├── .gitattributes ├── .gitignore ├── LICENSE ├── README.md ├── coco ├── .gitignore ├── asl │ ├── LICENSE │ ├── MODEL_ZOO.md │ ├── README.md │ ├── infer.py │ ├── pics │ │ ├── 000000000885.jpg │ │ ├── ASL_comparison.png │ │ ├── example_inference.jpeg │ │ └── example_inference_open_images.jpeg │ ├── requirements.txt │ └── src │ │ ├── helper_functions │ │ └── helper_functions.py │ │ ├── loss_functions │ │ └── losses.py │ │ └── models │ │ ├── __init__.py │ │ ├── tresnet │ │ ├── __init__.py │ │ ├── layers │ │ │ ├── anti_aliasing.py │ │ │ ├── avg_pool.py │ │ │ └── general_layers.py │ │ └── tresnet.py │ │ └── utils │ │ ├── __init__.py │ │ └── factory.py ├── environment.yml ├── models │ └── MS_COCO_TResNet_xl_640_88.4.pth ├── outputs │ ├── grid_fig.pdf │ ├── histograms │ │ ├── 0_05_0_1_coco_histograms.pdf │ │ └── 0_1_0_1_coco_histograms.pdf │ └── infer.svg └── src │ ├── asl │ ├── helper_functions │ │ └── helper_functions.py │ ├── loss_functions │ │ └── losses.py │ └── models │ │ ├── __init__.py │ │ ├── tresnet │ │ ├── __init__.py │ │ ├── layers │ │ │ ├── anti_aliasing.py │ │ │ ├── avg_pool.py │ │ │ └── general_layers.py │ │ └── tresnet.py │ │ └── utils │ │ ├── __init__.py │ │ └── factory.py │ ├── bentkus.py │ ├── grid_fig.py │ ├── inplace_abn │ ├── __init__.py │ ├── _backend.py │ ├── abn.py │ ├── functions.py │ └── group.py │ ├── risk_histogram.py │ └── utils.py ├── core ├── bounds.py └── concentration.py ├── hierarchical_imagenet ├── .gitignore ├── __init__.py ├── grid_hierarchical.py ├── map_clsloc.txt ├── ntree.py ├── outputs │ ├── grid_fig.pdf │ ├── hierarchical_grid_fig.pdf │ └── histograms │ │ ├── 0_05_0_1_1000_hierarchical_imagenet_histograms.pdf │ │ ├── 0_05_0_1_30000_hierarchical_imagenet_histograms.pdf │ │ ├── 0_05_0_1_30000_protein_histograms.pdf │ │ └── 0_05_0_1_4000_hierarchical_imagenet_histograms.pdf ├── risk_histogram.py ├── tree_example.py ├── utils.py └── wordnet_hierarchy.json ├── imagenet ├── .gitignore ├── README.md ├── __init__.py ├── map_clsloc.txt ├── outputs │ └── histograms │ │ ├── 0_05_0_1_30000_imagenet_histograms.pdf │ │ └── 0_1_0_1_30000_imagenet_histograms.pdf ├── risk_histogram.py └── utils.py ├── media ├── rcps_title.svg ├── ucb_onload.svg ├── ucb_onmouse.svg └── ucb_onscroll.svg ├── outputs └── concentration_efficiency │ ├── 0_1_concentration_efficiency.pdf │ ├── 0_4_concentration_efficiency.pdf │ ├── 1_concentration_efficiency.pdf │ └── pinelis_utev.pdf ├── polyps ├── .gitignore ├── PraNet │ ├── .gitignore │ ├── .idea │ │ ├── .gitignore │ │ ├── PraNet_Submit.iml │ │ ├── inspectionProfiles │ │ │ └── Project_Default.xml │ │ ├── misc.xml │ │ ├── modules.xml │ │ └── vcs.xml │ ├── README.md │ ├── __init__.py │ ├── eval │ │ ├── CalMAE.m │ │ ├── Enhancedmeasure.m │ │ ├── Fmeasure_calu.m │ │ ├── README.md │ │ ├── S_object.m │ │ ├── S_region.m │ │ ├── StructureMeasure.m │ │ ├── main.m │ │ └── original_WFb.m │ ├── imgs │ │ ├── framework-final-min.png │ │ ├── qualitative_results.png │ │ ├── quantiative_results_1.png │ │ └── quantiative_results_2.png │ ├── models │ │ └── res2net50_v1b_26w_4s-3cf99910.pth │ ├── process_all_datasets.py │ ├── snapshots │ │ └── PraNet_Res2Net │ │ │ └── PraNet-19.pth │ └── utils │ │ ├── dataloader.py │ │ ├── format_conversion.py │ │ └── utils.py ├── animation_nested_sets.py ├── conformal_grid_fig.py ├── connected_components_histogram.py ├── multipolyp_grid_fig.py ├── nested_set_four_rows.py ├── plot_risk_hoeffding.py ├── polyp_utils.py ├── risk_histogram.py └── simplified_risk_histogram.py ├── proteins ├── .gitignore ├── T0995_3WUY.png ├── grid_fig.py ├── outputs │ ├── histograms │ │ ├── 0_05_0_1_35_protein_histograms.pdf │ │ └── 0_1_0_1_35_protein_histograms.pdf │ └── protein_grid_fig.pdf ├── protein_utils.py ├── risk_histogram.py └── utils.py ├── requirements.txt └── scripts ├── R ├── bentkus_test.R └── mean_concentration.R ├── bennett_test.py ├── bentkus_test.py ├── concentration.py ├── discrete_bennett_test.py ├── hbb_test.py ├── 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