├── .coveragerc ├── .flake8 ├── .github └── workflows │ └── scikit-hubness_ci.yml ├── .gitignore ├── .readthedocs.yml ├── CODE_OF_CONDUCT.md ├── CONTRIBUTING.rst ├── LICENSE.txt ├── MANIFEST.in ├── README.md ├── WARRANTY.txt ├── docs ├── Makefile ├── changelog.md ├── conf.py ├── development │ └── contributing.rst ├── documentation │ ├── ahr.rst │ ├── analysis.rst │ ├── ann.rst │ ├── auto_examples │ │ ├── auto_examples_jupyter.zip │ │ ├── auto_examples_python.zip │ │ ├── images │ │ │ ├── sphx_glr_plot_classification_001.png │ │ │ ├── sphx_glr_plot_classification_002.png │ │ │ ├── sphx_glr_plot_lle_digits_001.png │ │ │ ├── sphx_glr_plot_lle_digits_002.png │ │ │ ├── sphx_glr_plot_lle_digits_003.png │ │ │ ├── sphx_glr_plot_lle_digits_004.png │ │ │ ├── sphx_glr_plot_lle_digits_005.png │ │ │ ├── sphx_glr_plot_lle_digits_006.png │ │ │ ├── sphx_glr_plot_lle_digits_007.png │ │ │ ├── sphx_glr_plot_lle_digits_008.png │ │ │ ├── sphx_glr_plot_lle_digits_009.png │ │ │ ├── sphx_glr_plot_lle_digits_010.png │ │ │ ├── sphx_glr_plot_lle_digits_011.png │ │ │ ├── sphx_glr_plot_lle_digits_012.png │ │ │ ├── sphx_glr_plot_lle_digits_013.png │ │ │ ├── sphx_glr_plot_lle_digits_014.png │ │ │ ├── sphx_glr_plot_lle_digits_015.png │ │ │ ├── sphx_glr_plot_lle_digits_016.png │ │ │ ├── sphx_glr_plot_multioutput_face_completion_001.png │ │ │ ├── sphx_glr_plot_nca_classification_001.png │ │ │ ├── sphx_glr_plot_nca_classification_002.png │ │ │ ├── sphx_glr_plot_nca_classification_003.png │ │ │ ├── sphx_glr_plot_nca_classification_004.png │ │ │ ├── sphx_glr_plot_nca_classification_005.png │ │ │ ├── sphx_glr_plot_nca_classification_006.png │ │ │ ├── sphx_glr_plot_nca_dim_reduction_001.png │ │ │ ├── sphx_glr_plot_nca_dim_reduction_002.png │ │ │ ├── sphx_glr_plot_nca_dim_reduction_003.png │ │ │ ├── sphx_glr_plot_nearest_centroid_001.png │ │ │ ├── sphx_glr_plot_nearest_centroid_002.png │ │ │ ├── sphx_glr_plot_regression_001.png │ │ │ └── thumb │ │ │ │ ├── sphx_glr_plot_classification_thumb.png │ │ │ │ ├── sphx_glr_plot_lle_digits_thumb.png │ │ │ │ ├── sphx_glr_plot_multioutput_face_completion_thumb.png │ │ │ │ ├── sphx_glr_plot_nca_classification_thumb.png │ │ │ │ ├── sphx_glr_plot_nca_dim_reduction_thumb.png │ │ │ │ ├── sphx_glr_plot_nearest_centroid_thumb.png │ │ │ │ └── sphx_glr_plot_regression_thumb.png │ │ ├── index.rst │ │ ├── plot_classification.ipynb │ │ ├── plot_classification.py │ │ ├── plot_classification.py.md5 │ │ ├── plot_classification.rst │ │ ├── plot_lle_digits.ipynb │ │ ├── plot_lle_digits.py │ │ ├── plot_lle_digits.py.md5 │ │ ├── plot_lle_digits.rst │ │ ├── plot_multioutput_face_completion.ipynb │ │ ├── plot_multioutput_face_completion.py │ │ ├── plot_multioutput_face_completion.py.md5 │ │ ├── plot_multioutput_face_completion.rst │ │ ├── plot_nca_classification.ipynb │ │ ├── plot_nca_classification.py │ │ ├── plot_nca_classification.py.md5 │ │ ├── plot_nca_classification.rst │ │ ├── plot_nca_dim_reduction.ipynb │ │ ├── plot_nca_dim_reduction.py │ │ ├── plot_nca_dim_reduction.py.md5 │ │ ├── plot_nca_dim_reduction.rst │ │ ├── plot_nearest_centroid.ipynb │ │ ├── plot_nearest_centroid.py │ │ ├── plot_nearest_centroid.py.md5 │ │ ├── plot_nearest_centroid.rst │ │ ├── plot_regression.ipynb │ │ ├── plot_regression.py │ │ ├── plot_regression.py.md5 │ │ ├── plot_regression.rst │ │ └── sg_execution_times.rst │ ├── auto_examples_ahr │ │ ├── auto_examples_ahr_jupyter.zip │ │ ├── auto_examples_ahr_python.zip │ │ ├── high_dim_gaussian.ipynb │ │ ├── high_dim_gaussian.py │ │ ├── high_dim_gaussian.rst │ │ ├── images │ │ │ └── thumb │ │ │ │ ├── sphx_glr_high_dim_gaussian_thumb.png │ │ │ │ └── sphx_glr_reusing_index_thumb.png │ │ ├── index.rst │ │ ├── reusing_index.ipynb │ │ ├── reusing_index.py │ │ └── reusing_index.rst │ ├── auto_examples_ann │ │ ├── auto_examples_ann_jupyter.zip │ │ ├── auto_examples_ann_python.zip │ │ ├── images │ │ │ └── thumb │ │ │ │ └── sphx_glr_word_embeddings_thumb.png │ │ ├── index.rst │ │ ├── word_embeddings.ipynb │ │ ├── word_embeddings.py │ │ └── word_embeddings.rst │ ├── auto_examples_hr │ │ ├── auto_examples_hr_jupyter.zip │ │ ├── auto_examples_hr_python.zip │ │ ├── images │ │ │ └── thumb │ │ │ │ ├── sphx_glr_olivetti_faces_thumb.png │ │ │ │ └── sphx_glr_pipelines_thumb.png │ │ ├── index.rst │ │ ├── olivetti_faces.ipynb │ │ ├── olivetti_faces.py │ │ ├── olivetti_faces.rst │ │ ├── pipelines.ipynb │ │ ├── pipelines.py │ │ └── pipelines.rst │ ├── concepts.rst │ ├── documentation.rst │ ├── examples.rst │ ├── history.rst │ ├── hr.rst │ ├── nearestneighbors.rst │ ├── reduction.rst │ ├── sklearn.rst │ └── user_guide.rst ├── getting_started │ ├── example.rst │ └── installation.rst ├── github_link.py ├── index.rst └── make.bat ├── examples ├── approximate_hub_red │ ├── README.rst │ ├── high_dim_gaussian.py │ └── reusing_index.py ├── approximate_neighbors │ ├── README.rst │ └── word_embeddings.py ├── hubness_reduction │ ├── README.rst │ ├── olivetti_faces.py │ └── pipelines.py └── sklearn │ ├── README.rst │ ├── plot_classification.py │ ├── plot_lle_digits.py │ ├── plot_multioutput_face_completion.py │ ├── plot_nca_classification.py │ ├── plot_nca_dim_reduction.py │ ├── plot_nearest_centroid.py │ └── plot_regression.py ├── paper ├── arxiv │ └── scikit-hubness_arxiv_v1.pdf └── joss │ ├── paper.bib │ └── paper.md ├── pyproject.toml ├── requirements-rtd.txt ├── requirements-win.txt ├── requirements.txt ├── scripts ├── install-ngt.sh └── install-puffinn.sh ├── setup.cfg └── skhubness ├── __init__.py ├── analysis ├── __init__.py ├── estimation.py └── tests │ ├── __init__.py │ └── test_estimation.py ├── data ├── __init__.py ├── dexter │ ├── ABOUT │ ├── dexter_train.data │ └── dexter_train.labels ├── load_dataset.py └── tests │ ├── __init__.py │ └── test_load_datasets.py ├── neighbors ├── __init__.py ├── _annoy.py ├── _ngt.py ├── _nmslib.py ├── _puffinn.py ├── approximate_neighbors.py └── tests │ ├── __init__.py │ ├── test_annoy.py │ ├── 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