├── .Rbuildignore ├── .Rhistory ├── .gitignore ├── DESCRIPTION ├── NAMESPACE ├── R ├── get_mix_parameters.R ├── get_res.R └── main.R ├── README.Rmd ├── README.md ├── inst ├── docs │ ├── scLink.pdf │ ├── sclink.png │ └── scripts │ │ ├── real-brca.R │ │ ├── real-esc.R │ │ ├── real-tabulamuris.R │ │ ├── simulation.R │ │ └── supp │ │ ├── funs-get-res.R │ │ ├── get_mix_parameters.R │ │ └── pcorSimulator │ │ ├── controlsPcorSimulator.r │ │ ├── graphStructure.R │ │ ├── lowerTriInd.r │ │ └── pcorSimulator.R └── extdata │ ├── example.rds │ └── genes.rds ├── man ├── sclink_cor.Rd ├── sclink_net.Rd └── sclink_norm.Rd ├── scLink.Rproj └── vignettes ├── scLink-vignette.Rmd └── scLink-vignette.md /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Vivianstats/scLink/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.Rhistory: 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