├── HLI.js
├── LICENSE
├── README.md
├── TPI.js
├── climate.js
├── cloudMasking.js
├── example.js
├── fire.js
├── getNearestImage.js
├── radiometricCorrection.js
├── test.js
└── utils.js
/HLI.js:
--------------------------------------------------------------------------------
1 | var utils = require("users/aazuspan/geeTools:utils.js");
2 |
3 | /**
4 | * Calculate McCune and Keon 2002 Heat Load Index (HLI) with corrected coefficients from McCune 2007. This
5 | * implementation follows the R spatialEco library with the addition of per-pixel latitude calculation.
6 | * @param {ee.Image} x An elevation image.
7 | * @param {object} optionalParamters A dictionary of parameters to use in place of default parameters.
8 | * @param {number} optionalParameters.forceLatitude A fixed latitude in degrees to use in HLI calculations. If missing,
9 | * latitudes will be calculated per-pixel.
10 | * @param {string} optionalParameters.forceHemisphere A fixed hemisphere to use in HLI calculations. One of "north" or
11 | * "south". If missing, the hemisphere will be calculated per-pixel based on latitude.
12 | * @return {ee.Image} The McCune and Keon 2002 Heat Load Index.
13 | */
14 | exports.hli = function (x, optionalParameters) {
15 | var params = {
16 | forceLatitude: null,
17 | forceHemisphere: null,
18 | };
19 |
20 | params = utils.updateParameters(params, optionalParameters);
21 |
22 | // If a latitude is forced, use the fixed latitude
23 | if (params.forceLatitude) {
24 | try {
25 | var lat = ee.Image.constant(ee.Number(params.forceLatitude));
26 | } catch (err) {
27 | throw (
28 | 'Invalid forceLatitude argument "' +
29 | params.forceLatitude +
30 | '". Argument must be a number or missing.'
31 | );
32 | }
33 | }
34 | // Otherwise, use per-pixel latitudes
35 | else {
36 | lat = ee.Image.pixelLonLat().select("latitude");
37 | }
38 | lat = utils.deg2rad(lat);
39 |
40 | // If a hemisphere is forced, set the aspect folding coefficient based on the hemisphere
41 | if (params.forceHemisphere) {
42 | var foldCoeffs = { north: 225, south: 315 };
43 | try {
44 | var foldCoeff = ee.Image.constant(
45 | foldCoeffs[params.forceHemisphere.toLowerCase()]
46 | );
47 | } catch (err) {
48 | throw (
49 | 'Invalid forceHemisphere argument "' +
50 | params.forceHemisphere +
51 | '". Argument must be "north", "south", or missing.'
52 | );
53 | }
54 | }
55 | // Otherwise, set the aspect folding coefficient based on latitude (N = 225, S = 315)
56 | else {
57 | foldCoeff = ee.Image(225).where(lat.lt(0), 315);
58 | }
59 |
60 | var slope = utils.deg2rad(ee.Terrain.slope(x));
61 | // Folded aspect
62 | var aspect = utils.deg2rad(
63 | ee.Terrain.aspect(x).subtract(foldCoeff).abs().multiply(-1).add(180).abs()
64 | );
65 |
66 | // Equation from McCune 2002 with corrected coefficients from McCune 2007
67 | var x1 = slope.cos().multiply(lat.cos()).multiply(1.582);
68 | var x2 = slope
69 | .sin()
70 | .multiply(lat.sin())
71 | .multiply(aspect.cos())
72 | .multiply(-1.5);
73 | var x3 = slope.sin().multiply(lat.sin()).multiply(-0.262);
74 | var x4 = slope.sin().multiply(aspect.sin()).multiply(0.607);
75 |
76 | var h = x1.add(x2).add(x3).add(x4).add(-1.467).exp().rename("HLI");
77 |
78 | return h;
79 | };
80 |
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
/README.md:
--------------------------------------------------------------------------------
1 | # geeTools
2 |
3 | Remote sensing and spatial analysis tools for Google Earth Engine.
4 |
5 | 
6 |
7 | ## Table of Contents
8 |
9 | - [Usage](https://github.com/aazuspan/geeTools#Usage)
10 | - [Examples](https://github.com/aazuspan/geeTools#Examples)
11 | - [Burn Severity](https://github.com/aazuspan/geeTools#Burn-Severity)
12 | - [Fire Perimeter Detection](https://github.com/aazuspan/geeTools#Fire-Perimeter-Detection)
13 | - [Cloud Probability Masking](https://github.com/aazuspan/geeTools#Cloud-Probability-Masking)
14 | - [Heat Load Index](https://github.com/aazuspan/geeTools#Heat-Load-Index)
15 | - [Slope Position](https://github.com/aazuspan/geeTools#Slope-Position)
16 | - [Dark Object Subtraction](https://github.com/aazuspan/geeTools#Dark-Object-Subtraction)
17 | - [References](https://github.com/aazuspan/geeTools#References)
18 |
19 | ## Usage
20 |
21 | To import a module, include the following code in your GEE script:
22 |
23 | ```javascript
24 | var foo = require("users/aazuspan/geeTools:{module name}");
25 | foo.bar();
26 | ```
27 |
28 | For example:
29 |
30 | ```javascript
31 | var fire = require("users/aazuspan/geeTools:fire.js")
32 | fire.calculateBurnSeverity( ... );
33 | ```
34 |
35 | ## Examples
36 |
37 | ### Burn Severity
38 |
39 | Calculate pre- and post-fire NBR, dNBR (Key & Benson, 2005), RdNBR (Miller & Thode, 2007), and basal area mortality (Reilly et. al., 2017) using prefire and postfire imagery.
40 |
41 | ```javascript
42 | var fire = require("users/aazuspan/geeTools:fire.js");
43 |
44 | // L8 imagery prior to the fire
45 | var prefire = ee.Image("LANDSAT/LC08/C01/T1_TOA/LC08_046031_20170628");
46 | // L8 imagery one year after the fire
47 | var postfire = ee.Image("LANDSAT/LC08/C01/T1_TOA/LC08_046031_20180701");
48 |
49 | // Specify relevant band labels for imagery
50 | var nir = "B5";
51 | var swir = "B6";
52 |
53 | // Calculate various burn severity metrics
54 | var severity = fire.calculateBurnSeverity(prefire, postfire, nir, swir);
55 | ```
56 |
57 | 
58 |
59 | ### Fire Perimeter Detection
60 |
61 | Map active burning area or cumulative area burned at customizable time intervals over a time period, such as area burned every 6 hours over 10 days. This implementation uses GOES-16 and GOES-17 imagery, so fire dates are restricted based on availability of that data.
62 |
63 | ```javascript
64 | var fire = require("users/aazuspan/geeTools:fire.js");
65 |
66 | // Set the date range
67 | var start = "2020-09-05";
68 | var end = "2020-09-15";
69 |
70 | // Apply a majority filter to smooth the GOES data
71 | var smooth = true;
72 | // Use the default kernel (or pass any ee.Kernel)
73 | var smoothKernel = null;
74 | // Generate cumulative area burned since start rather than instantaneous area burned.
75 | var cumulative = true;
76 | // Set the time interval in hours
77 | var timeDelta = 6;
78 |
79 | // Generate an image collection showing cumulative area burned since the start at each time interval
80 | var burnedAreaImg = fire.periodicFireBoundaries(
81 | start,
82 | end,
83 | aoi,
84 | smooth,
85 | smoothKernel,
86 | cumulative,
87 | timeDelta
88 | );
89 |
90 | // Desired pixel size in meters
91 | var scale = 500;
92 | var maxPixels = 1e12;
93 | // Simplify the polygon perimeter to remove stairstep effect and reduce size
94 | var simplify = true;
95 | // Max error, in meters, for simplifcation. Higher error will increase the level of simplification
96 | var maxError = 500;
97 |
98 | // Convert the image collection into vector fire perimeters
99 | var burnedAreaPoly = fire.vectorizeBoundaryCollection(
100 | collection,
101 | scale,
102 | aoi,
103 | maxPixels,
104 | simplify,
105 | maxError
106 | );
107 | ```
108 |
109 | 
110 |
111 | ### Cloud Probability Masking
112 |
113 | Use cloud probability data to mask clouds in imagery.
114 |
115 | ```javascript
116 | var cloudMasking = require("users/aazuspan/geeTools:cloudMasking.js");
117 |
118 | // Load a Sentinel-2 image (1C or 2A)
119 | var s2 = ee.Image("COPERNICUS/S2/20190113T190741_20190113T190736_T10TEK");
120 | // Load the corresponding cloud probability image
121 | var prob = ee.Image(
122 | "COPERNICUS/S2_CLOUD_PROBABILITY/20190113T190741_20190113T190736_T10TEK"
123 | );
124 |
125 | // Mask clouds in the original image
126 | var cloudMasked = cloudMasking.probabilityCloudMask(s2, prob);
127 | ```
128 |
129 | 
130 |
131 | ### Heat Load Index
132 |
133 | Calculate Heat Load Index (HLI) from elevation (McCune, 2007).
134 |
135 | ```javascript
136 | var hli = require("users/aazuspan/geeTools:HLI.js");
137 |
138 | // Load elevation data
139 | var srtm = ee.Image("CGIAR/SRTM90_V4");
140 |
141 | // Generate HLI data
142 | var h = hli.hli(srtm);
143 | ```
144 |
145 | 
146 |
147 | ### Slope Position
148 |
149 | Calculate TPI and slope position from elevation (Weiss, 2001).
150 |
151 | ```javascript
152 | var tpi = require("users/aazuspan/geeTools:TPI.js");
153 |
154 | // Load elevation data
155 | var srtm = ee.Image("CGIAR/SRTM90_V4");
156 |
157 | // Define an area of interest
158 | var aoi = ee.Geometry.Polygon(
159 | [
160 | [
161 | [-123.92382561385939, 42.39507820959633],
162 | [-123.92382561385939, 41.57642883612384],
163 | [-122.83343254745314, 41.57642883612384],
164 | [-122.83343254745314, 42.39507820959633],
165 | ],
166 | ],
167 | null,
168 | false
169 | );
170 |
171 | // Calculate slope in degrees
172 | var slope = ee.Terrain.slope(srtm);
173 |
174 | // Set TPI window parameters. These have a significant impact on output results.
175 | var radius = 300;
176 | var shape = "square";
177 | var units = "meters";
178 |
179 | // Calculate a TPI image
180 | var tpi300 = tpi.tpi(srtm, radius, shape, units);
181 |
182 | // Use the default "flat" definition of 5 degrees
183 | var flat = null;
184 | // Set the output pixel size in meters
185 | var scale = 100;
186 |
187 | // Reclassify TPI to discrete slope positions
188 | var slopePosition300 = tpi.slopePosition(tpi300, slope, flat, aoi, scale);
189 | ```
190 |
191 | 
192 |
193 | ### Dark Object Subtraction
194 |
195 | Use dark object subtraction (DOS) to perform radiometric normalization and atmospheric correction.
196 |
197 | ```javascript
198 | var radCor = require("users/aazuspan/geeTools:radiometricCorrection.js");
199 |
200 | // Identify a reference dark object, such as deep water
201 | var darkObject = ee.Geometry.Polygon(
202 | [
203 | [
204 | [-124.74266276966597, 42.12268590007055],
205 | [-124.74266276966597, 41.93396768286303],
206 | [-124.52705608021284, 41.93396768286303],
207 | [-124.52705608021284, 42.12268590007055],
208 | ],
209 | ],
210 | null,
211 | false
212 | );
213 |
214 | // Load any image
215 | var img = ee.Image("LANDSAT/LC08/C01/T1_TOA/LC08_046031_20170628");
216 |
217 | // Pixel size in meters
218 | var scale = 30;
219 | var maxPixels = 1e13;
220 |
221 | // Use Dark Object Subtraction to correct for atmospheric distortion
222 | var imgDOS = radCor.darkObjectSubtraction(img, darkObject, scale, maxPixels);
223 | ```
224 |
225 | 
226 |
227 | ## References
228 |
229 | - Key, C. H., & Benson, N. C. (2005). Landscape assessment: Remote sensing ofseverity, the Normalized Burn Ratio. In D. C. Lutes (Ed.), FIREMON: Fireeffects monitoring and inventory system. General Technical Report, RMRS-GTR-164-CD:LA1-LA51. (pp.) Ogden, UT: USDA Forest Service, Rocky Mountain Research Station.
230 | - McCune, B. (2007). Improved estimates of incident radiation and heat load using non- parametric regression against topographic variables. Journal of Vegetation Science, 18(5), 751–754. doi:10.1111/j.1654-1103.2007.tb02590.x
231 | - Miller, J. D., & Thode, A. E. (2007). Quantifying burn severity in a heterogeneous landscape with a relative version of the delta Normalized Burn Ratio (dNBR). Remote Sensing of Environment, 109(1), 66–80. doi:10.1016/j.rse.2006.12.006
232 | - Reilly, M. J., Dunn, C. J., Meigs, G. W., Spies, T. A., Kennedy, R. E., Bailey, J. D., & Briggs, K. (2017). Contemporary patterns of fire extent and severity in forests of the Pacific Northwest, USA (1985-2010). Ecosphere, 8(3), e01695. doi:10.1002/ecs2.1695
233 | - Weiss, A.D., 2001. Topographic position and landforms analysis. Poster Presentation,
234 | ESRI Users Conference, San Diego, CA.
235 |
236 | ---
237 |
238 | [Top](https://github.com/aazuspan/geeTools#geeTools)
239 |
--------------------------------------------------------------------------------
/TPI.js:
--------------------------------------------------------------------------------
1 | var utils = require("users/aazuspan/geeTools:utils.js");
2 |
3 | // Calculate topographic position index based on a DEM image, following Weiss 2001.
4 | // Radius, window_shape, and units define the TPI kernel, and are passed to ee.Image.focal_mean
5 | exports.tpi = function (dem, optionalParameters) {
6 | // Default parameters
7 | var params = {
8 | radius: 300,
9 | windowShape: "circle",
10 | units: "meters",
11 | };
12 |
13 | params = utils.updateParameters(params, optionalParameters);
14 |
15 | dem = dem.double();
16 | var r = dem
17 | .subtract(dem.focal_mean(params.radius, params.windowShape, params.units))
18 | .add(0.5)
19 | .int()
20 | .rename("TPI");
21 | return r;
22 | };
23 |
24 | // Reclassify a continuous TPI image into slope positions, following Weiss 2001
25 | exports.slopePosition = function (tpi, slope, region, optionalParameters) {
26 | var params = {
27 | flatDegrees: 5,
28 | scale: null,
29 | maxPixels: 1e12,
30 | };
31 |
32 | params = utils.updateParameters(params, optionalParameters);
33 |
34 | // Calculate the TPI standard deviation
35 | var sd = tpi
36 | .reduceRegion({
37 | reducer: ee.Reducer.stdDev(),
38 | geometry: region,
39 | scale: params.scale,
40 | maxPixels: params.maxPixels,
41 | })
42 | .getNumber(tpi.bandNames().get(0));
43 |
44 | // Reclassify TPI to slope position
45 | var tpiReclass = ee
46 | .Image(0)
47 | // Ridge
48 | .where(tpi.gt(sd), 1)
49 | // Upper slope
50 | .where(tpi.gt(sd.multiply(0.5)).and(tpi.lte(sd)), 2)
51 | // Middle slope
52 | .where(
53 | tpi
54 | .gt(sd.multiply(-0.5))
55 | .and(tpi.lt(sd.multiply(0.5)).and(slope.gt(params.flatDegrees))),
56 | 3
57 | )
58 | // Flat slope
59 | .where(
60 | tpi
61 | .gte(sd.multiply(-0.5))
62 | .and(tpi.lte(sd.multiply(0.5)).and(slope.lte(params.flatDegrees))),
63 | 4
64 | )
65 | // Lower slope
66 | .where(tpi.gte(sd.multiply(-1)).and(tpi.lt(sd.multiply(-0.5))), 5)
67 | // Valley
68 | .where(tpi.lt(sd.multiply(-1)), 6)
69 | .rename("slopePosition");
70 |
71 | return tpiReclass;
72 | };
73 |
--------------------------------------------------------------------------------
/climate.js:
--------------------------------------------------------------------------------
1 | /**
2 | * Calculate relative humidity percentage following Bolton 1980.
3 | * @see {@link https://archive.eol.ucar.edu/projects/ceop/dm/documents/refdata_report/eqns.html}
4 | * @param {ee.Image | ee.Number} q - Specific humidity, unitless.
5 | * @param {ee.Image | ee.Number} p - Pressure in Pa.
6 | * @param {ee.Image | ee.Number} t - Temperature in C.
7 | * @returns {ee.Image | ee.Number} Relative humidity, values between 0 and 100.
8 | */
9 | exports.relativeHumidity = function (q, p, t) {
10 | var es = t.multiply(17.67).divide(t.add(243.5)).exp().multiply(6.112);
11 | var e = q.multiply(p).divide(q.multiply(0.378).add(0.622));
12 |
13 | var RH = e.divide(es).clamp(0, 100);
14 |
15 | if (RH instanceof ee.Image) {
16 | RH = RH.rename("RH");
17 | }
18 |
19 | return RH;
20 | };
21 |
22 |
23 | /** Calculate vapor pressure deficit
24 | * @param {ee.Image | ee.Number} t - Air temperature.
25 | * @param {ee.Image | ee.Number} rh - Relative humidity.
26 | * @returns {ee.Image | ee.Number} Vapor pressure deficit.
27 | */
28 | exports.vaporPressureDeficit = function(t, rh) {
29 | var vpd = t.multiply(17.27).divide(t.add(237.3)).exp()
30 | .multiply(0.6108)
31 | .multiply(rh.divide(-100).add(1));
32 |
33 | if (vpd instanceof ee.Image) {
34 | vpd = vpd.rename("VPD");
35 | }
36 |
37 | return vpd;
38 | }
39 |
40 | /**
41 | * Calculate wind velocity from vector components.
42 | * @param {ee.Image | ee.Number} u - The U component of wind.
43 | * @param {ee.Image | ee.Number} v - The V component of wind.
44 | * @returns {ee.Image | ee.Number} The wind velocity.
45 | */
46 | exports.windVelocity = function(u, v) {
47 | var wind = u.pow(2).add(v.pow(2)).sqrt();
48 |
49 | if (wind instanceof ee.Image) {
50 | wind = wind.rename("WIND");
51 | }
52 |
53 | return wind;
54 | }
55 |
56 |
57 | /**
58 | * Calculate hot-dry-windy index, Srock et al., 2018
59 | * @see {@link https://www.mdpi.com/2073-4433/9/7/279}
60 | * @param {ee.Image | ee.Number} vpd - Vapor-pressure deficit
61 | * @param {ee.Image | ee.Number} wind - Max wind speed.
62 | * @return {ee.Image | ee.Number} Hot-dry-windy index.
63 | */
64 | exports.hotDryWindyIndex = function(vpd, wind) {
65 | var hdwi = vpd.multiply(wind);
66 |
67 | if (hdwi instanceof ee.Image) {
68 | hdwi = hdwi.rename("HDWI");
69 | }
70 |
71 | return hdwi;
72 | }
--------------------------------------------------------------------------------
/cloudMasking.js:
--------------------------------------------------------------------------------
1 | // Generate a binary cloud mask from a cloud probability image
2 | exports.generateCloudMask = function (probability, probabilityThreshold) {
3 | return probability.gt(probabilityThreshold);
4 | };
5 |
6 | // Generate a binary shadow mask from a cloud mask of an image by looking for dark pixels near clouds.
7 | exports.generateShadowMask = function (
8 | img,
9 | cloudMask,
10 | shadowNIR,
11 | shadowDist,
12 | solarAzimuth,
13 | scale
14 | ) {
15 | // Identify potential shadows
16 | var darkMask = img.select("B8").lt(shadowNIR);
17 |
18 | // If no azimuth is provided, try to pull it from the image properties
19 | solarAzimuth = solarAzimuth
20 | ? solarAzimuth
21 | : ee.Number(img.get("MEAN_SOLAR_AZIMUTH_ANGLE"));
22 |
23 | var shadowAz = ee.Number(90).subtract(solarAzimuth);
24 |
25 | // Get the potential location of shadows based on cloud location
26 | var shadowProj = cloudMask
27 | .directionalDistanceTransform(shadowAz, shadowDist * 10)
28 | .reproject({ crs: img.select(0).projection(), scale: scale })
29 | .select("distance")
30 | .mask();
31 |
32 | return shadowProj.multiply(darkMask);
33 | };
34 |
35 | // Apply morphological closing to remove small groups of pixels in a binary mask
36 | exports.cleanMask = function (mask, bufferDist, scale) {
37 | var cleaned = mask.focal_max((2 * bufferDist) / scale).focal_min(2);
38 |
39 | return cleaned;
40 | };
41 |
42 | // Mask clouds and shadows in Sentinel-2 imagery using a cloud probability image.
43 | exports.probabilityCloudMask = function (
44 | img,
45 | probability,
46 | probabilityThreshold,
47 | bufferDist,
48 | scale,
49 | maskShadow,
50 | shadowNIR,
51 | shadowDist
52 | ) {
53 | probabilityThreshold = probabilityThreshold ? probabilityThreshold : 30;
54 | bufferDist = bufferDist ? bufferDist : 15;
55 | scale = scale ? scale : img.select(0).projection().nominalScale();
56 | maskShadow = maskShadow ? maskShadow : false;
57 | shadowNIR = shadowNIR ? shadowNIR : 1000;
58 | shadowDist = shadowDist ? shadowDist : 10;
59 |
60 | var cloudMask = exports.generateCloudMask(probability, probabilityThreshold);
61 |
62 | var shadowMask = exports.generateShadowMask(
63 | img,
64 | cloudMask,
65 | shadowNIR,
66 | shadowDist,
67 | scale
68 | );
69 |
70 | var cloudAndShadowMask = cloudMask.add(shadowMask).gt(0);
71 |
72 | if (maskShadow) {
73 | var mask = cloudAndShadowMask.eq(0);
74 | } else {
75 | mask = cloudMask.eq(0);
76 | }
77 |
78 | mask = exports.cleanMask(mask, bufferDist, scale);
79 |
80 | return img.mask(mask);
81 | };
82 |
83 | // A fast implementation of cloud masking that uses a simple binary cloud mask, such as the
84 | // QA60 band in Sentinel-2 imagery to mask clouds.
85 | exports.simpleCloudMask = function (img, maskBand) {
86 | maskBand = maskBand ? maskBand : "QA60";
87 |
88 | if (!img.bandNames().contains(maskBand).getInfo()) {
89 | throw 'Image does not contain a band called "' + maskBand + '".';
90 | }
91 |
92 | var cloudMask = img.select(maskBand).eq(0);
93 |
94 | return img.mask(cloudMask);
95 | };
96 |
--------------------------------------------------------------------------------
/example.js:
--------------------------------------------------------------------------------
1 | /*
2 | Example: Calculating burn severity metrics for the 2017 Oak Fire
3 | */
4 | var fire = require("users/aazuspan/geeTools:fire.js");
5 |
6 | // L8 imagery prior to the fire
7 | var prefire = ee.Image("LANDSAT/LC08/C01/T1_TOA/LC08_046031_20170628");
8 | // L8 imagery one year after the fire
9 | var postfire = ee.Image("LANDSAT/LC08/C01/T1_TOA/LC08_046031_20180701");
10 |
11 | var severity = fire.calculateBurnSeverity(prefire, postfire, "B5", "B6");
12 |
13 | Map.addLayer(
14 | severity,
15 | { min: -250, max: 600, bands: ["preNBR", "postNBR", "postNBR"] },
16 | "severity",
17 | false
18 | );
19 |
20 | /*
21 | Example: Calculating HLI from SRTM data.
22 | */
23 | var hli = require("users/aazuspan/geeTools:HLI.js");
24 | var srtm = ee.Image("CGIAR/SRTM90_V4");
25 | var h = hli.hli(srtm);
26 |
27 | Map.addLayer(h, { min: 0.5, max: 1 }, "HLI", false);
28 |
29 | /*
30 | Example: Calculating TPI and slope position
31 | */
32 | var tpi = require("users/aazuspan/geeTools:TPI.js");
33 |
34 | var aoi = ee.Geometry.Polygon(
35 | [
36 | [
37 | [-123.92382561385939, 42.39507820959633],
38 | [-123.92382561385939, 41.57642883612384],
39 | [-122.83343254745314, 41.57642883612384],
40 | [-122.83343254745314, 42.39507820959633],
41 | ],
42 | ],
43 | null,
44 | false
45 | );
46 |
47 | // Calculate slope in degrees
48 | var slope = ee.Terrain.slope(srtm);
49 |
50 | // Calculate a TPI image using a 300m kernel
51 | var tpi300 = tpi.tpi(srtm, 300, "square", "meters");
52 |
53 | // Reclassify TPI to discrete slope positions
54 | var slopePosition300 = tpi.slopePosition(tpi300, slope, null, aoi, 100, 1e12);
55 |
56 | Map.addLayer(slopePosition300, { min: 1, max: 6 }, "Slope Position", false);
57 |
58 | /*
59 | Example: Applying radiometric correction
60 | */
61 |
62 | var radCor = require("users/aazuspan/geeTools:radiometricCorrection.js");
63 |
64 | // Identify a reference dark object, such as deep water
65 | var darkObject = ee.Geometry.Polygon(
66 | [
67 | [
68 | [-124.74266276966597, 42.12268590007055],
69 | [-124.74266276966597, 41.93396768286303],
70 | [-124.52705608021284, 41.93396768286303],
71 | [-124.52705608021284, 42.12268590007055],
72 | ],
73 | ],
74 | null,
75 | false
76 | );
77 |
78 | // Use Dark Object Subtraction to correct for atmospheric distortion
79 | var prefireDOS = radCor.darkObjectSubtraction(prefire, darkObject, 30, 1e13);
80 | var postfireDOS = radCor.darkObjectSubtraction(postfire, darkObject, 30, 1e13);
81 |
82 | Map.addLayer(
83 | prefireDOS,
84 | { min: 0, max: 0.4, bands: ["B5", "B4", "B3"] },
85 | "Prefire DOS",
86 | false
87 | );
88 | Map.addLayer(
89 | postfireDOS,
90 | { min: 0, max: 0.4, bands: ["B5", "B4", "B3"] },
91 | "Postfire DOS",
92 | false
93 | );
94 |
95 | // Identify pseudo-invariant features between prefire and postfire images; in
96 | // this case, ocean and a building.
97 | var PIF = ee.Geometry.MultiPolygon([
98 | [
99 | [
100 | [-124.73859734350975, 41.90979183965181],
101 | [-124.73688072974022, 41.88551473447749],
102 | [-124.71834130102928, 41.88628152101927],
103 | [-124.7216028671914, 41.91426293134146],
104 | ],
105 | ],
106 | [
107 | [
108 | [-122.87238706850988, 42.428688503225544],
109 | [-122.87242998385412, 42.4279599378424],
110 | [-122.8702842166422, 42.4279124224146],
111 | [-122.87024130129797, 42.42865682664584],
112 | ],
113 | ],
114 | ]);
115 |
116 | // Use pseudo-invariant features to match the histogram of postfire imagery to
117 | // prefire imagery. All bands within each image must have the same projection,
118 | // so a subset of bands are selected.
119 | var postfireMatch = radCor.linearHistogramMatch(
120 | postfire.select(["B5", "B4", "B3", "B2"]),
121 | prefire.select(["B5", "B4", "B3", "B2"]),
122 | PIF
123 | );
124 |
125 | Map.addLayer(
126 | postfireMatch,
127 | { min: 0, max: 0.4, bands: ["B5", "B4", "B3"] },
128 | "Postfire Matched",
129 | false
130 | );
131 |
132 | /*
133 | Example: Cloud masking Sentinel-2 imagery
134 | */
135 |
136 | var cloudMasking = require("users/aazuspan/geeTools:cloudMasking.js");
137 |
138 | // Load a Sentinel-2 image (1C or 2A)
139 | var s2 = ee.Image("COPERNICUS/S2/20190113T190741_20190113T190736_T10TEK");
140 | // Load the corresponding cloud probability image
141 | var prob = ee.Image(
142 | "COPERNICUS/S2_CLOUD_PROBABILITY/20190113T190741_20190113T190736_T10TEK"
143 | );
144 |
145 | var cloudMasked = cloudMasking.probabilityCloudMask(s2, prob);
146 |
147 | Map.addLayer(s2, { bands: ["B4", "B3", "B2"], min: 0, max: 2000 }, "S2", false);
148 | Map.addLayer(
149 | cloudMasked,
150 | { bands: ["B4", "B3", "B2"], min: 0, max: 2000 },
151 | "S2 masked",
152 | false
153 | );
154 |
155 | /*
156 | Example: Fire perimeter detection
157 | */
158 |
159 | // Select an area near the 2020 Lionshead and Beachie Creek fires
160 | var aoi = ee.Geometry.Point([-122.12284375769744, 44.729350689066244]).buffer(
161 | 50000
162 | );
163 |
164 | // Select a date range to generate daily fire perimeters for
165 | var start = "2020-09-06";
166 | var end = "2020-09-09";
167 |
168 | // Use GOES imagery to generate a daily fire area ImageCollection
169 | var collection = fire.periodicFireBoundaries(start, end, aoi, true);
170 | // Convert the ImageCollection to a FeatureCollection of daily fire perimeters
171 | var perimeters = fire.vectorizeBoundaryCollection(
172 | collection,
173 | 250,
174 | aoi,
175 | 1e12,
176 | true,
177 | 500
178 | );
179 |
180 | Map.addLayer(perimeters, {}, "Fire perimeters", false);
181 |
--------------------------------------------------------------------------------
/fire.js:
--------------------------------------------------------------------------------
1 | var utils = require("users/aazuspan/geeTools:utils.js");
2 |
3 | /**
4 | * Calculate various burn severity metrics between pre- and post-fire imagery.
5 | * @param {ee.Image} pre A multispectral prefire image.
6 | * @param {ee.Image} post A multispectral postfire image.
7 | * @param {string} NIR The name of the NIR band in both images.
8 | * @param {string} SWIR The name of the SWIR band in both images.
9 | * @return {ee.Image} A multiband image containing pre- and post-fire NBR,
10 | * dNBR, RdNBR, estimated basal area mortality, and refugia status as bands.
11 | */
12 | exports.calculateBurnSeverity = function (pre, post, NIR, SWIR) {
13 | // Normalized burn ratio
14 | var preNBR = pre
15 | .normalizedDifference([NIR, SWIR])
16 | .multiply(1000)
17 | .rename("preNBR");
18 | var postNBR = post
19 | .normalizedDifference([NIR, SWIR])
20 | .multiply(1000)
21 | .rename("postNBR");
22 |
23 | // Delta normalized burn ratio
24 | var dNBR = preNBR.subtract(postNBR).rename("dNBR");
25 |
26 | // Relativized dNBR, Miller & Thode 2007
27 | var RdNBR = dNBR.divide(preNBR.divide(1000).abs().sqrt()).rename("RdNBR");
28 |
29 | // Basal area mortality regression equation, Reilly et. al. 2017
30 | var basalMortality = RdNBR.multiply(1135360)
31 | .add(-119487011)
32 | .sqrt()
33 | .multiply(0.00003938)
34 | .add(-0.22845617)
35 | .rename("percentMortality");
36 |
37 | // Refugia are areas with < 10% basal area mortality, Meigs & Krawchuck 2018
38 | var refugia = ee.Image(1).where(basalMortality.gt(0.1), 0).rename("refugia");
39 |
40 | var severityMetrics = preNBR
41 | .addBands(postNBR)
42 | .addBands(dNBR)
43 | .addBands(RdNBR)
44 | .addBands(basalMortality)
45 | .addBands(refugia);
46 |
47 | return severityMetrics;
48 | };
49 |
50 | /**
51 | * Generate a single image mask of active fire between a start and end time using GOES16 and GOES17 data.
52 | * @param {ee.Date} start The starting time.
53 | * @param {ee.Date} end The ending time.
54 | * @param {ee.Geometry} region The area to search for fire perimeters.
55 | * @param {boolean} smooth If true, a majority filter will be used to smooth the low-resolution pixels.
56 | * @param {ee.Kernel} smoothKernel If smoothing, the kernel used to perform the majority filter. If null, a 2000 meter
57 | * normalized circular kernel will be used.
58 | * @return {ee.Image} A binary mask where 1 is active fire within the time period.
59 | */
60 | exports.periodFireBoundary = function (
61 | start,
62 | end,
63 | region,
64 | smooth,
65 | smoothKernel
66 | ) {
67 | smoothKernel = smoothKernel
68 | ? smoothKernel
69 | : ee.Kernel.circle(2000, "meters", true);
70 |
71 | start = ee.Date(start);
72 | end = ee.Date(end);
73 |
74 | var goes16 = ee.ImageCollection("NOAA/GOES/16/FDCF");
75 | var goes17 = ee.ImageCollection("NOAA/GOES/17/FDCF");
76 |
77 | // Generate boundaries from GOES16 and GOES17 separately
78 | var boundaries = ee.List([goes16, goes17]).map(function (collection) {
79 | var filtered = ee
80 | .ImageCollection(collection)
81 | .filterDate(start, end)
82 | .filterBounds(region);
83 |
84 | // Remap mask to binary fire by selecting good quality fire pixels
85 | var fireQuality = filtered.select("DQF");
86 | // Take the minimum DQF value where the minimum (0) represents good quality fire signal. This will cause false
87 | // positives for each data source, but these will be removed when data sources are combined. Other reducers have
88 | // unacceptably high false negative rates (eg. max) and/or are very sensitive to the timeDelta (eg. median or mode).
89 | var fireMask = fireQuality.reduce(ee.Reducer.min()).eq(0);
90 |
91 | return fireMask;
92 | });
93 | // Combine GOES16 and GOES17 into one image. Take the min to require
94 | // agreement between the data sources and minimize false positives.
95 | var combined = ee.ImageCollection(boundaries).reduce(ee.Reducer.min());
96 |
97 | if (smooth === true) {
98 | combined = combined.reduceNeighborhood({
99 | reducer: ee.Reducer.mode(),
100 | kernel: smoothKernel,
101 | });
102 | }
103 |
104 | // Mask and store the date as a property
105 | combined = combined.selfMask().rename("fire_mask");
106 |
107 | combined = setImageMetadata(combined, start, end);
108 |
109 | return combined;
110 | };
111 |
112 | /**
113 | * Add a binary mask to the last image in a list of binary masks. Used for iterating over an image collection.
114 | * @param {ee.Image} next A binary mask to accumulate with past masks.
115 | * @param {ee.List of ee.Image} list A list of past masks.
116 | * @return {ee.List of ee.Image} The input list with the next accumulated mask added.
117 | */
118 | var accumulateMask = function (next, list) {
119 | // Select the last image of the current collection
120 | var previous = ee.Image(ee.List(list).get(-1)).unmask();
121 | next = next.unmask();
122 |
123 | // Add the previous presence to the current presence
124 | var accumulated = next.add(previous).gt(0);
125 | accumulated = accumulated.selfMask();
126 |
127 | // Because images are accumulated over the time series, they will all have the
128 | // same start date.
129 | var start = ee.Image(ee.List(list).get(0)).get("start_date");
130 | var end = next.get("end_date");
131 |
132 | accumulated = setImageMetadata(accumulated, start, end);
133 |
134 | return ee.List(list).add(accumulated);
135 | };
136 |
137 | /**
138 | * Set the title and date metadata for a fire mask image. Image titles use the
139 | * end date so that accumulated images have unique titles.
140 | * @param {ee.Image} img A binary fire mask.
141 | * @param {ee.Date} startDate The starting date for the fire mask.
142 | * @return {ee.Image} The binary fire mask with an ID and dates set.
143 | */
144 | var setImageMetadata = function (img, startDate, endDate) {
145 | var dateString = ee.Date(endDate).format("yyyy_MM_dd_HH:mm:ss");
146 | var imgName = ee.String("FireMask/").cat(dateString);
147 |
148 | return img.set(
149 | "system:id",
150 | imgName,
151 | "start_date",
152 | startDate,
153 | "end_date",
154 | endDate
155 | );
156 | };
157 |
158 | /**
159 | * Generate a collection of image masks of active fire at a regular interval between a start and end time using GOES16
160 | * and GOES17 data. Masks can represent either instantaneous fire area within each interval or cumulative fire area
161 | * between the start time and the current interval.
162 | * @param {ee.Date} start The starting time.
163 | * @param {ee.Date} end The ending time.
164 | * @param {ee.Geometry} region The area to search for fire perimeters.
165 | * @param {boolean} smooth If true, a majority filter will be used to smooth the low-resolution pixels.
166 | * @param {ee.Kernel} smoothKernel If smoothing, the kernel used to perform the majority filter. If null, a 2000 meter
167 | * normalized circular kernel will be used.
168 | * @param {boolean} cumulative If true, each mask in the collection will represent cumulative area burned since the
169 | * start time. If false, each mask in the collection will represent only the area burned within that time period.
170 | * @param {number} timeDelta The length of each interval, in hours, to generate fire boundaries for.
171 | * @return {ee.ImageCollection} A collection of binary masks where 1 is active fire or cumulative area burned within
172 | * each time period.
173 | */
174 | exports.periodicFireBoundaries = function (
175 | start,
176 | end,
177 | region,
178 | optionalParameters
179 | ) {
180 | // Default parameters
181 | var params = {
182 | smooth: false,
183 | smoothKernel: ee.Kernel.circle(2000, "meters", true),
184 | timeDelta: 24,
185 | cumulative: false,
186 | };
187 |
188 | // Swap default parameters for user-defined parameters
189 | params = utils.updateParameters(params, optionalParameters);
190 |
191 | // Convert time delta in hours to milliseconds
192 | var msDelta = params.timeDelta * 3.6e6;
193 |
194 | // Millisecond epoch time of each day in the time series
195 | var periodList = ee.List.sequence(
196 | ee.Date(start).millis(),
197 | ee.Date(end).millis(),
198 | msDelta
199 | );
200 |
201 | var periodCollection = ee.ImageCollection.fromImages(
202 | periodList.map(function (time) {
203 | var start = time;
204 | var end = ee.Date(time).advance(params.timeDelta, "hours");
205 |
206 | return exports.periodFireBoundary(
207 | start,
208 | end,
209 | region,
210 | params.smooth,
211 | params.smoothKernel,
212 | params.timeDelta
213 | );
214 | })
215 | );
216 |
217 | if (params.cumulative === true) {
218 | // Create a placeholder element
219 | var first = ee.List([
220 | ee
221 | .Image(0)
222 | .rename("fire_mask")
223 | .int()
224 | // Store the start date since it will be used for all accumulated images.
225 | .set("start_date", ee.Date(start)),
226 | ]);
227 |
228 | // Iteratively add all previous boundaries to each boundary to get cumulative area burned for each time period
229 | var cumulativeBoundary = ee.List(
230 | periodCollection.iterate(accumulateMask, first)
231 | );
232 | // Remove the first placeholder element
233 | cumulativeBoundary = ee.ImageCollection(cumulativeBoundary.slice(1));
234 | periodCollection = cumulativeBoundary;
235 | }
236 |
237 | var dateString = ee.Date(end).format("yyyy_MM_dd_HH:mm:ss");
238 | var collectionName = ee.String("FireMaskCollection/").cat(dateString);
239 |
240 | periodCollection = periodCollection.set(
241 | "system:id",
242 | collectionName,
243 | "start_date",
244 | start,
245 | "end_date",
246 | end,
247 | "cumulative",
248 | params.cumulative,
249 | "smoothed",
250 | params.smooth,
251 | "region",
252 | region,
253 | "time_delta",
254 | params.timeDelta
255 | );
256 |
257 | return periodCollection;
258 | };
259 |
260 | /**
261 | * Convert a binary mask image into a Feature Collection. The date field from the image will be transferred to the
262 | * features.
263 | * @param {ee.Image} img A binary mask to convert into polygons.
264 | * @param {number} scale The desired pixel size, in meters, of the input image.
265 | * @param {ee.Geometry} region The area to containing the image to generate polygons from.
266 | * @param {number, default 1e13} maxPixels The maximum number of pixels to sample when converting the image to vector.
267 | * @param {boolean, default false} simplify If true, ee.Geometry.simplify() will be run on the vectorized boundary to
268 | * remove stairstepping.
269 | * @param {number} maxError If simplifying, the maximum error introduced by simplification, in meters. Higher values
270 | * will lead to greater simplification.
271 | * @return {ee.FeatureCollection} A collection of polygons representing the binary mask.
272 | */
273 | exports.vectorizeBoundary = function (
274 | img,
275 | scale,
276 | region,
277 | maxPixels,
278 | simplify,
279 | maxError
280 | ) {
281 | maxPixels = maxPixels ? maxPixels : 1e13;
282 |
283 | var poly = img.reduceToVectors({
284 | scale: scale,
285 | maxPixels: maxPixels,
286 | geometry: region,
287 | });
288 |
289 | if (simplify === true) {
290 | poly = ee.FeatureCollection(poly).map(function (feature) {
291 | return ee.Feature(feature).simplify(ee.Number(maxError));
292 | });
293 | }
294 | // Convert the FeatureCollection to a Feature
295 | poly = ee.Feature(poly.geometry());
296 | poly = poly.set({ start_date: img.get("start_date"), end_date: img.get("end_date") });
297 | return poly;
298 | };
299 |
300 | /**
301 | * Convert a collection of binary mask images into a Feature Collection. The date field from the image will be
302 | * transferred from each image to each corresponding feature.
303 | * @param {ee.ImageCollection} collection A collection of binary masks to convert into polygons.
304 | * @param {number} scale The desired pixel size, in meters, of the input image.
305 | * @param {ee.Geometry} region The area to containing the images to generate polygons from.
306 | * @param {number, default 1e13} maxPixels The maximum number of pixels to sample when converting the images to vectors.
307 | * @param {boolean, default false} simplify If true, ee.Geometry.simplify() will be run on the vectorized boundaries to
308 | * remove stairstepping.
309 | * @param {number} maxError If simplifying, the maximum error introduced by simplification, in meters. Higher values
310 | * will lead to greater simplification.
311 | * @return {ee.FeatureCollection} A collection of polygons representing the binary masks.
312 | */
313 | exports.vectorizeBoundaryCollection = function (
314 | collection,
315 | scale,
316 | region,
317 | maxPixels,
318 | simplify,
319 | maxError
320 | ) {
321 | maxPixels = maxPixels ? maxPixels : 1e13;
322 |
323 | var collectionPoly = collection.map(function (img) {
324 | return exports.vectorizeBoundary(
325 | img,
326 | scale,
327 | region,
328 | maxPixels,
329 | simplify,
330 | maxError
331 | );
332 | });
333 | return ee.FeatureCollection(collectionPoly);
334 | };
335 |
--------------------------------------------------------------------------------
/getNearestImage.js:
--------------------------------------------------------------------------------
1 | // Chooose the nearest image from a collection to a given date.
2 | exports.getNearestImage = function (imageCollection, targetDate) {
3 | var beforeImage = getNearestBeforeImage(imageCollection, targetDate);
4 | var afterImage = getNearestAfterImage(imageCollection, targetDate);
5 |
6 | // Creating a new collection and sorting allows for async operations that are MUCH faster than comparing time deltas synchronously
7 | var nearImages = ee.ImageCollection([beforeImage, afterImage]);
8 | nearImages = nearImages.sort("DATE_ACQUIRED");
9 | return nearImages.first();
10 | };
11 |
12 | // Choose the nearest image from a collection after a given date
13 | function getNearestAfterImage(imageCollection, targetDate) {
14 | var filteredCollection = imageCollection
15 | .filterDate(targetDate, targetDate.advance(999, "year"))
16 | .sort("DATE_ACQUIRED");
17 | return filteredCollection.first();
18 | }
19 |
20 | // Choose the nearest image from a collection before a given date
21 | function getNearestBeforeImage(imageCollection, targetDate) {
22 | var filteredCollection = imageCollection
23 | .filterDate(targetDate.advance(-999, "year"), targetDate)
24 | .sort("DATE_ACQUIRED", false);
25 | return filteredCollection.first();
26 | }
27 |
--------------------------------------------------------------------------------
/radiometricCorrection.js:
--------------------------------------------------------------------------------
1 | var utils = require("users/aazuspan/geeTools:utils.js");
2 |
3 | /**
4 | * Apply band-wise radiometric correction to remote sensing imagery using the
5 | * dark object subtraction (DOS) method.
6 | * @param {ee.Image} img The image to apply correction to.
7 | * @param {ee.Feature | ee.FeatureCollection} obj The location or extent of
8 | * the dark object within the image.
9 | * @param {ee.Number} scale The scale to calculate dark object statistics at.
10 | * @param {ee.Number} maxPixels Maximum number of pixels used to calculate
11 | * statistics.
12 | * @return {ee.Image} The radiometrically corrected image.
13 | */
14 | exports.darkObjectSubtraction = function (img, obj, scale, maxPixels) {
15 | var offset = exports.reduceImage(
16 | img,
17 | ee.Reducer.mean(),
18 | obj,
19 | scale,
20 | maxPixels
21 | );
22 |
23 | var imgAdj = img.subtract(offset);
24 |
25 | return imgAdj;
26 | };
27 |
28 | /**
29 | * Rescale the mean and standard deviation of a target image to match a
30 | * reference image. This can be used to implement pseudo-invariant feature
31 | * (PIF) normalization if an appropriate geometry is passed.
32 | * @param {ee.Image} targetImage An image to rescale.
33 | * @param {ee.Image} referenceImage An image to rescale towards.
34 | * @param {ee.Geometry} geometry The region to generate image statistics over.
35 | * @param {ee.Number} scale The scale to generate image statistics at.
36 | * @param {ee.Number} maxPixels Maximum number of pixels used to calculate
37 | * statistics.
38 | * @return {ee.Image} A rescaled version of targetImage.
39 | */
40 | exports.linearHistogramMatch = function (
41 | targetImage,
42 | referenceImage,
43 | geometry,
44 | scale,
45 | maxPixels
46 | ) {
47 | var offsetTarget = exports.reduceImage(
48 | targetImage,
49 | ee.Reducer.mean(),
50 | geometry,
51 | scale,
52 | maxPixels
53 | );
54 | var offset = exports.reduceImage(
55 | referenceImage,
56 | ee.Reducer.mean(),
57 | geometry,
58 | scale,
59 | maxPixels
60 | );
61 | var rescale = exports
62 | .reduceImage(
63 | referenceImage,
64 | ee.Reducer.stdDev(),
65 | geometry,
66 | scale,
67 | maxPixels
68 | )
69 | .divide(
70 | exports.reduceImage(
71 | targetImage,
72 | ee.Reducer.stdDev(),
73 | geometry,
74 | scale,
75 | maxPixels
76 | )
77 | );
78 |
79 | var rescaledTarget = targetImage
80 | .subtract(offsetTarget)
81 | .multiply(rescale)
82 | .add(offset);
83 | return rescaledTarget;
84 | };
85 |
86 | /**
87 | * Create a constant image where each band represents the reduced value of the
88 | * corresponding band of the input image.
89 | * @param {ee.Image} img The input image to calculate reduced values for.
90 | * @param {ee.Reducer} reducer The reducer to apply to the image, such as
91 | * ee.Reducer.min()
92 | * @param {ee.Geometry} geometry The region to generate image statistics over.
93 | * Defaults to the geometry of the input image.
94 | * @param {ee.Number} scale The scale to generate image statistics at. Defaults
95 | * to the nominal scale of the input image.
96 | * @param {ee.Number} maxPixels Maximum number of pixels used to calculate
97 | * statistics.
98 | * @return {ee.Image} An image with the same number of bands as the input
99 | * image, where each band is a constant value of the reduced value of the
100 | * corresponding band of the input image.
101 | */
102 | exports.reduceImage = function (img, reducer, geometry, scale, maxPixels) {
103 | if (utils.isMissing(geometry)) {
104 | geometry = img.geometry();
105 | }
106 |
107 | if (utils.isMissing(scale)) {
108 | scale = img.projection().nominalScale();
109 | }
110 |
111 | if (utils.isMissing(maxPixels)) {
112 | maxPixels = 1e12;
113 | }
114 |
115 | // Calculate the reduced image value(s)
116 | var imgReducedVal = img.reduceRegion({
117 | reducer: reducer,
118 | geometry: geometry,
119 | scale: scale,
120 | maxPixels: maxPixels,
121 | });
122 |
123 | var imgReduced = imgReducedVal.toImage(img.bandNames());
124 | return imgReduced;
125 | };
126 |
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/test.js:
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1 | var should = require("users/aazuspan/should:test");
2 | var climateTools = require("users/aazuspan/geeTools:climate.js");
3 |
4 |
5 | should.equal(climateTools.hotDryWindyIndex(ee.Number(10), ee.Number(10)), 100, "Calculate HDWI");
6 | should.equal(climateTools.windVelocity(ee.Number(-3), ee.Number(4)), 5, "Calculate wind velocity");
7 |
8 | // should-test needs an almost equal test. Until then, we'll just round the result to the nearest int.
9 | should.equal(climateTools.vaporPressureDeficit(ee.Number(27), ee.Number(18)).round(), 3, "Calculate VPD");
10 | should.equal(climateTools.relativeHumidity(ee.Number(0.0127), ee.Number(90000), ee.Number(25)).round(), 58, "Calculate RH");
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/utils.js:
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1 | /**
2 | * Convert degrees to radians.
3 | * @param {ee.Number or ee.Image} deg An angle in degrees
4 | * @return {ee.Number or ee.Image} The angle in radians
5 | */
6 | exports.deg2rad = function (deg) {
7 | var coeff = 180 / Math.PI;
8 |
9 | return deg.divide(coeff);
10 | };
11 |
12 | /**
13 | * Check if an object has a value. Helpful for finding missing arguments.
14 | * @param {object} x Any object
15 | * @return {boolean} True if the object is missing, false if it is not.
16 | */
17 | exports.isMissing = function (x) {
18 | if (x === undefined || x === null) {
19 | return true;
20 | }
21 | return false;
22 | };
23 |
24 | /**
25 | * Check if an argument matches a list of choices. Return the argument if so,
26 | * throw an error if not.
27 | * @param {Object} arg An argument or arguments to test against choices.
28 | * @param {array} choices An array of choices that arg is allowed to take.
29 | * @param {bool, default false} allowSeveral If true, all args will be checked
30 | * against choices and each must be valid. If false, arg must be a single
31 | * object that is in choices.
32 | * @return {Object} If arg was in choices, arg will be returned. If not, an
33 | * error will be thrown.
34 | */
35 | exports.matchArg = function (arg, choices, allowSeveral) {
36 | allowSeveral = allowSeveral | false;
37 |
38 | if (!Array.isArray(arg)) {
39 | if (exports.itemInList(arg, choices)) {
40 | return arg;
41 | }
42 | } else if (allowSeveral === 1) {
43 | if (
44 | arg.every(function (item) {
45 | return exports.itemInList(item, choices);
46 | })
47 | ) {
48 | return arg;
49 | }
50 | }
51 |
52 | throw 'Argument "' + arg + '" must be in "' + choices + '"';
53 | };
54 |
55 | /**
56 | * Check if an item is in a list.
57 | * @param {Object} item
58 | * @param {array} list
59 | * @return {bool} True if item is in list. False if not.
60 | */
61 | exports.itemInList = function (item, list) {
62 | if (list.indexOf(item) >= 0) {
63 | return true;
64 | }
65 | return false;
66 | };
67 |
68 | /**
69 | * Swap given parameters into a dictionary of default parameters. Given parameters can be null or false and will still
70 | * be swapped. Given parameters not included in the default set will be added, but I'm not sure why you'd want to do
71 | * that.
72 | * @param {Object} def A dictionary of default parameters.
73 | * @param {Object} given A dictionary of given parameters to substitue for defaults.
74 | * @return {Object} The default dictionary with values from the given dictionary.
75 | */
76 | exports.updateParameters = function (def, given) {
77 | if (given) {
78 | for (var prop in given) {
79 | def[prop] = given[prop];
80 | }
81 | }
82 | return def;
83 | };
84 |
85 | /**
86 | * Combine a list of images into a single multi-band image. This is a convenience function over repeatedly calling
87 | * addBands for each image you want to combine.
88 | * @param {ee.List} imgList A list of images to combine. Images can be single or multiband.
89 | * @param {Object} [optionalParameters] A dictionary of optional parameters to override defaults.
90 | * @param {boolean, default true} [optionalParameters.prefix] If true, all band names will be prefixed with the list
91 | * index of the image it came from. This allows combining images with identical band names. If false, original band
92 | * names will be kept. If there are duplicate band names, an error will be thrown.
93 | * @param {ee.Dictionary, default null} [optionalParameters.props] Properties to store in the combined image. If null,
94 | * properties will be taken from the first image in imgList and the result will be identical to using addBands.
95 | * @return {ee.Image} An image with the bands of all images in imgList
96 | */
97 | exports.combineImages = function (imgList, optionalParameters) {
98 | var first = ee.Image(ee.List(imgList).get(0));
99 |
100 | // Default parameters
101 | var params = {
102 | prefix: true,
103 | props: first.toDictionary(first.propertyNames()),
104 | };
105 |
106 | params = exports.updateParameters(params, optionalParameters);
107 |
108 | // Convert the list to a collection and collapse the collection into a multiband image.
109 | // Rename bands to match original band names.
110 | var combined = ee.ImageCollection
111 | // Convert the image list to a collection
112 | .fromImages(imgList)
113 | // Convert the collection to a multiband image
114 | .toBands()
115 | // Store properties
116 | .set(params.props);
117 |
118 | if (params.prefix === false) {
119 | // Grab a 1D list of original band names
120 | var bandNames = ee
121 | .List(
122 | imgList.map(function (img) {
123 | return img.bandNames();
124 | })
125 | )
126 | .flatten();
127 | combined = combined.rename(bandNames);
128 | }
129 |
130 | return combined;
131 | };
132 |
133 | /**
134 | * Perform band-wise normalization on an image to convert values to range 0 - 1.
135 | * @param {ee.Image} img An image.
136 | * @param {object} [optionalParameters] A dictionary of optional parameters to override defaults.
137 | * @param {number} [optionalParameters.scale] The scale, in image units, to calculate image statistics at.
138 | * @param {ee.Geometry} [optionalParameters.region] The area to calculate image statistics over.
139 | * @param {number, default 1e13} [optionalParameters.maxPixels] The maximum number of pixels to sample when calculating
140 | * image statistics.
141 | * @return {ee.Image} The input image with all bands rescaled between 0 and 1.
142 | */
143 | exports.normalizeImage = function (img, optionalParameters) {
144 | var params = {
145 | region: null,
146 | scale: null,
147 | maxPixels: 1e13,
148 | };
149 |
150 | params = exports.updateParameters(params, optionalParameters);
151 |
152 | var min = img
153 | .reduceRegion({
154 | reducer: ee.Reducer.min(),
155 | geometry: params.region,
156 | scale: params.scale,
157 | maxPixels: params.maxPixels,
158 | })
159 | .toImage(img.bandNames());
160 |
161 | var max = img
162 | .reduceRegion({
163 | reducer: ee.Reducer.max(),
164 | geometry: params.region,
165 | scale: params.scale,
166 | maxPixels: params.maxPixels,
167 | })
168 | .toImage(img.bandNames());
169 |
170 | return img.subtract(min).divide(max.subtract(min));
171 | };
172 |
173 | /**
174 | * Perform band-wise cyclic encoding with a sine or cosine transformation and rescale to range 0 - 1.
175 | * @param {ee.Image} img An image with cyclic data.
176 | * @param {object} [optionalParameters] A dictionary of optional parameters to override defaults.
177 | * @param {string} [optionalParameters.transform] The encoding transformation to apply, either "sin" or "cos". Default
178 | * transformation is "sin".
179 | * @param {number} [optionalParameters.scale] The scale, in image units, to calculate image statistics at.
180 | * @param {ee.Geometry} [optionalParameters.region] The area to calculate image statistics over.
181 | * @param {number, default 1e13} [optionalParameters.maxPixels] The maximum number of pixels to sample when calculating
182 | * image statistics.
183 | * @return {ee.Image} The input image with all bands sine or cosine transformed and rescaled between 0 and 1.
184 | */
185 | exports.cyclicEncode = function (img, optionalParameters) {
186 | var params = {
187 | transform: "sin",
188 | region: null,
189 | scale: null,
190 | maxPixels: 1e13,
191 | };
192 |
193 | params = exports.updateParameters(params, optionalParameters);
194 |
195 | var max = img
196 | .reduceRegion({
197 | reducer: ee.Reducer.max(),
198 | geometry: params.region,
199 | scale: params.scale,
200 | maxPixels: params.maxPixels,
201 | })
202 | .toImage(img.bandNames());
203 |
204 | var rescale = img.multiply(Math.PI).multiply(2).divide(max);
205 |
206 | var transform = ee.String(params.transform).toLowerCase().getInfo();
207 |
208 | switch (transform) {
209 | case "cos":
210 | return rescale.cos();
211 | case "sin":
212 | return rescale.sin();
213 | default:
214 | throw 'Bad transform: "' + transform + '" not in [sin, cos].';
215 | }
216 | };
217 |
218 | /**
219 | * Perform band-wise stretching of an input image using a list of stretch values. For example, stretching an RGB image
220 | * with a stretch list [1, 2, 1] would double values of the green channel
221 | * @param {ee.Image} img A multiband image to stretch.
222 | * @param {list} stretch A list of stretch factors to apply band-wise to the image. The number of stretch values must
223 | * be equal to the number of image bands.
224 | * @returns An image with band values stretched.
225 | */
226 | exports.bandStretch = function (img, stretch) {
227 | if (ee.List(stretch).size().neq(img.bandNames().size()).getInfo()) {
228 | throw "The number of stretch values must match the number of image bands.";
229 | }
230 |
231 | var stretchBands = ee
232 | .ImageCollection(
233 | stretch.map(function (val) {
234 | return ee.Image.constant(val);
235 | })
236 | )
237 | .toBands();
238 |
239 | return img.multiply(stretchBands);
240 | };
241 |
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