├── .Rbuildignore ├── .github ├── .gitignore ├── ISSUE_TEMPLATE │ ├── bug_report.md │ └── feature_request.md └── workflows │ └── R-CMD-check.yaml ├── .gitignore ├── DESCRIPTION ├── DTUrtle.Rproj ├── LICENSE ├── NAMESPACE ├── NEWS.md ├── R ├── DTUrtle-package.R ├── dge_analysis.R ├── dtu_analysis.R ├── sc_support.R ├── utility_functions.R └── visualization.R ├── README.md ├── docs ├── 404.html ├── LICENSE-text.html ├── apple-touch-icon-120x120.png ├── apple-touch-icon-152x152.png ├── apple-touch-icon-180x180.png ├── apple-touch-icon-60x60.png ├── apple-touch-icon-76x76.png ├── apple-touch-icon.png ├── articles │ ├── Hoffman_human_bulk_analysis.html │ ├── Hoffman_human_bulk_analysis_files │ │ ├── anchor-sections-1.0 │ │ │ ├── anchor-sections.css │ │ │ └── anchor-sections.js │ │ ├── crosstalk-1.1.0.1 │ │ │ ├── css │ │ │ │ └── crosstalk.css │ │ │ └── js │ │ │ │ ├── crosstalk.js │ │ │ │ ├── crosstalk.js.map │ │ │ │ ├── crosstalk.min.js │ │ │ │ └── crosstalk.min.js.map │ │ ├── datatables-binding-0.13 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.16 │ │ │ └── datatables.js │ │ ├── datatables-css-0.0.0 │ │ │ └── datatables-crosstalk.css │ │ ├── dt-core-1.10.20 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-ext-buttons-1.10.20 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.flash.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── figure-html │ │ │ ├── unnamed-chunk-21-1.png │ │ │ ├── unnamed-chunk-24-1.png │ │ │ ├── unnamed-chunk-25-1.png │ │ │ ├── unnamed-chunk-27-1.png │ │ │ ├── unnamed-chunk-28-1.png │ │ │ └── unnamed-chunk-31-1.png │ │ ├── htmlwidgets-1.5.1 │ │ │ └── htmlwidgets.js │ │ ├── htmlwidgets-1.5.2 │ │ │ └── htmlwidgets.js │ │ ├── jquery-1.12.4 │ │ │ ├── LICENSE.txt │ │ │ └── jquery.min.js │ │ ├── jszip-1.10.20 │ │ │ └── jszip.min.js │ │ ├── nouislider-7.0.10 │ │ │ ├── jquery.nouislider.min.css │ │ │ └── jquery.nouislider.min.js │ │ └── selectize-0.12.0 │ │ │ ├── selectize.bootstrap3.css │ │ │ └── selectize.min.js │ ├── Hoffman_human_bulk_preprocess.html │ ├── Hoffman_human_bulk_preprocess_files │ │ └── anchor-sections-1.0 │ │ │ ├── anchor-sections.css │ │ │ └── anchor-sections.js │ ├── Hoffman_human_single-cell_analysis.html │ ├── Hoffman_human_single-cell_analysis_files │ │ ├── anchor-sections-1.0 │ │ │ ├── anchor-sections.css │ │ │ └── anchor-sections.js │ │ ├── crosstalk-1.1.0.1 │ │ │ ├── css │ │ │ │ └── crosstalk.css │ │ │ └── js │ │ │ │ ├── crosstalk.js │ │ │ │ ├── crosstalk.js.map │ │ │ │ ├── crosstalk.min.js │ │ │ │ └── crosstalk.min.js.map │ │ ├── datatables-binding-0.13 │ │ │ └── datatables.js │ │ ├── datatables-binding-0.16 │ │ │ └── datatables.js │ │ ├── datatables-css-0.0.0 │ │ │ └── datatables-crosstalk.css │ │ ├── dt-core-1.10.20 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-ext-buttons-1.10.20 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.flash.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── figure-html │ │ │ ├── unnamed-chunk-22-1.png │ │ │ ├── unnamed-chunk-25-1.png │ │ │ ├── unnamed-chunk-28-1.png │ │ │ ├── unnamed-chunk-29-1.png │ │ │ ├── unnamed-chunk-32-1.png │ │ │ ├── unnamed-chunk-35-1.png │ │ │ ├── unnamed-chunk-36-1.png │ │ │ ├── unnamed-chunk-37-1.png │ │ │ ├── unnamed-chunk-38-1.png │ │ │ ├── unnamed-chunk-41-1.png │ │ │ ├── unnamed-chunk-42-1.png │ │ │ ├── unnamed-chunk-44-1.png │ │ │ ├── unnamed-chunk-45-1.png │ │ │ └── unnamed-chunk-49-1.png │ │ ├── htmlwidgets-1.5.1 │ │ │ └── htmlwidgets.js │ │ ├── htmlwidgets-1.5.2 │ │ │ └── htmlwidgets.js │ │ ├── jquery-1.12.4 │ │ │ ├── LICENSE.txt │ │ │ └── jquery.min.js │ │ ├── jszip-1.10.20 │ │ │ └── jszip.min.js │ │ ├── nouislider-7.0.10 │ │ │ ├── jquery.nouislider.min.css │ │ │ └── jquery.nouislider.min.js │ │ └── selectize-0.12.0 │ │ │ ├── selectize.bootstrap3.css │ │ │ └── selectize.min.js │ ├── Hoffman_human_single-cell_preprocess.html │ ├── Hoffman_human_single-cell_preprocess_files │ │ └── anchor-sections-1.0 │ │ │ ├── anchor-sections.css │ │ │ └── anchor-sections.js │ ├── Tabular_Muris_mouse_single-cell_analysis.html │ ├── Tabular_Muris_mouse_single-cell_analysis_files │ │ ├── anchor-sections-1.0 │ │ │ ├── anchor-sections.css │ │ │ └── anchor-sections.js │ │ ├── crosstalk-1.1.0.1 │ │ │ ├── css │ │ │ │ └── crosstalk.css │ │ │ └── js │ │ │ │ ├── crosstalk.js │ │ │ │ ├── crosstalk.js.map │ │ │ │ ├── crosstalk.min.js │ │ │ │ └── crosstalk.min.js.map │ │ ├── datatables-binding-0.16 │ │ │ └── datatables.js │ │ ├── datatables-css-0.0.0 │ │ │ └── datatables-crosstalk.css │ │ ├── dt-core-1.10.20 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-ext-buttons-1.10.20 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.flash.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── figure-html │ │ │ ├── unnamed-chunk-24-1.png │ │ │ ├── unnamed-chunk-27-1.png │ │ │ ├── unnamed-chunk-30-1.png │ │ │ ├── unnamed-chunk-32-1.png │ │ │ ├── unnamed-chunk-34-1.png │ │ │ ├── unnamed-chunk-35-1.png │ │ │ ├── unnamed-chunk-38-1.png │ │ │ ├── unnamed-chunk-42-1.png │ │ │ ├── unnamed-chunk-56-1.png │ │ │ ├── unnamed-chunk-57-1.png │ │ │ ├── unnamed-chunk-57-2.png │ │ │ ├── unnamed-chunk-64-1.png │ │ │ ├── unnamed-chunk-65-1.png │ │ │ └── unnamed-chunk-65-2.png │ │ ├── htmlwidgets-1.5.2 │ │ │ └── htmlwidgets.js │ │ ├── jquery-1.12.4 │ │ │ ├── LICENSE.txt │ │ │ └── jquery.min.js │ │ ├── jszip-1.10.20 │ │ │ └── jszip.min.js │ │ ├── nouislider-7.0.10 │ │ │ ├── jquery.nouislider.min.css │ │ │ └── jquery.nouislider.min.js │ │ └── selectize-0.12.0 │ │ │ ├── selectize.bootstrap3.css │ │ │ └── selectize.min.js │ ├── Tabular_Muris_mouse_single-cell_preprocess.html │ ├── Tabular_Muris_mouse_single-cell_preprocess_files │ │ └── anchor-sections-1.0 │ │ │ ├── anchor-sections.css │ │ │ └── anchor-sections.js │ ├── Wuidart_mouse_single-cell_analysis.html │ ├── Wuidart_mouse_single-cell_analysis_files │ │ ├── anchor-sections-1.0 │ │ │ ├── anchor-sections.css │ │ │ └── anchor-sections.js │ │ ├── crosstalk-1.1.0.1 │ │ │ ├── css │ │ │ │ └── crosstalk.css │ │ │ └── js │ │ │ │ ├── crosstalk.js │ │ │ │ ├── crosstalk.js.map │ │ │ │ ├── crosstalk.min.js │ │ │ │ └── crosstalk.min.js.map │ │ ├── datatables-binding-0.16 │ │ │ └── datatables.js │ │ ├── datatables-css-0.0.0 │ │ │ └── datatables-crosstalk.css │ │ ├── dt-core-1.10.20 │ │ │ ├── css │ │ │ │ ├── jquery.dataTables.extra.css │ │ │ │ └── jquery.dataTables.min.css │ │ │ └── js │ │ │ │ └── jquery.dataTables.min.js │ │ ├── dt-ext-buttons-1.10.20 │ │ │ ├── css │ │ │ │ └── buttons.dataTables.min.css │ │ │ └── js │ │ │ │ ├── buttons.colVis.min.js │ │ │ │ ├── buttons.flash.min.js │ │ │ │ ├── buttons.html5.min.js │ │ │ │ ├── buttons.print.min.js │ │ │ │ └── dataTables.buttons.min.js │ │ ├── figure-html │ │ │ ├── unnamed-chunk-33-1.png │ │ │ ├── unnamed-chunk-36-1.png │ │ │ └── unnamed-chunk-39-1.png │ │ ├── htmlwidgets-1.5.2 │ │ │ └── htmlwidgets.js │ │ ├── jquery-1.12.4 │ │ │ ├── LICENSE.txt │ │ │ └── jquery.min.js │ │ ├── jszip-1.10.20 │ │ │ └── jszip.min.js │ │ ├── nouislider-7.0.10 │ │ │ ├── jquery.nouislider.min.css │ │ │ └── jquery.nouislider.min.js │ │ └── selectize-0.12.0 │ │ │ ├── selectize.bootstrap3.css │ │ │ └── selectize.min.js │ ├── Wuidart_mouse_single-cell_preprocess.html │ ├── Wuidart_mouse_single-cell_preprocess_files │ │ └── anchor-sections-1.0 │ │ │ ├── anchor-sections.css │ │ │ └── anchor-sections.js │ └── index.html ├── authors.html ├── bootstrap-toc.css ├── bootstrap-toc.js ├── docsearch.css ├── docsearch.js ├── docsearch.json ├── favicon-16x16.png ├── favicon-32x32.png ├── favicon.ico ├── index.html ├── link.svg ├── logo.svg ├── news │ └── index.html ├── pkgdown.css ├── pkgdown.js ├── pkgdown.yml ├── reference │ ├── Rplot001.png │ ├── check_unique_by_partition.html │ ├── combine_to_matrix.html │ ├── create_dtu_table.html │ ├── dataframe_to_partitioning.html │ ├── dturtle_logo.html │ ├── figures │ │ ├── DTUrtle_workflow.svg │ │ ├── lifecycle-archived.svg │ │ ├── lifecycle-defunct.svg │ │ ├── lifecycle-deprecated.svg │ │ ├── lifecycle-experimental.svg │ │ ├── lifecycle-maturing.svg │ │ ├── lifecycle-questioning.svg │ │ ├── lifecycle-soft-deprecated.svg │ │ ├── lifecycle-stable.svg │ │ ├── lifecycle-superseded.svg │ │ └── logo.svg │ ├── filter_messages.html │ ├── get_by_partition.html │ ├── get_diff.html │ ├── get_html_header.html │ ├── get_proportion_matrix.html │ ├── getmax.html │ ├── granges_reduce_introns.html │ ├── import_counts.html │ ├── import_dge_counts.html │ ├── import_gtf.html │ ├── index.html │ ├── merge_sparse.html │ ├── move_columns_to_front.html │ ├── no_na.html │ ├── one_to_one_mapping.html │ ├── partitioning_to_dataframe.html │ ├── plot_dimensional_reduction.html │ ├── plot_dtu_table.html │ ├── plot_proportion_barplot.html │ ├── plot_proportion_pheatmap.html │ ├── plot_transcripts_view.html │ ├── posthoc_and_stager.html │ ├── priming_bias_detection_probability.html │ ├── prop_matrix.html │ ├── ratio_expression_in.html │ ├── readin_bustools.html │ ├── rm_version.html │ ├── run_deseq2.html │ ├── run_drimseq.html │ ├── run_posthoc.html │ ├── seurat_add_tx2gene.html │ ├── smallProportionSD.html │ ├── sparse_division.html │ ├── sparse_filter.html │ ├── summarize_to_gene.html │ ├── table_percentage_bar.html │ └── table_pval_tile.html └── sitemap.xml ├── inst ├── CITATION └── logo │ └── logo.svg ├── man ├── check_unique_by_partition.Rd ├── combine_to_matrix.Rd ├── create_dtu_table.Rd ├── dataframe_to_partitioning.Rd ├── dturtle_logo.Rd ├── figures │ ├── DTUrtle_workflow.svg │ ├── lifecycle-archived.svg │ ├── lifecycle-defunct.svg │ ├── lifecycle-deprecated.svg │ ├── lifecycle-experimental.svg │ ├── lifecycle-maturing.svg │ ├── lifecycle-questioning.svg │ ├── lifecycle-soft-deprecated.svg │ ├── lifecycle-stable.svg │ ├── lifecycle-superseded.svg │ └── logo.svg ├── filter_messages.Rd ├── get_by_partition.Rd ├── get_diff.Rd ├── get_html_header.Rd ├── get_proportion_matrix.Rd ├── getmax.Rd ├── granges_reduce_introns.Rd ├── import_counts.Rd ├── import_dge_counts.Rd ├── import_gtf.Rd ├── merge_sparse.Rd ├── move_columns_to_front.Rd ├── no_na.Rd ├── one_to_one_mapping.Rd ├── partitioning_to_dataframe.Rd ├── plot_dimensional_reduction.Rd ├── plot_dtu_table.Rd ├── plot_proportion_barplot.Rd ├── plot_proportion_pheatmap.Rd ├── plot_transcripts_view.Rd ├── posthoc_and_stager.Rd ├── priming_bias_detection_probability.Rd ├── prop_matrix.Rd ├── ratio_expression_in.Rd ├── readin_bustools.Rd ├── rm_version.Rd ├── run_deseq2.Rd ├── run_drimseq.Rd ├── run_posthoc.Rd ├── seurat_add_tx2gene.Rd ├── smallProportionSD.Rd ├── sparse_filter.Rd ├── summarize_to_gene.Rd ├── table_percentage_bar.Rd └── table_pval_tile.Rd ├── pkgdown ├── _pkgdown.yml └── favicon │ ├── apple-touch-icon-120x120.png │ ├── apple-touch-icon-152x152.png │ ├── apple-touch-icon-180x180.png │ ├── apple-touch-icon-60x60.png │ ├── apple-touch-icon-76x76.png │ ├── apple-touch-icon.png │ ├── favicon-16x16.png │ ├── favicon-32x32.png │ └── favicon.ico └── vignettes ├── Hoffman_human_bulk_analysis.Rmd ├── Hoffman_human_bulk_preprocess.Rmd ├── Hoffman_human_single-cell_analysis.Rmd ├── Hoffman_human_single-cell_preprocess.Rmd ├── Tabular_Muris_mouse_single-cell_analysis.Rmd ├── Tabular_Muris_mouse_single-cell_preprocess.Rmd ├── Wuidart_mouse_single-cell_analysis.Rmd └── Wuidart_mouse_single-cell_preprocess.Rmd /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.github/.gitignore: -------------------------------------------------------------------------------- 1 | *.html 2 | -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE/bug_report.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/.github/ISSUE_TEMPLATE/bug_report.md -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE/feature_request.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/.github/ISSUE_TEMPLATE/feature_request.md -------------------------------------------------------------------------------- /.github/workflows/R-CMD-check.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/.github/workflows/R-CMD-check.yaml -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/.gitignore -------------------------------------------------------------------------------- /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /DTUrtle.Rproj: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/DTUrtle.Rproj -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/LICENSE -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/NAMESPACE -------------------------------------------------------------------------------- /NEWS.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/NEWS.md -------------------------------------------------------------------------------- /R/DTUrtle-package.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/R/DTUrtle-package.R -------------------------------------------------------------------------------- /R/dge_analysis.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/R/dge_analysis.R -------------------------------------------------------------------------------- /R/dtu_analysis.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/R/dtu_analysis.R -------------------------------------------------------------------------------- /R/sc_support.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/R/sc_support.R -------------------------------------------------------------------------------- /R/utility_functions.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/R/utility_functions.R -------------------------------------------------------------------------------- /R/visualization.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/R/visualization.R -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/README.md -------------------------------------------------------------------------------- /docs/404.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/404.html -------------------------------------------------------------------------------- /docs/LICENSE-text.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/LICENSE-text.html -------------------------------------------------------------------------------- /docs/apple-touch-icon-120x120.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/apple-touch-icon-120x120.png -------------------------------------------------------------------------------- /docs/apple-touch-icon-152x152.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/apple-touch-icon-152x152.png -------------------------------------------------------------------------------- /docs/apple-touch-icon-180x180.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/apple-touch-icon-180x180.png -------------------------------------------------------------------------------- /docs/apple-touch-icon-60x60.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/apple-touch-icon-60x60.png -------------------------------------------------------------------------------- /docs/apple-touch-icon-76x76.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/apple-touch-icon-76x76.png -------------------------------------------------------------------------------- /docs/apple-touch-icon.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/apple-touch-icon.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis.html -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/anchor-sections-1.0/anchor-sections.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/anchor-sections-1.0/anchor-sections.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/anchor-sections-1.0/anchor-sections.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/anchor-sections-1.0/anchor-sections.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/crosstalk-1.1.0.1/css/crosstalk.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/crosstalk-1.1.0.1/css/crosstalk.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js.map -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js.map -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/datatables-binding-0.13/datatables.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/datatables-binding-0.13/datatables.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/datatables-binding-0.16/datatables.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/datatables-binding-0.16/datatables.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/datatables-css-0.0.0/datatables-crosstalk.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/datatables-css-0.0.0/datatables-crosstalk.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/dt-core-1.10.20/css/jquery.dataTables.extra.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/dt-core-1.10.20/css/jquery.dataTables.extra.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/dt-core-1.10.20/css/jquery.dataTables.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/dt-core-1.10.20/css/jquery.dataTables.min.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/dt-core-1.10.20/js/jquery.dataTables.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/dt-core-1.10.20/js/jquery.dataTables.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/dt-ext-buttons-1.10.20/css/buttons.dataTables.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/dt-ext-buttons-1.10.20/css/buttons.dataTables.min.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/dt-ext-buttons-1.10.20/js/buttons.colVis.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/dt-ext-buttons-1.10.20/js/buttons.colVis.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/dt-ext-buttons-1.10.20/js/buttons.flash.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/dt-ext-buttons-1.10.20/js/buttons.flash.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/dt-ext-buttons-1.10.20/js/buttons.html5.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/dt-ext-buttons-1.10.20/js/buttons.html5.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/dt-ext-buttons-1.10.20/js/buttons.print.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/dt-ext-buttons-1.10.20/js/buttons.print.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/dt-ext-buttons-1.10.20/js/dataTables.buttons.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/dt-ext-buttons-1.10.20/js/dataTables.buttons.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/figure-html/unnamed-chunk-21-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/figure-html/unnamed-chunk-21-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/figure-html/unnamed-chunk-24-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/figure-html/unnamed-chunk-24-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/figure-html/unnamed-chunk-25-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/figure-html/unnamed-chunk-25-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/figure-html/unnamed-chunk-27-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/figure-html/unnamed-chunk-27-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/figure-html/unnamed-chunk-28-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/figure-html/unnamed-chunk-28-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/figure-html/unnamed-chunk-31-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/figure-html/unnamed-chunk-31-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/htmlwidgets-1.5.1/htmlwidgets.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/htmlwidgets-1.5.1/htmlwidgets.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/htmlwidgets-1.5.2/htmlwidgets.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/htmlwidgets-1.5.2/htmlwidgets.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/jquery-1.12.4/LICENSE.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/jquery-1.12.4/LICENSE.txt -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/jquery-1.12.4/jquery.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/jquery-1.12.4/jquery.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/jszip-1.10.20/jszip.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/jszip-1.10.20/jszip.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/nouislider-7.0.10/jquery.nouislider.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/nouislider-7.0.10/jquery.nouislider.min.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/nouislider-7.0.10/jquery.nouislider.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/nouislider-7.0.10/jquery.nouislider.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/selectize-0.12.0/selectize.bootstrap3.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/selectize-0.12.0/selectize.bootstrap3.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_analysis_files/selectize-0.12.0/selectize.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_analysis_files/selectize-0.12.0/selectize.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_preprocess.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_preprocess.html -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_preprocess_files/anchor-sections-1.0/anchor-sections.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_preprocess_files/anchor-sections-1.0/anchor-sections.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_bulk_preprocess_files/anchor-sections-1.0/anchor-sections.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_bulk_preprocess_files/anchor-sections-1.0/anchor-sections.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis.html -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/anchor-sections-1.0/anchor-sections.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/anchor-sections-1.0/anchor-sections.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/anchor-sections-1.0/anchor-sections.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/anchor-sections-1.0/anchor-sections.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/crosstalk-1.1.0.1/css/crosstalk.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/crosstalk-1.1.0.1/css/crosstalk.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js.map -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js.map -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/datatables-binding-0.13/datatables.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/datatables-binding-0.13/datatables.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/datatables-binding-0.16/datatables.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/datatables-binding-0.16/datatables.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/datatables-css-0.0.0/datatables-crosstalk.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/datatables-css-0.0.0/datatables-crosstalk.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/dt-core-1.10.20/css/jquery.dataTables.extra.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/dt-core-1.10.20/css/jquery.dataTables.extra.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/dt-core-1.10.20/css/jquery.dataTables.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/dt-core-1.10.20/css/jquery.dataTables.min.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/dt-core-1.10.20/js/jquery.dataTables.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/dt-core-1.10.20/js/jquery.dataTables.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/dt-ext-buttons-1.10.20/css/buttons.dataTables.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/dt-ext-buttons-1.10.20/css/buttons.dataTables.min.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.colVis.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.colVis.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.flash.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.flash.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.html5.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.html5.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.print.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.print.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/dataTables.buttons.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/dataTables.buttons.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-22-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-22-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-25-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-25-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-28-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-28-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-29-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-29-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-32-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-32-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-35-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-35-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-36-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-36-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-37-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-37-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-38-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-38-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-41-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-41-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-42-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-42-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-44-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-44-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-45-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-45-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-49-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/figure-html/unnamed-chunk-49-1.png -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/htmlwidgets-1.5.1/htmlwidgets.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/htmlwidgets-1.5.1/htmlwidgets.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/htmlwidgets-1.5.2/htmlwidgets.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/htmlwidgets-1.5.2/htmlwidgets.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/jquery-1.12.4/LICENSE.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/jquery-1.12.4/LICENSE.txt -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/jquery-1.12.4/jquery.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/jquery-1.12.4/jquery.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/jszip-1.10.20/jszip.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/jszip-1.10.20/jszip.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/nouislider-7.0.10/jquery.nouislider.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/nouislider-7.0.10/jquery.nouislider.min.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/nouislider-7.0.10/jquery.nouislider.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/nouislider-7.0.10/jquery.nouislider.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/selectize-0.12.0/selectize.bootstrap3.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/selectize-0.12.0/selectize.bootstrap3.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_analysis_files/selectize-0.12.0/selectize.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_analysis_files/selectize-0.12.0/selectize.min.js -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_preprocess.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_preprocess.html -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_preprocess_files/anchor-sections-1.0/anchor-sections.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_preprocess_files/anchor-sections-1.0/anchor-sections.css -------------------------------------------------------------------------------- /docs/articles/Hoffman_human_single-cell_preprocess_files/anchor-sections-1.0/anchor-sections.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Hoffman_human_single-cell_preprocess_files/anchor-sections-1.0/anchor-sections.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis.html -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/anchor-sections-1.0/anchor-sections.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/anchor-sections-1.0/anchor-sections.css -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/anchor-sections-1.0/anchor-sections.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/anchor-sections-1.0/anchor-sections.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/css/crosstalk.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/css/crosstalk.css -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js.map -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js.map -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/datatables-binding-0.16/datatables.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/datatables-binding-0.16/datatables.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/datatables-css-0.0.0/datatables-crosstalk.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/datatables-css-0.0.0/datatables-crosstalk.css -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-core-1.10.20/css/jquery.dataTables.extra.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-core-1.10.20/css/jquery.dataTables.extra.css -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-core-1.10.20/css/jquery.dataTables.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-core-1.10.20/css/jquery.dataTables.min.css -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-core-1.10.20/js/jquery.dataTables.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-core-1.10.20/js/jquery.dataTables.min.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/css/buttons.dataTables.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/css/buttons.dataTables.min.css -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.colVis.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.colVis.min.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.flash.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.flash.min.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.html5.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.html5.min.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.print.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.print.min.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/dataTables.buttons.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/dataTables.buttons.min.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-24-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-24-1.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-27-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-27-1.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-30-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-30-1.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-32-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-32-1.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-34-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-34-1.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-35-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-35-1.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-38-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-38-1.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-42-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-42-1.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-56-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-56-1.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-57-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-57-1.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-57-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-57-2.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-64-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-64-1.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-65-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-65-1.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-65-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-65-2.png -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/htmlwidgets-1.5.2/htmlwidgets.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/htmlwidgets-1.5.2/htmlwidgets.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/jquery-1.12.4/LICENSE.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/jquery-1.12.4/LICENSE.txt -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/jquery-1.12.4/jquery.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/jquery-1.12.4/jquery.min.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/jszip-1.10.20/jszip.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/jszip-1.10.20/jszip.min.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/nouislider-7.0.10/jquery.nouislider.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/nouislider-7.0.10/jquery.nouislider.min.css -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/nouislider-7.0.10/jquery.nouislider.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/nouislider-7.0.10/jquery.nouislider.min.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/selectize-0.12.0/selectize.bootstrap3.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/selectize-0.12.0/selectize.bootstrap3.css -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/selectize-0.12.0/selectize.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_analysis_files/selectize-0.12.0/selectize.min.js -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_preprocess.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_preprocess.html -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_preprocess_files/anchor-sections-1.0/anchor-sections.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_preprocess_files/anchor-sections-1.0/anchor-sections.css -------------------------------------------------------------------------------- /docs/articles/Tabular_Muris_mouse_single-cell_preprocess_files/anchor-sections-1.0/anchor-sections.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Tabular_Muris_mouse_single-cell_preprocess_files/anchor-sections-1.0/anchor-sections.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis.html -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/anchor-sections-1.0/anchor-sections.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/anchor-sections-1.0/anchor-sections.css -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/anchor-sections-1.0/anchor-sections.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/anchor-sections-1.0/anchor-sections.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/css/crosstalk.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/css/crosstalk.css -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.js.map -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js.map: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/crosstalk-1.1.0.1/js/crosstalk.min.js.map -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/datatables-binding-0.16/datatables.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/datatables-binding-0.16/datatables.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/datatables-css-0.0.0/datatables-crosstalk.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/datatables-css-0.0.0/datatables-crosstalk.css -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-core-1.10.20/css/jquery.dataTables.extra.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-core-1.10.20/css/jquery.dataTables.extra.css -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-core-1.10.20/css/jquery.dataTables.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-core-1.10.20/css/jquery.dataTables.min.css -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-core-1.10.20/js/jquery.dataTables.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-core-1.10.20/js/jquery.dataTables.min.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/css/buttons.dataTables.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/css/buttons.dataTables.min.css -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.colVis.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.colVis.min.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.flash.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.flash.min.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.html5.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.html5.min.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.print.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/buttons.print.min.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/dataTables.buttons.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/dt-ext-buttons-1.10.20/js/dataTables.buttons.min.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-33-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-33-1.png -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-36-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-36-1.png -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-39-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/figure-html/unnamed-chunk-39-1.png -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/htmlwidgets-1.5.2/htmlwidgets.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/htmlwidgets-1.5.2/htmlwidgets.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/jquery-1.12.4/LICENSE.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/jquery-1.12.4/LICENSE.txt -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/jquery-1.12.4/jquery.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/jquery-1.12.4/jquery.min.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/jszip-1.10.20/jszip.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/jszip-1.10.20/jszip.min.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/nouislider-7.0.10/jquery.nouislider.min.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/nouislider-7.0.10/jquery.nouislider.min.css -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/nouislider-7.0.10/jquery.nouislider.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/nouislider-7.0.10/jquery.nouislider.min.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/selectize-0.12.0/selectize.bootstrap3.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/selectize-0.12.0/selectize.bootstrap3.css -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_analysis_files/selectize-0.12.0/selectize.min.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_analysis_files/selectize-0.12.0/selectize.min.js -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_preprocess.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_preprocess.html -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_preprocess_files/anchor-sections-1.0/anchor-sections.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_preprocess_files/anchor-sections-1.0/anchor-sections.css -------------------------------------------------------------------------------- /docs/articles/Wuidart_mouse_single-cell_preprocess_files/anchor-sections-1.0/anchor-sections.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/Wuidart_mouse_single-cell_preprocess_files/anchor-sections-1.0/anchor-sections.js -------------------------------------------------------------------------------- /docs/articles/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/articles/index.html -------------------------------------------------------------------------------- /docs/authors.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/authors.html -------------------------------------------------------------------------------- /docs/bootstrap-toc.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/bootstrap-toc.css -------------------------------------------------------------------------------- /docs/bootstrap-toc.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/bootstrap-toc.js -------------------------------------------------------------------------------- /docs/docsearch.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/docsearch.css -------------------------------------------------------------------------------- /docs/docsearch.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/docsearch.js -------------------------------------------------------------------------------- /docs/docsearch.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/docsearch.json -------------------------------------------------------------------------------- /docs/favicon-16x16.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/favicon-16x16.png -------------------------------------------------------------------------------- /docs/favicon-32x32.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/favicon-32x32.png -------------------------------------------------------------------------------- /docs/favicon.ico: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/favicon.ico -------------------------------------------------------------------------------- /docs/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/index.html -------------------------------------------------------------------------------- /docs/link.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/link.svg -------------------------------------------------------------------------------- /docs/logo.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/logo.svg -------------------------------------------------------------------------------- /docs/news/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/news/index.html -------------------------------------------------------------------------------- /docs/pkgdown.css: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/pkgdown.css -------------------------------------------------------------------------------- /docs/pkgdown.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/pkgdown.js -------------------------------------------------------------------------------- /docs/pkgdown.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/pkgdown.yml -------------------------------------------------------------------------------- /docs/reference/Rplot001.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/Rplot001.png -------------------------------------------------------------------------------- /docs/reference/check_unique_by_partition.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/check_unique_by_partition.html -------------------------------------------------------------------------------- /docs/reference/combine_to_matrix.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/combine_to_matrix.html -------------------------------------------------------------------------------- /docs/reference/create_dtu_table.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/create_dtu_table.html -------------------------------------------------------------------------------- /docs/reference/dataframe_to_partitioning.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/dataframe_to_partitioning.html -------------------------------------------------------------------------------- /docs/reference/dturtle_logo.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/dturtle_logo.html -------------------------------------------------------------------------------- /docs/reference/figures/DTUrtle_workflow.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/figures/DTUrtle_workflow.svg -------------------------------------------------------------------------------- /docs/reference/figures/lifecycle-archived.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/figures/lifecycle-archived.svg -------------------------------------------------------------------------------- /docs/reference/figures/lifecycle-defunct.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/figures/lifecycle-defunct.svg -------------------------------------------------------------------------------- /docs/reference/figures/lifecycle-deprecated.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/figures/lifecycle-deprecated.svg -------------------------------------------------------------------------------- /docs/reference/figures/lifecycle-experimental.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/figures/lifecycle-experimental.svg -------------------------------------------------------------------------------- /docs/reference/figures/lifecycle-maturing.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/figures/lifecycle-maturing.svg -------------------------------------------------------------------------------- /docs/reference/figures/lifecycle-questioning.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/figures/lifecycle-questioning.svg -------------------------------------------------------------------------------- /docs/reference/figures/lifecycle-soft-deprecated.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/figures/lifecycle-soft-deprecated.svg -------------------------------------------------------------------------------- /docs/reference/figures/lifecycle-stable.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/figures/lifecycle-stable.svg -------------------------------------------------------------------------------- /docs/reference/figures/lifecycle-superseded.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/figures/lifecycle-superseded.svg -------------------------------------------------------------------------------- /docs/reference/figures/logo.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/figures/logo.svg -------------------------------------------------------------------------------- /docs/reference/filter_messages.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/filter_messages.html -------------------------------------------------------------------------------- /docs/reference/get_by_partition.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/get_by_partition.html -------------------------------------------------------------------------------- /docs/reference/get_diff.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/get_diff.html -------------------------------------------------------------------------------- /docs/reference/get_html_header.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/get_html_header.html -------------------------------------------------------------------------------- /docs/reference/get_proportion_matrix.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/get_proportion_matrix.html -------------------------------------------------------------------------------- /docs/reference/getmax.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/getmax.html -------------------------------------------------------------------------------- /docs/reference/granges_reduce_introns.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/granges_reduce_introns.html -------------------------------------------------------------------------------- /docs/reference/import_counts.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/import_counts.html -------------------------------------------------------------------------------- /docs/reference/import_dge_counts.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/import_dge_counts.html -------------------------------------------------------------------------------- /docs/reference/import_gtf.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/import_gtf.html -------------------------------------------------------------------------------- /docs/reference/index.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/index.html -------------------------------------------------------------------------------- /docs/reference/merge_sparse.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/merge_sparse.html -------------------------------------------------------------------------------- /docs/reference/move_columns_to_front.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/move_columns_to_front.html -------------------------------------------------------------------------------- /docs/reference/no_na.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/no_na.html -------------------------------------------------------------------------------- /docs/reference/one_to_one_mapping.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/one_to_one_mapping.html -------------------------------------------------------------------------------- /docs/reference/partitioning_to_dataframe.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/partitioning_to_dataframe.html -------------------------------------------------------------------------------- /docs/reference/plot_dimensional_reduction.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/plot_dimensional_reduction.html -------------------------------------------------------------------------------- /docs/reference/plot_dtu_table.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/plot_dtu_table.html -------------------------------------------------------------------------------- /docs/reference/plot_proportion_barplot.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/plot_proportion_barplot.html -------------------------------------------------------------------------------- /docs/reference/plot_proportion_pheatmap.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/plot_proportion_pheatmap.html -------------------------------------------------------------------------------- /docs/reference/plot_transcripts_view.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/plot_transcripts_view.html -------------------------------------------------------------------------------- /docs/reference/posthoc_and_stager.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/posthoc_and_stager.html -------------------------------------------------------------------------------- /docs/reference/priming_bias_detection_probability.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/priming_bias_detection_probability.html -------------------------------------------------------------------------------- /docs/reference/prop_matrix.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/prop_matrix.html -------------------------------------------------------------------------------- /docs/reference/ratio_expression_in.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/ratio_expression_in.html -------------------------------------------------------------------------------- /docs/reference/readin_bustools.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/readin_bustools.html -------------------------------------------------------------------------------- /docs/reference/rm_version.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/rm_version.html -------------------------------------------------------------------------------- /docs/reference/run_deseq2.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/run_deseq2.html -------------------------------------------------------------------------------- /docs/reference/run_drimseq.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/run_drimseq.html -------------------------------------------------------------------------------- /docs/reference/run_posthoc.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/run_posthoc.html -------------------------------------------------------------------------------- /docs/reference/seurat_add_tx2gene.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/seurat_add_tx2gene.html -------------------------------------------------------------------------------- /docs/reference/smallProportionSD.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/smallProportionSD.html -------------------------------------------------------------------------------- /docs/reference/sparse_division.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/sparse_division.html -------------------------------------------------------------------------------- /docs/reference/sparse_filter.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/sparse_filter.html -------------------------------------------------------------------------------- /docs/reference/summarize_to_gene.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/summarize_to_gene.html -------------------------------------------------------------------------------- /docs/reference/table_percentage_bar.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/table_percentage_bar.html -------------------------------------------------------------------------------- /docs/reference/table_pval_tile.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/reference/table_pval_tile.html -------------------------------------------------------------------------------- /docs/sitemap.xml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/docs/sitemap.xml -------------------------------------------------------------------------------- /inst/CITATION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/inst/CITATION -------------------------------------------------------------------------------- /inst/logo/logo.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/inst/logo/logo.svg -------------------------------------------------------------------------------- /man/check_unique_by_partition.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/check_unique_by_partition.Rd -------------------------------------------------------------------------------- /man/combine_to_matrix.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/combine_to_matrix.Rd -------------------------------------------------------------------------------- /man/create_dtu_table.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/create_dtu_table.Rd -------------------------------------------------------------------------------- /man/dataframe_to_partitioning.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/dataframe_to_partitioning.Rd -------------------------------------------------------------------------------- /man/dturtle_logo.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/dturtle_logo.Rd -------------------------------------------------------------------------------- /man/figures/DTUrtle_workflow.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/figures/DTUrtle_workflow.svg -------------------------------------------------------------------------------- /man/figures/lifecycle-archived.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/figures/lifecycle-archived.svg -------------------------------------------------------------------------------- /man/figures/lifecycle-defunct.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/figures/lifecycle-defunct.svg -------------------------------------------------------------------------------- /man/figures/lifecycle-deprecated.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/figures/lifecycle-deprecated.svg -------------------------------------------------------------------------------- /man/figures/lifecycle-experimental.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/figures/lifecycle-experimental.svg -------------------------------------------------------------------------------- /man/figures/lifecycle-maturing.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/figures/lifecycle-maturing.svg -------------------------------------------------------------------------------- /man/figures/lifecycle-questioning.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/figures/lifecycle-questioning.svg -------------------------------------------------------------------------------- /man/figures/lifecycle-soft-deprecated.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/figures/lifecycle-soft-deprecated.svg -------------------------------------------------------------------------------- /man/figures/lifecycle-stable.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/figures/lifecycle-stable.svg -------------------------------------------------------------------------------- /man/figures/lifecycle-superseded.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/figures/lifecycle-superseded.svg -------------------------------------------------------------------------------- /man/figures/logo.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/figures/logo.svg -------------------------------------------------------------------------------- /man/filter_messages.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/filter_messages.Rd -------------------------------------------------------------------------------- /man/get_by_partition.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/get_by_partition.Rd -------------------------------------------------------------------------------- /man/get_diff.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/get_diff.Rd -------------------------------------------------------------------------------- /man/get_html_header.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/get_html_header.Rd -------------------------------------------------------------------------------- /man/get_proportion_matrix.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/get_proportion_matrix.Rd -------------------------------------------------------------------------------- /man/getmax.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/getmax.Rd -------------------------------------------------------------------------------- /man/granges_reduce_introns.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/granges_reduce_introns.Rd -------------------------------------------------------------------------------- /man/import_counts.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/import_counts.Rd -------------------------------------------------------------------------------- /man/import_dge_counts.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/import_dge_counts.Rd -------------------------------------------------------------------------------- /man/import_gtf.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/import_gtf.Rd -------------------------------------------------------------------------------- /man/merge_sparse.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/merge_sparse.Rd -------------------------------------------------------------------------------- /man/move_columns_to_front.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/move_columns_to_front.Rd -------------------------------------------------------------------------------- /man/no_na.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/no_na.Rd -------------------------------------------------------------------------------- /man/one_to_one_mapping.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/one_to_one_mapping.Rd -------------------------------------------------------------------------------- /man/partitioning_to_dataframe.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/partitioning_to_dataframe.Rd -------------------------------------------------------------------------------- /man/plot_dimensional_reduction.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/plot_dimensional_reduction.Rd -------------------------------------------------------------------------------- /man/plot_dtu_table.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/plot_dtu_table.Rd -------------------------------------------------------------------------------- /man/plot_proportion_barplot.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/plot_proportion_barplot.Rd -------------------------------------------------------------------------------- /man/plot_proportion_pheatmap.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/plot_proportion_pheatmap.Rd -------------------------------------------------------------------------------- /man/plot_transcripts_view.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/plot_transcripts_view.Rd -------------------------------------------------------------------------------- /man/posthoc_and_stager.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/posthoc_and_stager.Rd -------------------------------------------------------------------------------- /man/priming_bias_detection_probability.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/priming_bias_detection_probability.Rd -------------------------------------------------------------------------------- /man/prop_matrix.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/prop_matrix.Rd -------------------------------------------------------------------------------- /man/ratio_expression_in.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/ratio_expression_in.Rd -------------------------------------------------------------------------------- /man/readin_bustools.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/readin_bustools.Rd -------------------------------------------------------------------------------- /man/rm_version.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/rm_version.Rd -------------------------------------------------------------------------------- /man/run_deseq2.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/run_deseq2.Rd -------------------------------------------------------------------------------- /man/run_drimseq.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/run_drimseq.Rd -------------------------------------------------------------------------------- /man/run_posthoc.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/run_posthoc.Rd -------------------------------------------------------------------------------- /man/seurat_add_tx2gene.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/seurat_add_tx2gene.Rd -------------------------------------------------------------------------------- /man/smallProportionSD.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/smallProportionSD.Rd -------------------------------------------------------------------------------- /man/sparse_filter.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/sparse_filter.Rd -------------------------------------------------------------------------------- /man/summarize_to_gene.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/summarize_to_gene.Rd -------------------------------------------------------------------------------- /man/table_percentage_bar.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/table_percentage_bar.Rd -------------------------------------------------------------------------------- /man/table_pval_tile.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/man/table_pval_tile.Rd -------------------------------------------------------------------------------- /pkgdown/_pkgdown.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/pkgdown/_pkgdown.yml -------------------------------------------------------------------------------- /pkgdown/favicon/apple-touch-icon-120x120.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/pkgdown/favicon/apple-touch-icon-120x120.png -------------------------------------------------------------------------------- /pkgdown/favicon/apple-touch-icon-152x152.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/pkgdown/favicon/apple-touch-icon-152x152.png -------------------------------------------------------------------------------- /pkgdown/favicon/apple-touch-icon-180x180.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/pkgdown/favicon/apple-touch-icon-180x180.png -------------------------------------------------------------------------------- /pkgdown/favicon/apple-touch-icon-60x60.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/pkgdown/favicon/apple-touch-icon-60x60.png -------------------------------------------------------------------------------- /pkgdown/favicon/apple-touch-icon-76x76.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/pkgdown/favicon/apple-touch-icon-76x76.png -------------------------------------------------------------------------------- /pkgdown/favicon/apple-touch-icon.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/pkgdown/favicon/apple-touch-icon.png -------------------------------------------------------------------------------- /pkgdown/favicon/favicon-16x16.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/pkgdown/favicon/favicon-16x16.png -------------------------------------------------------------------------------- /pkgdown/favicon/favicon-32x32.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/pkgdown/favicon/favicon-32x32.png -------------------------------------------------------------------------------- /pkgdown/favicon/favicon.ico: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/pkgdown/favicon/favicon.ico -------------------------------------------------------------------------------- /vignettes/Hoffman_human_bulk_analysis.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/vignettes/Hoffman_human_bulk_analysis.Rmd -------------------------------------------------------------------------------- /vignettes/Hoffman_human_bulk_preprocess.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/vignettes/Hoffman_human_bulk_preprocess.Rmd -------------------------------------------------------------------------------- /vignettes/Hoffman_human_single-cell_analysis.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/vignettes/Hoffman_human_single-cell_analysis.Rmd -------------------------------------------------------------------------------- /vignettes/Hoffman_human_single-cell_preprocess.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/vignettes/Hoffman_human_single-cell_preprocess.Rmd -------------------------------------------------------------------------------- /vignettes/Tabular_Muris_mouse_single-cell_analysis.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/vignettes/Tabular_Muris_mouse_single-cell_analysis.Rmd -------------------------------------------------------------------------------- /vignettes/Tabular_Muris_mouse_single-cell_preprocess.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/vignettes/Tabular_Muris_mouse_single-cell_preprocess.Rmd -------------------------------------------------------------------------------- /vignettes/Wuidart_mouse_single-cell_analysis.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/vignettes/Wuidart_mouse_single-cell_analysis.Rmd -------------------------------------------------------------------------------- /vignettes/Wuidart_mouse_single-cell_preprocess.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TobiTekath/DTUrtle/HEAD/vignettes/Wuidart_mouse_single-cell_preprocess.Rmd --------------------------------------------------------------------------------