │ │ └── datatables-crosstalk.css │ │ ├── dt-core-1.11.3 │ │ ├── css │ │ │ ├── jquery.dataTables.extra.css │ │ │ └── jquery.dataTables.min.css │ │ └── js │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-core-1.12.1 │ │ ├── css │ │ │ ├── jquery.dataTables.extra.css │ │ │ └── jquery.dataTables.min.css │ │ └── js │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-ext-buttons-1.11.3 │ │ ├── css │ │ │ └── buttons.dataTables.min.css │ │ └── js │ │ │ ├── buttons.colVis.min.js │ │ │ ├── buttons.html5.min.js │ │ │ ├── buttons.print.min.js │ │ │ └── dataTables.buttons.min.js │ │ ├── dt-ext-buttons-1.12.1 │ │ ├── css │ │ │ └── buttons.dataTables.min.css │ │ └── js │ │ │ ├── buttons.colVis.min.js │ │ │ ├── buttons.html5.min.js │ │ │ ├── buttons.print.min.js │ │ │ └── dataTables.buttons.min.js │ │ ├── header-attrs-2.11 │ │ └── header-attrs.js │ │ ├── htmlwidgets-1.5.4 │ │ └── htmlwidgets.js │ │ ├── htmlwidgets-1.6.1 │ │ └── htmlwidgets.js │ │ ├── jquery-3.6.0 │ │ ├── jquery-3.6.0.js │ │ ├── jquery-3.6.0.min.js │ │ └── jquery-3.6.0.min.map │ │ ├── jszip-1.11.3 │ │ └── jszip.min.js │ │ ├── jszip-1.12.1 │ │ └── jszip.min.js │ │ ├── pdfmake-1.11.3 │ │ ├── pdfmake.js │ │ └── vfs_fonts.js │ │ └── pdfmake-1.12.1 │ │ ├── pdfmake.js │ │ └── vfs_fonts.js ├── authors.html ├── bootstrap-toc.css ├── bootstrap-toc.js ├── deps │ ├── bootstrap-5.1.0 │ │ ├── bootstrap.bundle.min.js │ │ ├── bootstrap.bundle.min.js.map │ │ └── bootstrap.min.css │ ├── bootstrap-5.1.3 │ │ ├── bootstrap.bundle.min.js │ │ ├── bootstrap.bundle.min.js.map │ │ └── bootstrap.min.css │ ├── bootstrap-5.2.2 │ │ ├── bootstrap.bundle.min.js │ │ ├── bootstrap.bundle.min.js.map │ │ └── bootstrap.min.css │ ├── data-deps.txt │ └── jquery-3.6.0 │ │ ├── jquery-3.6.0.js │ │ ├── jquery-3.6.0.min.js │ │ └── jquery-3.6.0.min.map ├── docsearch.css ├── docsearch.js ├── favicon-16x16.png ├── favicon-32x32.png ├── favicon.ico ├── index.html ├── link.svg ├── logo.png ├── news │ └── index.html ├── pkgdown.css ├── pkgdown.js ├── pkgdown.yml ├── reference │ ├── Annicchiarico.html │ ├── Fox.html │ ├── Huehn.html │ ├── Rplot001.png │ ├── Rplot002.png │ ├── Rplot003.png │ ├── Rplot004.png │ ├── Schmildt.html │ ├── Select_helper.html │ ├── Shukla.html │ ├── Smith_Hazel.html │ ├── Thennarasu.html │ ├── acv.html │ ├── ammi_indexes.html │ ├── anova_ind.html │ ├── anova_joint.html │ ├── arrange_ggplot-1.png │ ├── arrange_ggplot-2.png │ ├── arrange_ggplot.html │ ├── as.lpcor.html │ ├── barplots-1.png │ ├── barplots-2.png │ ├── barplots.html │ ├── bind_cv-1.png │ ├── bind_cv.html │ ├── blup_indexes.html │ ├── can_corr.html │ ├── clustering.html │ ├── coincidence_index.html │ ├── colindiag.html │ ├── comb_vars.html │ ├── corr_ci.html │ ├── corr_coef.html │ ├── corr_focus.html │ ├── corr_plot-1.png │ ├── corr_plot-2.png │ ├── corr_plot-3.png │ ├── corr_plot-4.png │ ├── corr_plot.html │ ├── corr_ss.html │ ├── corr_stab_ind-1.png │ ├── corr_stab_ind-2.png │ ├── corr_stab_ind-3.png │ ├── corr_stab_ind.html │ ├── correlated_vars-1.png │ ├── correlated_vars.html │ ├── covcor_design.html │ ├── cv_ammi.html │ ├── cv_ammif-1.png │ ├── cv_ammif.html │ ├── cv_blup.html │ ├── data_alpha.html │ ├── data_g.html │ ├── data_ge.html │ ├── data_ge2.html │ ├── data_simula-1.png │ ├── data_simula-2.png │ ├── data_simula-3.png │ ├── data_simula.html │ ├── desc_stat.html │ ├── doo.html │ ├── ecovalence.html │ ├── env_dissimilarity.html │ ├── env_stratification.html │ ├── fai_blup.html │ ├── figures │ │ ├── README-AMMI-1.png │ │ ├── README-BLUP-1.png │ │ ├── README-GGE-1.png │ │ ├── README-INSPECT-1.png │ │ ├── lifecycle-archived.svg │ │ ├── lifecycle-defunct.svg │ │ ├── lifecycle-deprecated.svg │ │ ├── lifecycle-experimental.svg │ │ ├── lifecycle-maturing.svg │ │ ├── lifecycle-questioning.svg │ │ ├── lifecycle-stable.svg │ │ ├── lifecycle-superseded.svg │ │ ├── logo.png │ │ └── metan_cheat_sheet.png │ ├── find_outliers-1.png │ ├── find_outliers.html │ ├── gafem.html │ ├── gai.html │ ├── gamem.html │ ├── gamem_met-1.png │ ├── gamem_met.html │ ├── ge_acv.html │ ├── ge_cluster-1.png │ ├── ge_cluster.html │ ├── ge_details.html │ ├── ge_effects-1.png │ ├── ge_effects.html │ ├── ge_factanal.html │ ├── ge_means.html │ ├── ge_plot-1.png │ ├── ge_plot-2.png │ ├── ge_plot.html │ ├── ge_polar.html │ ├── ge_reg-1.png │ ├── ge_reg.html │ ├── ge_stats.html │ ├── ge_winners.html │ ├── get_corvars.html │ ├── get_covmat.html │ ├── get_dist.html │ ├── get_model_data.html │ ├── gge-1.png │ ├── gge-2.png │ ├── gge-3.png │ ├── gge.html │ ├── gtb-1.png │ ├── gtb.html │ ├── gytb-1.png │ ├── gytb.html │ ├── impute_missing_val.html │ ├── index.html │ ├── inspect-1.png │ ├── inspect.html │ ├── int.effects.html │ ├── is.lpcor.html │ ├── is_balanced_trial.html │ ├── lineplots-1.png │ ├── lineplots-2.png │ ├── lineplots.html │ ├── lpcor.html │ ├── mahala-1.png │ ├── mahala.html │ ├── mahala_design.html │ ├── make_long.html │ ├── make_mat.html │ ├── mantel_test-1.png │ ├── mantel_test.html │ ├── meansGxE.html │ ├── metan-package.html │ ├── mgidi-1.png │ ├── mgidi.html │ ├── mps.html │ ├── mtmps.html │ ├── mtsi.html │ ├── network_plot-1.png │ ├── network_plot-2.png │ ├── network_plot.html │ ├── non_collinear_vars.html │ ├── pairs_mantel.html │ ├── path_coeff-1.png │ ├── path_coeff.html │ ├── performs_ammi-1.png │ ├── performs_ammi-2.png │ ├── performs_ammi-3.png │ ├── performs_ammi-4.png │ ├── performs_ammi.html │ ├── pipe.html │ ├── plot.anova_joint-1.png │ ├── plot.anova_joint-2.png │ ├── plot.anova_joint.html │ ├── plot.can_cor-1.png │ ├── plot.can_cor-2.png │ ├── plot.can_cor.html │ ├── plot.clustering-1.png │ ├── plot.clustering.html │ ├── plot.corr_coef-1.png │ ├── plot.corr_coef-2.png │ ├── plot.corr_coef-3.png │ ├── plot.corr_coef.html │ ├── plot.correlated_vars-1.png │ ├── plot.correlated_vars.html │ ├── plot.cvalidation-1.png │ ├── plot.cvalidation.html │ ├── plot.env_dissimilarity-1.png │ ├── plot.env_dissimilarity.html │ ├── plot.env_stratification-1.png │ ├── plot.env_stratification.html │ ├── plot.fai_blup-1.png │ ├── plot.fai_blup.html │ ├── plot.gafem-1.png │ ├── plot.gafem-2.png │ ├── plot.gafem.html │ ├── plot.gamem-1.png │ ├── plot.gamem.html │ ├── plot.ge_cluster.html │ ├── plot.ge_effects-1.png │ ├── plot.ge_effects.html │ ├── plot.ge_factanal-1.png │ ├── plot.ge_factanal-2.png │ ├── plot.ge_factanal.html │ ├── plot.ge_reg-1.png │ ├── plot.ge_reg.html │ ├── plot.gge-1.png │ ├── plot.gge-2.png │ ├── plot.gge.html │ ├── plot.mgidi-1.png │ ├── plot.mgidi.html │ ├── plot.mtmps-1.png │ ├── plot.mtmps.html │ ├── plot.mtsi-1.png │ ├── plot.mtsi.html │ ├── plot.path_coeff-1.png │ ├── plot.path_coeff-2.png │ ├── plot.path_coeff-3.png │ ├── plot.path_coeff.html │ ├── plot.performs_ammi-1.png │ ├── plot.performs_ammi-2.png │ ├── plot.performs_ammi.html │ ├── plot.resp_surf-1.png │ ├── plot.resp_surf.html │ ├── plot.sh-1.png │ ├── plot.sh.html │ ├── plot.waas-1.png │ ├── plot.waas-2.png │ ├── plot.waas.html │ ├── plot.waasb-1.png │ ├── plot.waasb.html │ ├── plot.wsmp-1.png │ ├── plot.wsmp.html │ ├── plot_blup-1.png │ ├── plot_blup-2.png │ ├── plot_blup.html │ ├── plot_ci-1.png │ ├── plot_ci-2.png │ ├── plot_ci.html │ ├── plot_eigen-1.png │ ├── plot_eigen.html │ ├── plot_scores-1.png │ ├── plot_scores-2.png │ ├── plot_scores-3.png │ ├── plot_scores-4.png │ ├── plot_scores.html │ ├── plot_waasby-1.png │ ├── plot_waasby-2.png │ ├── plot_waasby.html │ ├── predict.gamem.html │ ├── predict.gge.html │ ├── predict.performs_ammi.html │ ├── predict.waas.html │ ├── predict.waasb.html │ ├── print.Annicchiarico.html │ ├── print.Fox.html │ ├── print.Huehn.html │ ├── print.Schmildt.html │ ├── print.Shukla.html │ ├── print.Thennarasu.html │ ├── print.ammi_indexes.html │ ├── print.anova_ind.html │ ├── print.anova_joint.html │ ├── print.can_cor.html │ ├── print.coincidence.html │ ├── print.colindiag.html │ ├── print.corr_coef.html │ ├── print.ecovalence.html │ ├── print.env_dissimilarity.html │ ├── print.env_stratification.html │ ├── print.gamem.html │ ├── print.ge_factanal.html │ ├── print.ge_reg.html │ ├── print.ge_stats.html │ ├── print.lpcor.html │ ├── print.mgidi.html │ ├── print.mtmps.html │ ├── print.mtsi.html │ ├── print.path_coeff.html │ ├── print.performs_ammi.html │ ├── print.sh.html │ ├── print.superiority.html │ ├── print.waas.html │ ├── print.waas_means.html │ ├── print.waasb.html │ ├── reexports.html │ ├── reorder_cormat.html │ ├── resca.html │ ├── residual_plots-1.png │ ├── residual_plots-2.png │ ├── residual_plots-3.png │ ├── residual_plots.html │ ├── resp_surf-1.png │ ├── resp_surf.html │ ├── select_pred.html │ ├── set_wd_here.html │ ├── solve_svd.html │ ├── split_factors.html │ ├── stars_pval.html │ ├── superiority.html │ ├── themes.html │ ├── tidyeval.html │ ├── transpose_df.html │ ├── tukey_hsd.html │ ├── utils_as.html │ ├── utils_bind.html │ ├── utils_class.html │ ├── utils_data.html │ ├── utils_data_org.html │ ├── utils_mat.html │ ├── utils_na_zero.html │ ├── utils_num_str.html │ ├── utils_progress-1.png │ ├── utils_progress.html │ ├── utils_rows_cols.html │ ├── utils_samples.html │ ├── utils_sets.html │ ├── utils_stats.html │ ├── utils_wd.html │ ├── venn_plot-1.png │ ├── venn_plot-2.png │ ├── venn_plot-3.png │ ├── venn_plot-4.png │ ├── venn_plot.html │ ├── waas-1.png │ ├── waas-2.png │ ├── waas.html │ ├── waas_means.html │ ├── waasb-1.png │ ├── waasb-2.png │ ├── waasb.html │ └── wsmp.html ├── search.json └── sitemap.xml ├── inst └── CITATION ├── man ├── AMMI_indexes.Rd ├── Annicchiarico.Rd ├── Fox.Rd ├── Huehn.Rd ├── Schmildt.Rd ├── Select_helper.Rd ├── Shukla.Rd ├── Smith_Hazel.Rd ├── Thennarasu.Rd ├── acv.Rd ├── anova_ind.Rd ├── anova_joint.Rd ├── arrange_ggplot.Rd ├── as.lpcor.Rd ├── barplots.Rd ├── bind_cv.Rd ├── blup_indexes.Rd ├── can_corr.Rd ├── clustering.Rd ├── coincidence_index.Rd ├── colindiag.Rd ├── comb_vars.Rd ├── corr_ci.Rd ├── corr_coef.Rd ├── corr_focus.Rd ├── corr_plot.Rd ├── corr_ss.Rd ├── corr_stab_ind.Rd ├── correlated_vars.Rd ├── covcor_design.Rd ├── cv_ammi.Rd ├── cv_ammif.Rd ├── cv_blup.Rd ├── data_alpha.Rd ├── data_g.Rd ├── data_ge.Rd ├── data_ge2.Rd ├── data_simula.Rd ├── desc_stat.Rd ├── doo.Rd ├── ecovalence.Rd ├── env_dissimilarity.Rd ├── env_stratification.Rd ├── fai_blup.Rd ├── figures │ ├── README-AMMI-1.png │ ├── README-BLUP-1.png │ ├── README-GGE-1.png │ ├── README-INSPECT-1.png │ ├── lifecycle-archived.svg │ ├── lifecycle-defunct.svg │ ├── lifecycle-deprecated.svg │ ├── lifecycle-experimental.svg │ ├── lifecycle-maturing.svg │ ├── lifecycle-questioning.svg │ ├── lifecycle-stable.svg │ ├── lifecycle-superseded.svg │ ├── logo.png │ └── metan_cheat_sheet.png ├── find_outliers.Rd ├── gafem.Rd ├── gai.Rd ├── gamem.Rd ├── gamem_met.Rd ├── ge_acv.Rd ├── ge_cluster.Rd ├── ge_details.Rd ├── ge_effects.Rd ├── ge_factanal.Rd ├── ge_means.Rd ├── ge_plot.Rd ├── ge_polar.Rd ├── ge_reg.Rd ├── ge_stats.Rd ├── ge_winners.Rd ├── get_corvars.Rd ├── get_covmat.Rd ├── get_dist.Rd ├── get_model_data.Rd ├── gge.Rd ├── gtb.Rd ├── gytb.Rd ├── impute_missing_val.Rd ├── inspect.Rd ├── int.effects.Rd ├── is.lpcor.Rd ├── is_balanced_trial.Rd ├── lineplots.Rd ├── lpcor.Rd ├── mahala.Rd ├── mahala_design.Rd ├── make_long.Rd ├── make_mat.Rd ├── mantel_test.Rd ├── meansGxE.Rd ├── metan-package.Rd ├── mgidi.Rd ├── mps.Rd ├── mtmps.Rd ├── mtsi.Rd ├── network_plot.Rd ├── non_collinear_vars.Rd ├── pairs_mantel.Rd ├── path_coeff.Rd ├── performs_ammi.Rd ├── pipe.Rd ├── plaisted_peterson.Rd ├── plot.anova_joint.Rd ├── plot.can_cor.Rd ├── plot.clustering.Rd ├── plot.corr_coef.Rd ├── plot.correlated_vars.Rd ├── plot.cvalidation.Rd ├── plot.env_dissimilarity.Rd ├── plot.env_stratification.Rd ├── plot.fai_blup.Rd ├── plot.gafem.Rd ├── plot.gamem.Rd ├── plot.ge_cluster.Rd ├── plot.ge_effects.Rd ├── plot.ge_factanal.Rd ├── plot.ge_reg.Rd ├── plot.gge.Rd ├── plot.mgidi.Rd ├── plot.mtmps.Rd ├── plot.mtsi.Rd ├── plot.path_coeff.Rd ├── plot.performs_ammi.Rd ├── plot.resp_surf.Rd ├── plot.sh.Rd ├── plot.waas.Rd ├── plot.waasb.Rd ├── plot.wsmp.Rd ├── plot_blup.Rd ├── plot_ci.Rd ├── plot_eigen.Rd ├── plot_scores.Rd ├── plot_waasby.Rd ├── predict.gamem.Rd ├── predict.gge.Rd ├── predict.performs_ammi.Rd ├── predict.waas.Rd ├── predict.waasb.Rd ├── print.AMMI_indexes.Rd ├── print.Annicchiarico.Rd ├── print.Fox.Rd ├── print.Huehn.Rd ├── print.Schmildt.Rd ├── print.Shukla.Rd ├── print.Thennarasu.Rd ├── print.anova_ind.Rd ├── print.anova_joint.Rd ├── print.can_cor.Rd ├── print.coincidence.Rd ├── print.colindiag.Rd ├── print.corr_coef.Rd ├── print.ecovalence.Rd ├── print.env_dissimilarity.Rd ├── print.env_stratification.Rd ├── print.gamem.Rd ├── print.ge_factanal.Rd ├── print.ge_reg.Rd ├── print.ge_stats.Rd ├── print.lpcor.Rd ├── print.mgidi.Rd ├── print.mtmps.Rd ├── print.mtsi.Rd ├── print.path_coeff.Rd ├── print.performs_ammi.Rd ├── print.plaisted_peterson.Rd ├── print.sh.Rd ├── print.superiority.Rd ├── print.waas.Rd ├── print.waas_means.Rd ├── print.waasb.Rd ├── reexports.Rd ├── reorder_cormat.Rd ├── resca.Rd ├── residual_plots.Rd ├── resp_surf.Rd ├── select_pred.Rd ├── solve_svd.Rd ├── split_factors.Rd ├── stars_pval.Rd ├── superiority.Rd ├── themes.Rd ├── tidyeval.Rd ├── transpose_df.Rd ├── tukey_hsd.Rd ├── utils_as.Rd ├── utils_bind.Rd ├── utils_class.Rd ├── utils_data.Rd ├── utils_data_org.Rd ├── utils_mat.Rd ├── utils_na_zero.Rd ├── utils_num_str.Rd ├── utils_progress.Rd ├── utils_rows_cols.Rd ├── utils_samples.Rd ├── utils_sets.Rd ├── utils_stats.Rd ├── utils_wd.Rd ├── venn_plot.Rd ├── 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