├── .github └── workflows │ └── publish-to-test-pypi.yml ├── CHANGELOG.md ├── LICENSE ├── MLSB2020.png ├── README.md ├── bin ├── caretta-app ├── caretta-app-demo └── caretta-cli ├── caretta ├── __init__.py ├── app │ ├── __init__.py │ ├── app_callbacks.py │ ├── app_helper.py │ └── app_layout.py ├── dynamic_time_warping.py ├── feature_extraction.py ├── helper.py ├── multiple_alignment.py ├── neighbor_joining.py ├── score_functions.py └── superposition_functions.py ├── caretta_logo.png ├── hmmer_pdb_all.txt ├── pyproject.toml ├── setup.cfg ├── setup.py └── test_data ├── 1kdu.pdb ├── 1pk4.pdb └── 1pkr.pdb /.github/workflows/publish-to-test-pypi.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/TurtleTools/caretta/HEAD/.github/workflows/publish-to-test-pypi.yml -------------------------------------------------------------------------------- /CHANGELOG.md: 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