├── .gitignore ├── LICENSE ├── README.txt ├── bin └── linux │ └── fseq ├── lib └── commons-cli-1.1.jar ├── mapviewToBed.pl └── src └── edu └── duke └── igsp └── gkde ├── KDEChromosome.java ├── Main.java ├── Util.java ├── background ├── BffReader.java ├── IffReader.java └── WigChromosome.java └── format ├── BedDensityWriter.java ├── BedReader.java ├── DensityWriter.java ├── NpfDensityWriter.java └── WiggleDensityWriter.java /.gitignore: -------------------------------------------------------------------------------- 1 | #all tilde directories are generated on the fly 2 | *~ 3 | -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/aboyle/F-seq/HEAD/LICENSE -------------------------------------------------------------------------------- /README.txt: -------------------------------------------------------------------------------- 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