├── .github └── workflows │ ├── build.yml │ ├── docs.yml │ ├── merge-tests.yml │ └── tests.yml ├── .gitignore ├── .pre-commit-config.yaml ├── LICENSE ├── MANIFEST.in ├── README.md ├── docsrc ├── .nojekyll ├── Makefile ├── make.bat └── source │ ├── _static │ └── bads-cartoon.png │ ├── about_us.rst │ ├── api │ ├── advanced_docs.rst │ ├── classes │ │ ├── bads.rst │ │ ├── classes.rst │ │ ├── function_logger.rst │ │ ├── iteration_history.rst │ │ ├── optimize_result.rst │ │ ├── options.rst │ │ ├── parameter_transformer.rst │ │ └── timer.rst │ ├── functions │ │ ├── acquisition_functions.rst │ │ ├── decorators.rst │ │ ├── functions.rst │ │ └── get_hpd.rst │ └── options │ │ └── bads_options.rst │ ├── conf.py │ ├── css │ └── custom.css │ ├── development.rst │ ├── documentation.rst │ ├── examples.rst │ ├── index.rst │ ├── installation.rst │ └── quickstart.rst ├── environment.yml ├── examples ├── pybads_example_1_basic_usage.ipynb ├── pybads_example_2_nonbox_constraints.ipynb ├── pybads_example_3_noisy_objective.ipynb ├── pybads_example_4_user_provided_noise.ipynb ├── pybads_example_5_extended_usage.ipynb └── scripts │ ├── pybads_example_1_basic_usage.py │ ├── pybads_example_2_nonbox_constraints.py │ ├── pybads_example_3_noisy_objective.py │ ├── pybads_example_4_user_provided_noise.py │ └── pybads_example_5_extended_usage.py ├── pybads ├── __init__.py ├── __main__.py ├── acquisition_functions │ ├── __init__.py │ └── acq_fcn_lcb.py ├── bads │ ├── README.md │ ├── __init__.py │ ├── bads.py │ ├── bads_dump.py │ ├── gaussian_process_train.py │ ├── optimize_result.py │ ├── option_configs │ │ ├── __init__.py │ │ ├── advanced_bads_options.ini │ │ ├── basic_bads_options.ini │ │ ├── options_confs.py │ │ ├── test_options.ini │ │ └── test_options2.ini │ └── options.py ├── decorators │ ├── README.md │ ├── __init__.py │ └── handle_0D_1D_input.py ├── function_examples.py ├── function_logger │ ├── __init__.py │ ├── constraints_check.py │ └── function_logger.py ├── init_functions │ ├── __init__.py │ └── init_sobol.py ├── poll │ ├── __init__.py │ └── poll_mads_2n.py ├── search │ ├── __init__.py │ ├── es_search.py │ ├── grid_functions.py │ └── search_hedge.py ├── stats │ ├── README.md │ ├── __init__.py │ ├── get_hpd.py │ ├── kde1d.py │ └── kldiv_mvn.py ├── testing │ ├── __init__.py │ ├── bads │ │ ├── X.dat │ │ ├── __init__.py │ │ ├── dF.dat │ │ ├── dF_gplogjoint.dat │ │ ├── hyp.dat │ │ ├── mu.dat │ │ ├── poll │ │ │ ├── __init__.py │ │ │ └── test_poll_mads.py │ │ ├── scripts │ │ │ ├── ackley_example.py │ │ │ ├── bads_quadratic_noisy_example.py │ │ │ ├── bads_rosenbrock_example.py │ │ │ ├── non_bound_example.py │ │ │ └── rastrigin_example.py │ │ ├── search │ │ │ └── test_search.py │ │ ├── test_bads_optimization.py │ │ ├── test_gaussian_process_train.py │ │ ├── test_init_conf.py │ │ ├── test_iteration_history.py │ │ └── y.dat │ ├── decorators │ │ ├── __init__.py │ │ └── test_handle_0D_1D_input_decorator.py │ ├── function_logger │ │ ├── __init__.py │ │ └── test_function_logger.py │ ├── run_tests.py │ └── variable_transformer │ │ ├── __init__.py │ │ └── test_variable_transformer.py ├── utils │ ├── __init__.py │ ├── iteration_history.py │ ├── period_check.py │ └── timer │ │ ├── __init__.py │ │ └── timer.py └── variable_transformer │ ├── __init__.py │ └── variables_transformer.py ├── pyproject.toml └── setup.py /.github/workflows/build.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/acerbilab/pybads/HEAD/.github/workflows/build.yml -------------------------------------------------------------------------------- /.github/workflows/docs.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/acerbilab/pybads/HEAD/.github/workflows/docs.yml -------------------------------------------------------------------------------- /.github/workflows/merge-tests.yml: 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