├── .gitignore ├── LICENSE ├── README.md ├── analysis ├── README.md ├── analyze_pass_rate.ipynb ├── analyze_pass_rate.py ├── analyze_pass_rate_v2.ipynb ├── analyze_pass_rate_v2.py ├── parse_results-v2.ipynb ├── parse_results.ipynb ├── plot_metrics_n.ipynb ├── plot_pass_n.ipynb ├── radar.ipynb ├── regrade_eval_results.py └── result_viewer.py ├── assets ├── MMMU-medical.png ├── MedXpertQA-MM.jpg ├── pathvqa_closed.jpg ├── pmc_vqa.jpg ├── slake_closed.jpg └── vqa_rad_closed.jpg ├── data_process ├── eval_data_exploration.ipynb ├── eval_data_stats.ipynb ├── explore_hf_images.ipynb ├── extract_options.py ├── hf_dataset_viewer.py ├── prepare_vlm_eval_data.py ├── prepare_vlm_eval_data_v2.py └── train_dataset │ ├── __init__.py │ ├── assign_pass_count.py │ ├── check_pass_rate_dataset.py │ ├── convert_trl_format.py │ ├── convert_trl_format_for_vlm.py │ ├── convert_verl_format.py │ ├── explore_format_of_openthoughts.py │ ├── merge_pmc_vqa_cot.py │ ├── order_easy_to_hard.py │ ├── pmc_vqa-gpt_4o_cot.sh │ ├── prepare_pmc_vqa.py │ ├── resize_image.py │ ├── stat_token_len.py │ └── upload_local_dataset.py ├── docs ├── aws │ └── sync.md ├── data.md ├── env.md ├── eval.md └── train.md ├── eval ├── __init__.py ├── convert_ckpt.sh ├── estimate_pass_rate.sh ├── eval_baselines.sh ├── eval_commands.sh ├── gather_stats.py ├── legacy │ ├── run_inference.py │ ├── run_inference_by_batch.py │ └── run_inference_parallel.py ├── merge_results.py ├── run_api_inference.py ├── run_api_inference_single.py ├── run_offline_inference.py └── run_offline_inference_v2.py ├── scripts ├── legacy │ ├── convert_pmc_vqa_easyr1_to_verl.py │ ├── convert_pmc_vqa_to_easyr1.py │ ├── convert_pmc_vqa_to_easyr1_fault_tolerance.py │ ├── eda_omnimedvqa.ipynb │ ├── eda_pmc_vqa.ipynb │ ├── fix_key_in_omnimedvqa.py │ ├── resize_filter_pmc_vqa_easyr1.py │ ├── stat_filter_verl.py │ ├── stats_tokens.ipynb │ └── stats_tokens_pmc_vqa.ipynb └── upload_weights │ ├── README_datasets.md │ ├── gather_weights.sh │ ├── requirements_datasets.txt │ ├── upload_datasets.py │ └── upload_weights.py └── train ├── my_reward.py ├── rl+rl-3b.sh ├── rl+rl-7b.sh ├── sft+rl-3b.sh ├── sft+rl-7b.sh ├── sft ├── convert_weights.py ├── fsdp_config_qwen.json ├── fsdp_config_qwen_cpu.json ├── sft.py ├── sft_local.sh ├── sft_vlm.py ├── sft_vlm_local.sh └── train_commands.sh ├── train-qwen2_5_vl_32b-m23k.sh ├── train-qwen2_5_vl_3b-m23k-easy_to_hard-1_epoch.sh ├── train-qwen2_5_vl_3b-m23k-easy_to_hard.sh ├── train-qwen2_5_vl_3b-m23k.sh ├── train-qwen2_5_vl_3b-pmc_vqa-easy_to_hard.sh ├── train-qwen2_5_vl_3b-pmc_vqa.sh ├── train-qwen2_5_vl_7b-m23k-easy_to_hard-1_epoch.sh ├── train-qwen2_5_vl_7b-m23k-easy_to_hard.sh ├── train-qwen2_5_vl_7b-m23k.sh ├── train-qwen2_5_vl_7b-pmc_vqa-easy_to_hard.sh └── train-qwen2_5_vl_7b-pmc_vqa.sh /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/README.md -------------------------------------------------------------------------------- /analysis/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/analysis/README.md -------------------------------------------------------------------------------- /analysis/analyze_pass_rate.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/analysis/analyze_pass_rate.ipynb -------------------------------------------------------------------------------- /analysis/analyze_pass_rate.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/analysis/analyze_pass_rate.py -------------------------------------------------------------------------------- /analysis/analyze_pass_rate_v2.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/analysis/analyze_pass_rate_v2.ipynb -------------------------------------------------------------------------------- /analysis/analyze_pass_rate_v2.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/analysis/analyze_pass_rate_v2.py -------------------------------------------------------------------------------- /analysis/parse_results-v2.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/analysis/parse_results-v2.ipynb -------------------------------------------------------------------------------- /analysis/parse_results.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/analysis/parse_results.ipynb -------------------------------------------------------------------------------- /analysis/plot_metrics_n.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/analysis/plot_metrics_n.ipynb -------------------------------------------------------------------------------- /analysis/plot_pass_n.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/analysis/plot_pass_n.ipynb -------------------------------------------------------------------------------- /analysis/radar.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/analysis/radar.ipynb -------------------------------------------------------------------------------- /analysis/regrade_eval_results.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/analysis/regrade_eval_results.py -------------------------------------------------------------------------------- /analysis/result_viewer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/analysis/result_viewer.py -------------------------------------------------------------------------------- /assets/MMMU-medical.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/assets/MMMU-medical.png -------------------------------------------------------------------------------- /assets/MedXpertQA-MM.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/assets/MedXpertQA-MM.jpg -------------------------------------------------------------------------------- /assets/pathvqa_closed.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/assets/pathvqa_closed.jpg -------------------------------------------------------------------------------- /assets/pmc_vqa.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/assets/pmc_vqa.jpg -------------------------------------------------------------------------------- /assets/slake_closed.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/assets/slake_closed.jpg -------------------------------------------------------------------------------- /assets/vqa_rad_closed.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/assets/vqa_rad_closed.jpg -------------------------------------------------------------------------------- /data_process/eval_data_exploration.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/eval_data_exploration.ipynb -------------------------------------------------------------------------------- /data_process/eval_data_stats.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/eval_data_stats.ipynb -------------------------------------------------------------------------------- /data_process/explore_hf_images.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/explore_hf_images.ipynb -------------------------------------------------------------------------------- /data_process/extract_options.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/extract_options.py -------------------------------------------------------------------------------- /data_process/hf_dataset_viewer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/hf_dataset_viewer.py -------------------------------------------------------------------------------- /data_process/prepare_vlm_eval_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/prepare_vlm_eval_data.py -------------------------------------------------------------------------------- /data_process/prepare_vlm_eval_data_v2.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/prepare_vlm_eval_data_v2.py -------------------------------------------------------------------------------- /data_process/train_dataset/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /data_process/train_dataset/assign_pass_count.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/train_dataset/assign_pass_count.py -------------------------------------------------------------------------------- /data_process/train_dataset/check_pass_rate_dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/train_dataset/check_pass_rate_dataset.py -------------------------------------------------------------------------------- /data_process/train_dataset/convert_trl_format.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/train_dataset/convert_trl_format.py -------------------------------------------------------------------------------- /data_process/train_dataset/convert_trl_format_for_vlm.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/train_dataset/convert_trl_format_for_vlm.py -------------------------------------------------------------------------------- /data_process/train_dataset/convert_verl_format.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/train_dataset/convert_verl_format.py -------------------------------------------------------------------------------- /data_process/train_dataset/explore_format_of_openthoughts.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/train_dataset/explore_format_of_openthoughts.py -------------------------------------------------------------------------------- /data_process/train_dataset/merge_pmc_vqa_cot.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/train_dataset/merge_pmc_vqa_cot.py -------------------------------------------------------------------------------- /data_process/train_dataset/order_easy_to_hard.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/train_dataset/order_easy_to_hard.py -------------------------------------------------------------------------------- /data_process/train_dataset/pmc_vqa-gpt_4o_cot.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/train_dataset/pmc_vqa-gpt_4o_cot.sh -------------------------------------------------------------------------------- /data_process/train_dataset/prepare_pmc_vqa.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/train_dataset/prepare_pmc_vqa.py -------------------------------------------------------------------------------- /data_process/train_dataset/resize_image.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/train_dataset/resize_image.py -------------------------------------------------------------------------------- /data_process/train_dataset/stat_token_len.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/train_dataset/stat_token_len.py -------------------------------------------------------------------------------- /data_process/train_dataset/upload_local_dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/data_process/train_dataset/upload_local_dataset.py -------------------------------------------------------------------------------- /docs/aws/sync.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/docs/aws/sync.md -------------------------------------------------------------------------------- /docs/data.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/docs/data.md -------------------------------------------------------------------------------- /docs/env.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/docs/env.md -------------------------------------------------------------------------------- /docs/eval.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/docs/eval.md -------------------------------------------------------------------------------- /docs/train.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/docs/train.md -------------------------------------------------------------------------------- /eval/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /eval/convert_ckpt.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/eval/convert_ckpt.sh -------------------------------------------------------------------------------- /eval/estimate_pass_rate.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/eval/estimate_pass_rate.sh -------------------------------------------------------------------------------- /eval/eval_baselines.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/eval/eval_baselines.sh -------------------------------------------------------------------------------- /eval/eval_commands.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/eval/eval_commands.sh -------------------------------------------------------------------------------- /eval/gather_stats.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/eval/gather_stats.py -------------------------------------------------------------------------------- /eval/legacy/run_inference.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/eval/legacy/run_inference.py -------------------------------------------------------------------------------- /eval/legacy/run_inference_by_batch.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/eval/legacy/run_inference_by_batch.py -------------------------------------------------------------------------------- /eval/legacy/run_inference_parallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/eval/legacy/run_inference_parallel.py -------------------------------------------------------------------------------- /eval/merge_results.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/eval/merge_results.py -------------------------------------------------------------------------------- /eval/run_api_inference.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/eval/run_api_inference.py -------------------------------------------------------------------------------- /eval/run_api_inference_single.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/eval/run_api_inference_single.py -------------------------------------------------------------------------------- /eval/run_offline_inference.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/eval/run_offline_inference.py -------------------------------------------------------------------------------- /eval/run_offline_inference_v2.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/eval/run_offline_inference_v2.py -------------------------------------------------------------------------------- /scripts/legacy/convert_pmc_vqa_easyr1_to_verl.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/legacy/convert_pmc_vqa_easyr1_to_verl.py -------------------------------------------------------------------------------- /scripts/legacy/convert_pmc_vqa_to_easyr1.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/legacy/convert_pmc_vqa_to_easyr1.py -------------------------------------------------------------------------------- /scripts/legacy/convert_pmc_vqa_to_easyr1_fault_tolerance.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/legacy/convert_pmc_vqa_to_easyr1_fault_tolerance.py -------------------------------------------------------------------------------- /scripts/legacy/eda_omnimedvqa.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/legacy/eda_omnimedvqa.ipynb -------------------------------------------------------------------------------- /scripts/legacy/eda_pmc_vqa.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/legacy/eda_pmc_vqa.ipynb -------------------------------------------------------------------------------- /scripts/legacy/fix_key_in_omnimedvqa.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/legacy/fix_key_in_omnimedvqa.py -------------------------------------------------------------------------------- /scripts/legacy/resize_filter_pmc_vqa_easyr1.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/legacy/resize_filter_pmc_vqa_easyr1.py -------------------------------------------------------------------------------- /scripts/legacy/stat_filter_verl.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/legacy/stat_filter_verl.py -------------------------------------------------------------------------------- /scripts/legacy/stats_tokens.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/legacy/stats_tokens.ipynb -------------------------------------------------------------------------------- /scripts/legacy/stats_tokens_pmc_vqa.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/legacy/stats_tokens_pmc_vqa.ipynb -------------------------------------------------------------------------------- /scripts/upload_weights/README_datasets.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/upload_weights/README_datasets.md -------------------------------------------------------------------------------- /scripts/upload_weights/gather_weights.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/upload_weights/gather_weights.sh -------------------------------------------------------------------------------- /scripts/upload_weights/requirements_datasets.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/upload_weights/requirements_datasets.txt -------------------------------------------------------------------------------- /scripts/upload_weights/upload_datasets.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/upload_weights/upload_datasets.py -------------------------------------------------------------------------------- /scripts/upload_weights/upload_weights.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/scripts/upload_weights/upload_weights.py -------------------------------------------------------------------------------- /train/my_reward.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/my_reward.py -------------------------------------------------------------------------------- /train/rl+rl-3b.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/rl+rl-3b.sh -------------------------------------------------------------------------------- /train/rl+rl-7b.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/rl+rl-7b.sh -------------------------------------------------------------------------------- /train/sft+rl-3b.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/sft+rl-3b.sh -------------------------------------------------------------------------------- /train/sft+rl-7b.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/sft+rl-7b.sh -------------------------------------------------------------------------------- /train/sft/convert_weights.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/sft/convert_weights.py -------------------------------------------------------------------------------- /train/sft/fsdp_config_qwen.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/sft/fsdp_config_qwen.json -------------------------------------------------------------------------------- /train/sft/fsdp_config_qwen_cpu.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/sft/fsdp_config_qwen_cpu.json -------------------------------------------------------------------------------- /train/sft/sft.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/sft/sft.py -------------------------------------------------------------------------------- /train/sft/sft_local.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/sft/sft_local.sh -------------------------------------------------------------------------------- /train/sft/sft_vlm.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/sft/sft_vlm.py -------------------------------------------------------------------------------- /train/sft/sft_vlm_local.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/sft/sft_vlm_local.sh -------------------------------------------------------------------------------- /train/sft/train_commands.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/sft/train_commands.sh -------------------------------------------------------------------------------- /train/train-qwen2_5_vl_32b-m23k.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/train-qwen2_5_vl_32b-m23k.sh -------------------------------------------------------------------------------- /train/train-qwen2_5_vl_3b-m23k-easy_to_hard-1_epoch.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/train-qwen2_5_vl_3b-m23k-easy_to_hard-1_epoch.sh -------------------------------------------------------------------------------- /train/train-qwen2_5_vl_3b-m23k-easy_to_hard.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/train-qwen2_5_vl_3b-m23k-easy_to_hard.sh -------------------------------------------------------------------------------- /train/train-qwen2_5_vl_3b-m23k.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/train-qwen2_5_vl_3b-m23k.sh -------------------------------------------------------------------------------- /train/train-qwen2_5_vl_3b-pmc_vqa-easy_to_hard.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/train-qwen2_5_vl_3b-pmc_vqa-easy_to_hard.sh -------------------------------------------------------------------------------- /train/train-qwen2_5_vl_3b-pmc_vqa.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/train-qwen2_5_vl_3b-pmc_vqa.sh -------------------------------------------------------------------------------- /train/train-qwen2_5_vl_7b-m23k-easy_to_hard-1_epoch.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/train-qwen2_5_vl_7b-m23k-easy_to_hard-1_epoch.sh -------------------------------------------------------------------------------- /train/train-qwen2_5_vl_7b-m23k-easy_to_hard.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/train-qwen2_5_vl_7b-m23k-easy_to_hard.sh -------------------------------------------------------------------------------- /train/train-qwen2_5_vl_7b-m23k.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/train-qwen2_5_vl_7b-m23k.sh -------------------------------------------------------------------------------- /train/train-qwen2_5_vl_7b-pmc_vqa-easy_to_hard.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/train-qwen2_5_vl_7b-pmc_vqa-easy_to_hard.sh -------------------------------------------------------------------------------- /train/train-qwen2_5_vl_7b-pmc_vqa.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/UCSC-VLAA/MedVLThinker/HEAD/train/train-qwen2_5_vl_7b-pmc_vqa.sh --------------------------------------------------------------------------------