├── .gitignore ├── EEGLABPlugin └── PrepPipeline0.57.0.zip ├── PrepPipeline ├── derived │ ├── copyDummy.m │ ├── highPassAndClean.m │ ├── highPassAndICA.m │ ├── highPassAndICALinux.m │ ├── highPassAndPrepCleanICA.m │ ├── performICA.m │ ├── resampleAndDealias.m │ └── resampleHighPassAndPrepCleanICA.m ├── eegplugin_prepPipeline.m ├── examples │ ├── runESSLevel1ResampleAndDealias.m │ ├── runESSPrepPipeline.m │ ├── runESSResampleAndDealias.m │ ├── runIndividualPrepPipelineReport.m │ ├── runVEPCollectionComparison.m │ ├── runVEPCollectionIssues.m │ ├── runVEPGatherStructures.m │ ├── runVEPHPAndICANew.m │ ├── runVEPHPAndPrepCleanICA.m │ ├── runVEPPrepPipeline.m │ ├── runVEPPrepReport.m │ └── runVEPstatistics.m ├── extracted │ └── extractICA.m ├── interface │ ├── MasterGUI.m │ ├── boundaryGUI.m │ ├── changeType.m │ ├── closeOpenWindows.m │ ├── detrendGUI.m │ ├── displayErrors.m │ ├── globalTrendGUI.m │ ├── highlightErrors.m │ ├── lineNoiseGUI.m │ ├── loadDefaults.m │ ├── postProcessGUI.m │ ├── referenceGUI.m │ ├── reportGUI.m │ └── resampleGUI.m ├── pop_prepPipeline.m ├── prepPipeline.m ├── prepPostProcess.m ├── prepReport.m ├── preplicense.txt ├── publishPrepReport.m ├── reporting │ ├── calculateSpectrum.m │ ├── createCollectionStatistics.m │ ├── extractNoisyStatistics.m │ ├── extractReferenceStatistics.m │ ├── generateIssueReport.m │ ├── getBadFrames.m │ ├── getBadWindows.m │ ├── getCollectionIssues.m │ ├── getCollections.m │ ├── getDataGroups.m │ ├── getErrors.m │ ├── getFieldIfExists.m │ ├── getLabeledList.m │ ├── getListString.m │ ├── getMessageString.m │ ├── getRankSignificance.m │ ├── getReportChannelInformation.m │ ├── getString.m │ ├── getStructureString.m │ ├── helpers │ │ ├── finputcheck.m │ │ └── matsel.m │ ├── plotScalpMap.m │ ├── plotStackedSignals.m │ ├── printBadChannelsByType.m │ ├── printCellList.m │ ├── printLabeledList.m │ ├── printLines.m │ ├── printList.m │ ├── printListCompressed.m │ ├── relativize.m │ ├── reportDetrend.m │ ├── reportEvents.m │ ├── reportGlobalDetrend.m │ ├── reportGlobalTrend.m │ ├── reportLineNoise.m │ ├── reportReference.m │ ├── showBadChannelDifferences.m │ ├── showBadWindows.m │ ├── showChannelTrend.m │ ├── showCollectionBoxplots.m │ ├── showCollectionStatistics.m │ ├── showCompositePlots.m │ ├── showCumulativeDistributions.m │ ├── showNoisyStatistics.m │ ├── showPipelineDefaults.m │ ├── showReferencePairedStatistics.m │ ├── showReferenceStatistics.m │ ├── showSpectrum.m │ ├── showTrendCorrelation.m │ ├── writeHtmlList.m │ ├── writeSummaryHeader.m │ ├── writeSummaryItem.m │ └── writeTextList.m └── utilities │ ├── backupEEGOptions.m │ ├── blasst │ ├── README.md │ ├── blasst.m │ ├── blasst_documentation.tex │ ├── blasst_internal.m │ ├── blasst_test.m │ └── pop_blasst.m │ ├── blasstLineNoise.m │ ├── calculateHuberMean.m │ ├── calculateSegmentSpectrum.m │ ├── checkForMissingFiles.m │ ├── checkPrepDefaults.m │ ├── checkStructureDefaults.m │ ├── chop.m │ ├── chronux_2_modified │ ├── License.txt │ └── spectral_analysis │ │ ├── continuous │ │ ├── CrossSpecMatc.m │ │ ├── chron_findpeaks.m │ │ ├── coherencyc.m │ │ ├── coherencyc_unequal_length_trials.m │ │ ├── coherencysegc.m │ │ ├── cohgramc.m │ │ ├── cohmatrixc.m │ │ ├── createdatamatc.m │ │ ├── evoked.m │ │ ├── extractdatac.m │ │ ├── fitlinesc.m │ │ ├── ftestc.m │ │ ├── ftestmovingwinc.m │ │ ├── locdetrend.m │ │ ├── locsmooth.m │ │ ├── mtdspecgramc.m │ │ ├── mtdspectrumc.m │ │ ├── mtfftc.m │ │ ├── mtpowerandfstatc.m │ │ ├── mtspecgramc.m │ │ ├── mtspecgramtrigc.m │ │ ├── mtspectrum_of_spectrumc.m │ │ ├── mtspectrumc.m │ │ ├── mtspectrumc_unequal_length_trials.m │ │ ├── mtspectrumsegc.m │ │ ├── mtspectrumtrigc.m │ │ ├── nonst_stat.m │ │ ├── quadcof.m │ │ ├── quadinv.m │ │ ├── rmlinesc.m │ │ ├── rmlinesmovingwinc.m │ │ ├── runline.m │ │ └── spsvd.m │ │ └── helper │ │ ├── change_row_to_column.m │ │ ├── check_consistency.m │ │ ├── coherr.m │ │ ├── cohmathelper.m │ │ ├── den_jack.m │ │ ├── dpsschk.m │ │ ├── getfgrid.m │ │ ├── getparams.m │ │ ├── jackknife.m │ │ └── specerr.m │ ├── cleanLineNoise.m │ ├── cleanupReference.m │ ├── compareEEG.m │ ├── convertCell2Str.m │ ├── findNoisyChannels.m │ ├── findUnusableChannels.m │ ├── fitSignificantFrequencies.m │ ├── fixNoisyFields.m │ ├── getBadChannelStructure.m │ ├── getBoundaryEvents.m │ ├── getEEGOptionsFile.m │ ├── getFileList.m │ ├── getPrepDefaults.m │ ├── getPrepVersion.m │ ├── getReferenceStructure.m │ ├── getStructureParameters.m │ ├── hasPrepErrors.m │ ├── interpolateChannels.m │ ├── localDetrend.m │ ├── outputPrepDefaults.m │ ├── outputPrepErrors.m │ ├── outputPrepParams.m │ ├── performReference.m │ ├── private │ ├── checkTapers.m │ ├── design_fir.m │ ├── filter_fast.m │ ├── filtfilt_fast.m │ ├── hlp_microcache.m │ └── spherical_interpolate.m │ ├── removeGlobalTrend.m │ ├── removeHuberMean.m │ ├── removeLineNoise.m │ ├── removeLinesMovingWindow.m │ ├── removeReference.m │ ├── removeTrend.m │ ├── resampleEEG.m │ ├── restoreEEGOptions.m │ ├── robustReference.m │ ├── 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