├── README.md ├── README_zch.md ├── download_DDTI.py ├── pic ├── 分割训练测试过程.svg ├── 分割预处理过程.svg └── 大小结节对比.svg ├── requirement.txt ├── step1_preprocessing ├── cutROIwithExpand.m ├── get_file_list.m ├── getbiggest_connnection.m ├── preprocess.m └── step1_preprocessing.m └── step2to4_train_validate_inference ├── .idea ├── inspectionProfiles │ └── profiles_settings.xml ├── misc.xml ├── modules.xml ├── proj.iml └── workspace.xml ├── loader ├── __pycache__ │ ├── data_loader.cpython-36.pyc │ └── img_mask_aug.cpython-36.pyc ├── data_loader.py └── img_mask_aug.py ├── loss_func ├── ND_Crossentropy.py ├── __init__.py ├── __pycache__ │ ├── ND_Crossentropy.cpython-36.pyc │ ├── __init__.cpython-36.pyc │ ├── dice_helpers.cpython-36.pyc │ ├── dice_loss.cpython-36.pyc │ └── lovasz_losses.cpython-36.pyc ├── dice_helpers.py ├── dice_loss.py └── lovasz_losses.py ├── result └── TNSCUI │ └── test5_1 │ ├── config.txt │ ├── images │ └── Train_0_image.png │ ├── logs │ ├── Loss │ │ └── loss │ │ │ ├── events.out.tfevents.1598742642.new-SMBIOS │ │ │ └── events.out.tfevents.1598742664.new-SMBIOS │ ├── events.out.tfevents.1598742638.new-SMBIOS │ └── events.out.tfevents.1598742661.new-SMBIOS │ └── record.txt ├── segmentation_models_pytorch_4TorchLessThan120 ├── __init__.py ├── __pycache__ │ ├── __init__.cpython-36.pyc │ └── __version__.cpython-36.pyc ├── __version__.py ├── base │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-36.pyc │ │ ├── heads.cpython-36.pyc │ │ ├── initialization.cpython-36.pyc │ │ ├── model.cpython-36.pyc │ │ └── modules.cpython-36.pyc │ ├── heads.py │ ├── initialization.py │ ├── model.py │ └── modules.py ├── deeplabv3 │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-36.pyc │ │ ├── decoder.cpython-36.pyc │ │ └── model.cpython-36.pyc │ ├── decoder.py │ └── model.py ├── demo.py ├── encoders │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-36.pyc │ │ ├── _base.cpython-36.pyc │ │ ├── _preprocessing.cpython-36.pyc │ │ ├── _utils.cpython-36.pyc │ │ ├── densenet.cpython-36.pyc │ │ ├── dpn.cpython-36.pyc │ │ ├── efficientnet.cpython-36.pyc │ │ ├── inceptionresnetv2.cpython-36.pyc │ │ ├── inceptionv4.cpython-36.pyc │ │ ├── mobilenet.cpython-36.pyc │ │ ├── resnet.cpython-36.pyc │ │ ├── senet.cpython-36.pyc │ │ ├── vgg.cpython-36.pyc │ │ └── xception.cpython-36.pyc │ ├── _base.py │ ├── _preprocessing.py │ ├── _utils.py │ ├── densenet.py │ ├── dpn.py │ ├── efficientnet.py │ ├── inceptionresnetv2.py │ ├── inceptionv4.py │ ├── mobilenet.py │ ├── resnet.py │ ├── senet.py │ ├── vgg.py │ └── xception.py ├── fpn │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-36.pyc │ │ ├── decoder.cpython-36.pyc │ │ └── model.cpython-36.pyc │ ├── decoder.py │ └── model.py ├── linknet │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-36.pyc │ │ ├── decoder.cpython-36.pyc │ │ └── model.cpython-36.pyc │ ├── decoder.py │ └── model.py ├── pan │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-36.pyc │ │ ├── decoder.cpython-36.pyc │ │ └── model.cpython-36.pyc │ ├── decoder.py │ └── model.py ├── pspnet │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-36.pyc │ │ ├── decoder.cpython-36.pyc │ │ └── model.cpython-36.pyc │ ├── decoder.py │ └── model.py ├── unet │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-36.pyc │ │ ├── decoder.cpython-36.pyc │ │ └── model.cpython-36.pyc │ ├── decoder.py │ └── model.py └── utils │ ├── __init__.py │ ├── __pycache__ │ ├── __init__.cpython-36.pyc │ ├── base.cpython-36.pyc │ ├── functional.cpython-36.pyc │ ├── losses.cpython-36.pyc │ ├── meter.cpython-36.pyc │ ├── metrics.cpython-36.pyc │ └── train.cpython-36.pyc │ ├── base.py │ ├── functional.py │ ├── losses.py │ ├── meter.py │ ├── metrics.py │ └── train.py ├── step2_TrainAndValidate.py ├── step3_TestOrInference.py ├── step4_Merge.py ├── test_fold1.py ├── test_fold1_DDTI.ipynb ├── tnscui_utils ├── TNSCUI_preprocess.py ├── TNSUCI_util.py ├── __init__.py ├── __pycache__ │ ├── 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