├── .gitignore ├── LICENSE ├── PointSegment ├── .DS_Store ├── RandLANet.py ├── compile_op.sh ├── helper_ply.py ├── helper_tf_util.py ├── helper_tool.py ├── runBraTS.py ├── runPancreas.py ├── testBraTS.py ├── testPancreas.py └── utils │ ├── .DS_Store │ ├── 6_fold_cv.py │ ├── cpp_wrappers │ ├── compile_wrappers.sh │ ├── cpp_subsampling │ │ ├── build │ │ │ ├── temp.linux-x86_64-3.5 │ │ │ │ ├── cpp_wrappers │ │ │ │ │ └── cpp_utils │ │ │ │ │ │ └── cloud │ │ │ │ │ │ └── cloud.o │ │ │ │ ├── grid_subsampling │ │ │ │ │ └── grid_subsampling.o │ │ │ │ └── wrapper.o │ │ │ └── temp.linux-x86_64-3.6 │ │ │ │ ├── cpp_wrappers │ │ │ │ └── cpp_utils │ │ │ │ │ └── cloud │ │ │ │ │ └── cloud.o │ │ │ │ ├── grid_subsampling │ │ │ │ └── grid_subsampling.o │ │ │ │ └── wrapper.o │ │ ├── grid_subsampling.cpython-35m-x86_64-linux-gnu.so │ │ ├── grid_subsampling.cpython-36m-x86_64-linux-gnu.so │ │ ├── grid_subsampling │ │ │ ├── grid_subsampling.cpp │ │ │ └── grid_subsampling.h │ │ ├── setup.py │ │ └── wrapper.cpp │ └── cpp_utils │ │ ├── cloud │ │ ├── cloud.cpp │ │ └── cloud.h │ │ └── nanoflann │ │ └── nanoflann.hpp │ ├── cvt_CT.py │ ├── cvt_CT_down.py │ ├── dataPrepareBraTS.py │ ├── dataPreparePancreas.py │ ├── meta │ ├── anno_paths.txt │ └── class_names.txt │ ├── nearest_neighbors │ ├── KDTreeTableAdaptor.h │ ├── build │ │ ├── lib.linux-x86_64-3.5 │ │ │ └── nearest_neighbors.cpython-35m-x86_64-linux-gnu.so │ │ ├── lib.linux-x86_64-3.6 │ │ │ └── nearest_neighbors.cpython-36m-x86_64-linux-gnu.so │ │ ├── temp.linux-x86_64-3.5 │ │ │ ├── knn.o │ │ │ └── knn_.o │ │ └── temp.linux-x86_64-3.6 │ │ │ ├── knn.o │ │ │ └── knn_.o │ ├── knn.cpp │ ├── knn.pyx │ ├── knn_.cxx │ ├── knn_.h │ ├── lib │ │ └── python │ │ │ ├── KNN_NanoFLANN-0.0.0-py3.5.egg-info │ │ │ ├── KNN_NanoFLANN-0.0.0-py3.6.egg-info │ │ │ ├── nearest_neighbors.cpython-35m-x86_64-linux-gnu.so │ │ │ └── nearest_neighbors.cpython-36m-x86_64-linux-gnu.so │ ├── nanoflann.hpp │ ├── setup.py │ └── test.py │ ├── over_sampling.py │ └── process_tf.py ├── README.md ├── SaliencyAttention ├── attention.py ├── bilinear_upsampling.py ├── config.py ├── custom_ops.py ├── custom_ops_temp.py ├── data_loader.py ├── data_sampler.py ├── eval.py ├── generate_kfold.py ├── model.py ├── preprocess.py ├── train.py ├── utils.py └── visual_truth_pred.py ├── dataset ├── BraTS2018 │ ├── train_BraTS18.txt │ └── valOffline_BraTS18.txt ├── BraTS2019 │ ├── train_BraTS19.txt │ └── valOffline_BraTS19.txt └── BraTS2020 │ ├── train_BraTS20.txt │ └── valOffline_BraTS20.txt ├── environment.yml ├── figure └── flowchart.jpg └── utils ├── evaluationBraTS.py ├── evaluationPancreas.py ├── genBinaryMap.py ├── genSegmentationBraTS.py └── genSegmentationPancreas.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/VinAIResearch/Point-Unet/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: 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