├── AutoPET-OrganlabelsTr.zip ├── README.md ├── code ├── segment_anything │ ├── __init__.py │ ├── automatic_mask_generator.py │ ├── build_sam.py │ ├── build_sam3D.py │ ├── modeling │ │ ├── __init__.py │ │ ├── common.py │ │ ├── image_encoder.py │ │ ├── image_encoder3D.py │ │ ├── mask_decoder.py │ │ ├── mask_decoder3D.py │ │ ├── prompt_encoder.py │ │ ├── prompt_encoder3D.py │ │ ├── sam.py │ │ ├── sam3D.py │ │ ├── sam_model.py │ │ └── transformer.py │ ├── predictor.py │ └── utils │ │ ├── __init__.py │ │ ├── amg.py │ │ ├── onnx.py │ │ ├── transforms.py │ │ └── transforms3D.py ├── train_cpcl.py └── utils │ ├── __init__.py │ ├── click_method.py │ ├── compute_dataset_metrics.py │ ├── data_loader.py │ ├── data_paths.py │ ├── infer_utils.py │ ├── metric_utils.py │ └── prepare_data_from_nnUNet.py └── fig ├── Overview.png └── Segmentation.png /AutoPET-OrganlabelsTr.zip: -------------------------------------------------------------------------------- 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