├── .Rbuildignore ├── .gitignore ├── DESCRIPTION ├── LICENSE ├── NAMESPACE ├── R ├── fs.R ├── packagegename-data.R └── plots.R ├── README.md ├── Redeconve manual.html ├── Redeconve manual.ipynb ├── Redeconve.Rproj ├── data └── basic.rda ├── man ├── cell.occur.Rd ├── cell.sampling.Rd ├── coloc.network.Rd ├── deconvoluting.Rd ├── deg.dotplot.Rd ├── extract.seurat.sc.Rd ├── extract.seurat.st.Rd ├── extract.subgraph.Rd ├── gene.filter.Rd ├── get.ref.Rd ├── hNpp.Rd ├── resids.Rd ├── sc2type.Rd ├── show.cellsofinterest.Rd ├── spatial.cell.number.Rd ├── spatial.gene.Rd ├── spatial.piechart.Rd ├── spot.pie.Rd ├── to.absolute.abundance.Rd └── to.proportion.Rd └── vignettes ├── .gitignore ├── Redeconve.Rmd ├── Redeconve.html └── Redeconve_files └── figure-html ├── unnamed-chunk-14-1.png ├── unnamed-chunk-15-1.png ├── unnamed-chunk-16-1.png ├── unnamed-chunk-17-1.png └── unnamed-chunk-18-1.png /.Rbuildignore: -------------------------------------------------------------------------------- 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