├── .gitignore ├── CMakeCache.txt.tmpbc1f4 ├── CMakeLists.txt ├── CONTRIBUTING.md ├── README.md ├── Todo_List.txt ├── doc ├── figures │ ├── 1.png │ ├── 3D_IAEA_power1.png │ ├── 3D_IAEA_power2.png │ ├── 3D_IAEA_power3.png │ ├── 3D_IAEA_power4.png │ ├── 3D_VVER440.png │ ├── BIBlISMPc1.png │ ├── BIBlISMPc2.png │ ├── BIBlISMPc3.png │ ├── BIBlISMPc4.png │ ├── CodeCogsEqn.gif │ ├── c5g5_power_1-1.png │ ├── c5g5_power_2-1.png │ ├── c5g5_power_3-1.png │ ├── c5g5_power_4-1.png │ ├── favicon.png │ ├── langenbuch.png │ ├── vver440_1.png │ ├── vver440_2.png │ ├── vver440_3.png │ └── vver440_4.png └── logos │ ├── logo_UPV_principal_color.png │ ├── logo_imm_blue.png │ ├── logo_isirym.png │ └── mcin.png ├── examples ├── 1D │ ├── 1D_hom.xsec │ ├── 1D_hom_vacuum.prm │ ├── 1D_hom_zerocurrent.prm │ └── 1D_hom_zeroflux.prm ├── 2D_BIBLIS │ ├── biblis.xsec │ ├── biblis_SP1.prm │ ├── biblis_SP3.prm │ └── biblis_SP5.prm ├── 2D_C5G7-TD │ ├── 2D_c5g7_transport.ref │ ├── c5g7.prec │ ├── c5g7_SP1_ref1_FE2.prm │ ├── c5g7_SP3_ref1_FE2.prm │ ├── c5g7_SP5_ref1_FE2.prm │ ├── c5g7_transport.ref │ ├── input.geom-mat8.xml │ ├── input.geom.xml │ ├── input.mat.xml │ ├── mesh_ref0.tri │ ├── mesh_ref0.tri.vec │ ├── mesh_ref1.tri │ └── mesh_ref1.tri.vec ├── 2D_C5G7 │ ├── c5g7_SP3_ref1_FE2.prm │ ├── c5g7_ref1_FE2.prm │ ├── c5g7_transport.ref │ ├── input.geom.xml │ ├── input.mat.xml │ ├── mesh_ref1.tri │ └── mesh_ref1.tri.vec ├── 2D_C5G7_NN │ └── NN1.2 │ │ ├── c5g7.dyn.prm │ │ ├── c5g7.prec │ │ ├── c5g7_ref0_FE1_DSP3.prm │ │ ├── c5g7_ref1_FE2_DSP3.prm │ │ ├── input.dxs.xml │ │ ├── input.geom.xml │ │ ├── input.xs.xml │ │ ├── mesh_ref0.tri │ │ ├── mesh_ref0.tri.vec │ │ ├── mesh_ref1.tri │ │ └── mesh_ref1.tri.vec ├── 2D_TWIGL │ ├── twigl_diff_ramp_quarter.prm │ ├── twigl_quarter.xsec │ ├── twigl_sp1_ramp_quarter.prm │ ├── twigl_sp1_step_quarter.prm │ ├── twigl_sp3_ramp_quarter.prm │ └── twigl_sp3_step_quarter.prm ├── 2D_UOX_FA │ ├── 2D_UOX_fa.xsec │ ├── 2D_UOX_fe2_sp1.prm │ ├── 2D_UOX_fe2_sp3.prm │ └── output │ │ └── notignore.txt ├── 2D_VVER440 │ ├── 2D_VVER440.xsec │ ├── 2D_VVER440_FE3.prm │ ├── 2D_VVER440_SP3_FE3.prm │ ├── Gmsh │ │ ├── VVER440.geo │ │ └── VVER440.msh │ ├── Parcs │ │ ├── 2D_VVER440 │ │ └── 2D_VVER440.inp │ ├── VVER440.msh │ └── output │ │ └── notignore.txt ├── 3D_IAEA │ ├── IAEA.xsec │ ├── IAEA_FE3.prm │ ├── IAEA_SP3_FE3.prm │ └── output │ │ └── notignore.txt ├── 3D_Langenbuch │ ├── 3D_Langenbuch.bar │ ├── 3D_Langenbuch.xsec │ ├── 3D_Langenbuch_ds_fe2.prm │ ├── output │ │ └── notignore.txt │ └── static │ │ ├── 3D_Langenbuch_static.prm │ │ └── 3D_Langenbuch_static.xsec └── 3D_VVER440 │ ├── 3D_VVER440.bar │ ├── 3D_VVER440.xsec │ ├── 3D_VVER440_FE3.prm │ ├── Parcs │ ├── VVER440_3D │ └── VVER440_3D.inp │ ├── VVER440.msh │ ├── make_msh_VVER440.py │ └── output │ └── notignore.txt ├── femfussion_eclipse_format.xml ├── include ├── eps_solvers │ ├── eps_bifpam.h │ ├── eps_gd.h │ ├── eps_newton.h │ ├── eps_power_it.h │ ├── eps_solver.h │ ├── eps_solver_2g.h │ ├── pc_multilevel.h │ └── preconditioner.h ├── femffusion.h ├── io │ ├── input_complex_pert.h │ ├── input_geom.h │ ├── input_mat.h │ ├── input_settings.h │ ├── materials.h │ ├── matlab_io.h │ ├── perturbation.h │ ├── printing.h │ └── prob_geom.h ├── matrix_operators │ ├── matrix_operators_base.h │ ├── matrix_operators_base.h.orig │ ├── matrix_operators_complex_base.h │ ├── matrix_operators_free.h │ ├── matrix_operators_lupod.h │ ├── matrix_operators_noise_diff.h │ ├── matrix_operators_noise_spn.h │ ├── matrix_operators_petsc.h │ ├── matrix_operators_petsc_time.h │ ├── matrix_operators_sdpn.h │ ├── matrix_operators_small_time_mat.h │ ├── matrix_operators_spn.h │ └── matrix_operators_spn_time.h ├── noise │ ├── complex_perturbation.h │ ├── complex_solver.h │ ├── noise_diffusion.h │ ├── noise_full_spn.h │ ├── noise_spn.h │ └── preconditioner.h ├── performance.h ├── rom │ ├── ihs.h │ ├── rom_kinetics.h │ ├── rom_static.h │ └── rom_utils.h ├── static_diffusion.h ├── static_full_spn.h ├── static_sdpn.h ├── static_spn.h ├── test.h ├── time_computation.h ├── time_computation_spn.h ├── utils.h └── utils_base.h ├── postprocess ├── 1D_vibration_test_compare.py ├── 2D_fft_parcs.py ├── 2D_save_td_to_txt.py ├── 2D_vibration_VVER_hex_compare.py ├── 2D_vibration_test_compare.py ├── 2D_vibration_test_hex_compare.py ├── 3D_CROCUS_comparative.py ├── 3D_VVER1000_NOISE.py ├── __ init __.py ├── comp_coresim_femffusion.py ├── comp_hex.py ├── comparative.py ├── convergence_table_flux.py ├── convergence_table_noise.py ├── get_parcs_static.py ├── make_hex_mesh.py ├── plotErrors2D.py ├── plotErrors3D.py ├── plot_hexagonal.py ├── plot_hexagonal_noise.py ├── plot_noise_vtk.py ├── plot_utils.py ├── radial_VVER1000CORTEX.py ├── tests │ ├── test1.out.test │ ├── test2.out.test │ ├── test3out.test │ ├── test_2D_parcs.test │ ├── test_3D_parcs.test │ └── vtk.test ├── utils.py ├── vtk_test.py └── vtk_to_matlab.py ├── run_examples.sh ├── src ├── eps_solvers │ ├── eps_bifpam.cc │ ├── eps_gd.cc │ ├── eps_newton.cc │ ├── eps_power_it.cc │ ├── eps_solver.cc │ ├── eps_solver_2g.cc │ ├── pc_multilevel.cc │ └── preconditioner.cc ├── femffusion.cc ├── io │ ├── input_complex_pert.cc │ ├── input_geom.cc │ ├── input_mat.cc │ ├── materials.cc │ ├── matlab_io.cc │ ├── perturbation.cc │ ├── printing.cc │ └── prob_geom.cc ├── matrix_operators │ ├── matrix_operators_base.cc │ ├── matrix_operators_complex_base.cc │ ├── matrix_operators_free.cc │ ├── matrix_operators_lupod.cc │ ├── matrix_operators_noise_diff.cc │ ├── matrix_operators_noise_spn.cc │ ├── matrix_operators_petsc.cc │ ├── matrix_operators_petsc.cc.orig │ ├── matrix_operators_petsc_time.cc │ ├── matrix_operators_sdpn.cc │ ├── matrix_operators_small_time_mat.cc │ ├── matrix_operators_spn.cc │ └── matrix_operators_spn_time.cc ├── noise │ ├── complex_perturbation.cc │ ├── complex_solver.cc │ ├── noise_diffusion.cc │ ├── noise_full_spn.cc │ └── noise_spn.cc ├── performance.cc ├── rom │ ├── ihs.cc │ ├── rom_kinetics.cc │ ├── rom_static.cc │ └── rom_utils.cc ├── static_diffusion.cc ├── static_full_spn.cc ├── static_sdpn.cc ├── static_spn.cc ├── test.cc ├── test.cc.orig ├── time_computation.cc ├── time_computation_spn.cc └── utils.cc ├── test ├── 1D_C5G7_3cells │ ├── 1D_C5G7_all_cte_prec_din_ix.prm │ ├── 1D_C5G7_all_cte_prec_din_sil.prm │ ├── 1D_C5G7_all_cte_prec_din_six.prm │ ├── 1D_C5G7_all_cte_prec_static_ix.prm │ ├── 1D_C5G7_all_cte_prec_static_sil.prm │ ├── 1D_C5G7_all_cte_prec_static_six.prm │ ├── 1D_C5G7_all_cte_xsec_din_ix.prm │ ├── 1D_C5G7_all_cte_xsec_din_sil.prm │ ├── 1D_C5G7_all_cte_xsec_din_six.prm │ ├── 1D_C5G7_all_cte_xsec_static_ix.prm │ ├── 1D_C5G7_all_cte_xsec_static_sil.prm │ ├── 1D_C5G7_all_cte_xsec_static_six.prm │ ├── 1D_C5G7_cte_wp.xsec │ ├── 1D_C5G7_din_sil.prm │ ├── 1D_C5G7_lambda_cte_prec_din_sil.prm │ ├── 1D_C5G7_lambda_cte_prec_din_six.prm │ ├── 1D_C5G7_lambda_cte_prec_static_sil.prm │ ├── 1D_C5G7_lambda_cte_prec_static_six.prm │ ├── 1D_C5G7_static_sil.prm │ ├── het_small_cte.prec │ ├── het_small_cte.xsec │ ├── het_small_full.prec │ ├── het_small_full.xsec │ ├── het_small_lambda_cte.prec │ └── het_small_lambda_cte.xsec ├── 1D_hom_5cells │ ├── 1D_5cells.xsec │ ├── 1D_5cells_vacuum.prm │ ├── 1D_5cells_zerocurrent.prm │ └── 1D_5cells_zeroflux.prm ├── 1D_hom_5cells_1precursor │ ├── 1D_5cells.xsec │ ├── 1D_5cells_vacuum.prm │ ├── 1D_5cells_zerocurrent.prm │ └── 1D_5cells_zeroflux.prm ├── 1D_hom_5cells_mov │ ├── 1D_5cells.xsec │ ├── 1D_5cells_zeroflux.prm │ └── analitic_out ├── 1D_hom_5cells_mov_prec │ ├── 1D_5cells.xsec │ ├── 1D_5cells_2g_rom_LUPOD.prm │ ├── 1D_5cells_a1.prm │ ├── 1D_5cells_f1.prm │ ├── 1D_5cells_f1_bm.prm │ ├── 1D_5cells_f1_rom.prm │ ├── 1D_5cells_f1_rom_LUPOD.prm │ ├── 1D_5cells_f1_rom_LUPOD2.prm │ ├── 1D_5cells_f1_rom_LUPOD3.prm │ ├── 1D_5cells_rom.xsec │ └── 1D_5cells_rom_2g.xsec ├── 1D_hom_ROM_static │ ├── 1D_hom.xsec │ ├── 1D_hom_FEM1_groupwise.prm │ ├── 1D_hom_LUPOD_groupwise.prm │ ├── 1D_hom_LUPOD_mono.prm │ ├── 1D_hom_LUPODext_groupwise.prm │ ├── 1D_hom_LUPODext_mono.prm │ ├── 1D_hom_POD_groupwise.prm │ ├── 1D_hom_POD_mono.prm │ └── 1D_hom_random_groupwise.prm ├── 1D_hom_slab_10cm │ ├── 1D.xsec │ ├── 1D_hom_vacuum.prm │ ├── 1D_hom_zerocurrent.prm │ └── 1D_hom_zeroflux.prm ├── 1D_hom_slab_2cm │ ├── 1D_hom.xsec │ ├── 1D_hom_fullallocated.prm │ ├── 1D_hom_fullmatrixfree.prm │ ├── 1D_hom_vacuum.prm │ ├── 1D_hom_zerocurrent.prm │ └── 1D_hom_zeroflux.prm ├── 1D_hom_slab_2cm_SP3 │ ├── 1D_hom.xsec │ ├── 1D_hom_SP3.prm │ ├── 1D_hom_SP3_krylov.prm │ ├── 1D_hom_SP5.prm │ ├── 1D_hom_zerocurrent.prm │ └── 1D_hom_zeroflux.prm ├── 1D_hom_slab_2g_2cm │ ├── 1D_hom.xsec │ ├── 1D_hom_ROM.prm │ ├── 1D_hom_vacuum.prm │ ├── 1D_hom_zerocurrent.prm │ └── 1D_hom_zeroflux.prm ├── 1D_noise_SPN │ ├── 1D.dxs │ ├── 1D.dyn.prm │ ├── 1D.xsec │ ├── 1D_noise_diffusion.prm │ ├── 1D_noise_fsp1.prm │ ├── 1D_noise_fsp3.prm │ ├── 1D_noise_sp1.prm │ ├── 1D_noise_sp3.prm │ └── gen_1D_2g.m ├── 1D_noise_SPN_1g │ ├── 1D_noise_diffusion.prm │ ├── 1D_noise_fsp1.prm │ ├── 1D_noise_sp1.prm │ ├── 1g.dxs │ ├── 1g.dyn.prm │ └── 1g.xsec ├── 2D_CROCUS │ ├── crocus_ds.prm │ └── crocus_local.xsec ├── 2D_assembly_structured │ ├── assembly.mat.xml │ ├── assembly_vacuum.prm │ ├── assembly_zerocurrent.prm │ ├── geom_vaccum.xml │ └── geom_zerocurrent.xml ├── 2D_assembly_unstructured │ ├── assembly.geo │ ├── assembly.geo.opt │ ├── assembly.msh │ ├── assembly.xsec │ ├── assembly_vacuum.prm │ ├── assembly_zerocurrent.prm │ └── makemesh.sh ├── 2D_biblis_matrixfree │ ├── biblis.xsec │ ├── biblis_FE1_allocated.prm │ ├── biblis_FE1_fullmatfree_zerocurrent.prm │ ├── biblis_FE1_fullmatrixfree.prm │ ├── biblis_FE1_fullmatrixfree_zeroflux.prm │ ├── biblis_FE1_nondiagonal.prm │ ├── biblis_FE3_allocated.prm │ ├── biblis_FE3_fullmatfree_zerocurrent.prm │ ├── biblis_FE3_fullmatrixfree.prm │ ├── biblis_FE3_fullmatrixfree_bifpam.prm │ ├── biblis_FE3_fullmatrixfree_powerit.prm │ ├── biblis_FE3_fullmatrixfree_zeroflux.prm │ └── biblis_FE3_nondiagonal.prm ├── 2D_biblis_noise │ ├── biblis.dxs │ ├── biblis.dyn.prm │ ├── biblis.xsec │ └── biblis_FE2.prm ├── 2D_biblis_test │ ├── biblis.xsec │ ├── biblis_FE3.prm │ ├── biblis_FE3_allocated.prm │ ├── biblis_FE3_matrixfree.prm │ ├── biblis_SP3.prm │ ├── biblis_SP3_bifpam.prm │ └── biblis_bipfam.prm ├── 2D_hex_hom │ ├── 2D_hex.msh │ ├── 2D_hex.xsec │ ├── 2D_hex_vacuum.prm │ ├── 2D_hex_zerocurrent.prm │ └── 2D_hex_zeroflux.prm ├── 2D_hom │ ├── 2D_hom.xsec │ ├── 2D_hom_vacuum.prm │ ├── 2D_hom_zerocurrent.prm │ └── 2D_hom_zeroflux.prm ├── 2D_hom_multigroup │ ├── 2D_hom_8g.xsec │ ├── 2D_hom_krylov_multigroup_vaccum.prm │ ├── 2D_hom_vacuum.prm │ ├── 2D_hom_zerocurrent.prm │ └── 2D_hom_zeroflux.prm ├── 2D_hom_slab_2cm │ ├── 2D_hom.xsec │ ├── 2D_hom_vacuum.prm │ ├── 2D_hom_zerocurrent.prm │ └── 2D_hom_zeroflux.prm ├── 2D_pin_save_load │ ├── geom_vaccum.xml │ ├── mesh.tri.vec │ ├── pin.mat.xml │ └── pin_vacuum.prm ├── 2D_pin_structured │ ├── geom_vaccum.xml │ ├── geom_zerocurrent.xml │ ├── geom_zeroflux.xml │ ├── pin.mat.xml │ ├── pin_vacuum.prm │ ├── pin_zerocurrent.prm │ ├── pin_zerocurrent_dsp3.prm │ ├── pin_zerocurrent_fsp3.prm │ └── pin_zeroflux.prm ├── 2D_pin_unstructured │ ├── makemesh.sh │ ├── pin.geo │ ├── pin.geo.opt │ ├── pin.msh │ ├── pin.xsec │ ├── pin_vacuum.prm │ ├── pin_zerocurrent.prm │ └── pin_zeroflux.prm ├── 2D_test_vibration │ ├── 2D_test.dxs │ ├── 2D_test.dyn.prm │ ├── 2D_test.prm │ ├── 2D_test.xsec │ ├── 2D_test_ref.dxs │ ├── 2D_test_ref.dyn.prm │ ├── 2D_test_ref.prm │ └── 2D_test_ref.xsec ├── 2D_test_vibration_hex │ ├── 2D_hex_test.msh │ ├── 2D_test.dxs │ ├── 2D_test.dyn.prm │ ├── 2D_test.prm │ ├── 2D_test.xsec │ └── make_mesh.py ├── 3D_IAEA_noise │ ├── IAEA.dxs │ ├── IAEA.dyn.prm │ ├── IAEA.xsec │ └── IAEA_FE1.prm ├── 3D_IAEA_test │ ├── IAEA.xsec │ ├── IAEA_FE1.prm │ ├── IAEA_FE1_allocated.prm │ ├── IAEA_FE1_fullmatrixfree.prm │ ├── IAEA_FE1_matrixfree.prm │ └── IAEA_FE1_nondiag.prm ├── 3D_Langenbuch │ ├── 3D_Langenbuch.bar │ ├── 3D_Langenbuch.xsec │ ├── 3D_Langenbuch_1per.xsec │ ├── 3D_Langenbuch_2.bar │ ├── 3D_Langenbuch_2per.xsec │ ├── 3D_Langenbuch_ds.prm │ ├── 3D_Langenbuch_ds_all.prm │ ├── 3D_Langenbuch_ds_oop.prm │ ├── 3D_Langenbuch_ds_reinit.prm │ ├── 3D_Langenbuch_ds_reinit_load.prm │ ├── 3D_Langenbuch_ds_rods.prm │ ├── 3D_Langenbuch_ds_rods_mov.prm │ ├── 3D_Langenbuch_fe1_alpha.prm │ ├── 3D_Langenbuch_fe1_gamma.prm │ ├── 3D_Langenbuch_mov.bar │ ├── 3D_Langenbuch_rom_rods.prm │ └── 3D_Langenbuch_static.xsec ├── 3D_het_vel │ ├── 3D_ds_ramp.prm │ ├── 3D_ds_ramp_sp3.prm │ ├── 3D_ds_ramp_sp5.prm │ └── 3D_het.xsec ├── 3D_holes │ ├── holes.prm │ └── holes.xsec ├── 3D_roseton │ ├── roseton.bar │ ├── roseton.msh │ ├── roseton.xsec │ └── roseton_ds.prm ├── 3D_roseton_test │ ├── Gmsh │ │ ├── roseton.geo │ │ ├── roseton.geo.opt │ │ └── roseton.msh │ ├── Parcs │ │ ├── parcs12.inp │ │ ├── parcs24.inp │ │ ├── parcs36.inp │ │ └── parcs_48.inp │ ├── roseton.bar │ ├── roseton.msh │ ├── roseton.xsec │ └── roseton_FE1.prm ├── 3D_structured │ ├── assembly.mat.xml │ ├── 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