├── .flake8 ├── .gitignore ├── .pylintrc ├── CFR.py ├── GRUD.py ├── LICENSE ├── R ├── ICLR-cpu-time.csv ├── ICLR-hyper-parameter-sensitivity.csv ├── ICLR-matched.csv ├── R.Rproj ├── cpu.pdf ├── hyper_param.pdf ├── match.pdf └── plot.R ├── README.md ├── SyncTwin.py ├── clair_helper.py ├── clairvoyance ├── README.md ├── __init__.py ├── base.py ├── datasets │ ├── __init__.py │ ├── data_loader.py │ └── dataset.py ├── preprocessing │ ├── __init__.py │ ├── data_preprocess.py │ ├── encoding.py │ ├── normalization.py │ └── outlier_filter.py ├── treatments │ ├── CRN │ │ ├── CRN_Base.py │ │ ├── CRN_Model.py │ │ ├── __init__.py │ │ ├── data_utils.py │ │ └── flip_gradient.py │ ├── RMSN │ │ ├── RMSN_Model.py │ │ ├── __init__.py │ │ ├── configs.py │ │ ├── core_routines.py │ │ ├── libs │ │ │ ├── __init__.py │ │ │ ├── model_rnn.py │ │ │ └── net_helpers.py │ │ ├── script_decoder_fit.py │ │ ├── script_decoder_test.py │ │ ├── script_propensity_generation.py │ │ ├── script_rnn_fit.py │ │ └── script_rnn_test.py │ ├── __init__.py │ └── treatments.py └── utils │ ├── __init__.py │ ├── data_utils.py │ └── model_utils.py ├── config.py ├── environment.yml ├── experiments ├── Fig3.ipynb ├── Fig3.sh ├── Tab2.sh ├── Tab5.sh ├── Tab6.sh ├── Tab7.sh ├── clair_benchmark.py ├── gp_benchmark.py ├── interpretability.py ├── pkpd-mc-nnm.R ├── pkpd_1nn.R ├── pkpd_covariate_matching.py ├── pkpd_rsc.py ├── pkpd_sim3_bias_generation.py ├── pkpd_sim3_cfr.py ├── pkpd_sim3_data_generation.py ├── pkpd_sim3_irregular_generation.py ├── pkpd_sim3_model_training.py ├── pkpd_synth_control.R ├── real_data.py ├── real_data.sh ├── real_data_inference.py ├── real_data_preprocess.ipynb ├── real_data_summary_stats.ipynb ├── reproduce_all.sh ├── run_one_sim.sh ├── run_one_sim_bias.sh ├── run_one_sim_irregular.sh ├── summarize_one_sim.sh └── synth_eval.py ├── pyproject.toml ├── real_data └── README.md ├── requirements.txt ├── requirements_R.txt ├── results ├── Fig3_C2_MAE.txt ├── Fig3_C3_MAE.txt ├── 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