├── .gitignore ├── Images ├── Eunicella_geneflow.png ├── PCA_by_population.png └── PCA_by_region.png ├── README.md ├── TJ_genind2genepop_function.R ├── TJ_genind2structure_function.R ├── calculate_marine_lc_distances.R ├── gene_flow_diagrams.R ├── repeat_dapc_using_Thia2022_nPC_method.R └── visualise_dapc_pca.R /.gitignore: -------------------------------------------------------------------------------- 1 | .Rhistory 2 | -------------------------------------------------------------------------------- /Images/Eunicella_geneflow.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Tom-Jenkins/utility_scripts/HEAD/Images/Eunicella_geneflow.png -------------------------------------------------------------------------------- /Images/PCA_by_population.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Tom-Jenkins/utility_scripts/HEAD/Images/PCA_by_population.png -------------------------------------------------------------------------------- /Images/PCA_by_region.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Tom-Jenkins/utility_scripts/HEAD/Images/PCA_by_region.png -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Tom-Jenkins/utility_scripts/HEAD/README.md -------------------------------------------------------------------------------- /TJ_genind2genepop_function.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Tom-Jenkins/utility_scripts/HEAD/TJ_genind2genepop_function.R -------------------------------------------------------------------------------- /TJ_genind2structure_function.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Tom-Jenkins/utility_scripts/HEAD/TJ_genind2structure_function.R -------------------------------------------------------------------------------- /calculate_marine_lc_distances.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Tom-Jenkins/utility_scripts/HEAD/calculate_marine_lc_distances.R -------------------------------------------------------------------------------- /gene_flow_diagrams.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Tom-Jenkins/utility_scripts/HEAD/gene_flow_diagrams.R -------------------------------------------------------------------------------- /repeat_dapc_using_Thia2022_nPC_method.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Tom-Jenkins/utility_scripts/HEAD/repeat_dapc_using_Thia2022_nPC_method.R -------------------------------------------------------------------------------- /visualise_dapc_pca.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Tom-Jenkins/utility_scripts/HEAD/visualise_dapc_pca.R --------------------------------------------------------------------------------