├── HLAN ├── HAN_model_dynamic.py ├── HAN_train.py ├── HLAN-architecture.PNG ├── data_util_gensim.py ├── demo_HLAN_viz.ipynb ├── evaluation_setup.py ├── model_predict_util.py └── multi_level_eval.py ├── README.md ├── cache_vocabulary_label_pik └── README.md ├── checkpoints └── README.md ├── datasets ├── README.md └── plot-label-figure.ipynb ├── embeddings ├── readme.md ├── train_code_embedding.py └── train_word_embedding.py ├── explanations └── README.md ├── knowledge_bases ├── README.md ├── icd9_graph_desc.json └── kb-icd-sub.csv ├── requirements.txt └── results-HealTAC 2020 ├── BERT results ├── README.md ├── bert-50-ce.csv ├── bert-50.csv ├── bert-full-ce.csv └── bert-full.csv ├── Bi-GRU results ├── README.md ├── bigru_result_50.csv ├── bigru_result_50.xlsx ├── bigru_result_50_ce.csv ├── bigru_result_50_ce.xlsx ├── bigru_result_full.csv ├── bigru_result_full.xlsx ├── bigru_result_full_ce.csv └── bigru_result_full_ce.xlsx ├── CNN results ├── README.md ├── cnn_result_50.csv ├── cnn_result_50.xlsx ├── cnn_result_ce_50.csv ├── cnn_result_ce_50.xlsx ├── cnn_result_ce_full.csv ├── cnn_result_ce_full.xlsx ├── cnn_result_full.csv └── cnn_result_full.xlsx ├── CNN+att results ├── README.md ├── cnn+att_ce_result_50.csv ├── cnn+att_ce_result_50.xlsx ├── cnn+att_ce_result_full.csv ├── cnn+att_ce_result_full.xlsx ├── cnn+att_result_50.csv ├── cnn+att_result_50.xlsx ├── cnn+att_result_full.csv └── cnn+att_result_full.xlsx ├── label-embedding-init-figure.PNG ├── mimic-iii-50 results.JPG ├── mimic-iii-results.JPG └── readme.md /HLAN/HAN_model_dynamic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/acadTags/Explainable-Automated-Medical-Coding/HEAD/HLAN/HAN_model_dynamic.py -------------------------------------------------------------------------------- /HLAN/HAN_train.py: -------------------------------------------------------------------------------- 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