├── .Rbuildignore ├── .Rproj.user ├── 0C38D57A │ ├── build_options │ ├── cpp-definition-cache │ ├── persistent-state │ ├── rmd-outputs │ ├── saved_source_markers │ └── sources │ │ └── prop │ │ ├── 12D15B95 │ │ ├── 580C7FF3 │ │ ├── 9E15515B │ │ ├── C4CC88D5 │ │ ├── D751B135 │ │ ├── E7C3CA10 │ │ └── INDEX └── shared │ └── notebooks │ ├── patch-chunk-names │ └── paths ├── .gitattributes ├── .github ├── .gitignore └── workflows │ ├── r-cmd-check.yaml │ └── r.yml ├── .gitignore ├── DESCRIPTION ├── LICENSE ├── LICENSE.md ├── NAMESPACE ├── NEWS.md ├── R ├── 00_datatable_aware.r ├── 01_imports.r ├── aaa.r ├── bioticVelocity.r ├── canada.r ├── compareResponse.r ├── coordImprecision.r ├── countPoints.r ├── crss.r ├── customCRS.r ├── decimalToDms.r ├── dmsToDecimal.r ├── elimCellDuplicates.r ├── enmSdmX.r ├── evalAUC.r ├── evalContBoyce.r ├── evalMultiAUC.r ├── evalTSS.r ├── evalThreshold.r ├── evalThresholdStats.r ├── evalTjursR2.r ├── extentToVect.r ├── gbm.r ├── geoFold.r ├── geoFoldContrast.r ├── geoThin.r ├── getCRS.r ├── getValueByCell.r ├── globalx.r ├── interpolateRasts.r ├── lemurs.r ├── longLatRasts.r ├── mad0.r ├── mad1.r ├── madClim.r ├── madClim2030.r ├── madClim2050.r ├── madClim2070.r ├── madClim2090.r ├── modelSize.r ├── nearestEnvPoints.r ├── nearestGeogPoints.r ├── nicheOverlapMetrics.r ├── plotExtent.r ├── predictEnmSdm.r ├── predictMaxEnt.r ├── predictMaxNet.r ├── predict_maxent.r ├── private_calcWeights.r ├── private_scalePredictors.r ├── responseCurves.r ├── sampleRast.r ├── spatVectorToSpatial.r ├── squareCellRast.r ├── summaryByCrossValid.r ├── test_trainGlm.r ├── trainBrt.r ├── trainByCrossValid.r ├── trainESM.r ├── trainGam.r ├── trainGlm.r ├── trainMaxEnt.r ├── trainMaxNet.r ├── trainNs.r ├── trainRf.r ├── troubleshooting_parallel_operations.r └── weightByDist.r ├── README.md ├── data ├── crss.rda ├── lemurs.rda ├── mad0.rda └── mad1.rda ├── enmSdmX.Rproj ├── enmSdmX.png ├── enmSdmX_workspace.code-workspace ├── inst ├── CITATION └── extdata │ ├── canada_level0_gadm41.gpkg │ ├── madClim.tif │ ├── madClim2030.tif │ ├── madClim2050.tif │ ├── madClim2070.tif │ └── madClim2090.tif └── man ├── bioticVelocity.Rd ├── canada.Rd ├── compareResponse.Rd ├── coordImprecision.Rd ├── countPoints.Rd ├── crss.Rd ├── customAlbers.Rd ├── decimalToDms.Rd ├── dmsToDecimal.Rd ├── dot-calcWeights.Rd ├── dot-cardinalDistance.Rd ├── dot-euclid.Rd ├── dot-interpCoordFromQuantile.Rd ├── dot-scalePredictors.Rd ├── elimCellDuplicates.Rd ├── enmSdmX.Rd ├── evalAUC.Rd ├── evalContBoyce.Rd ├── evalMultiAUC.Rd ├── evalTSS.Rd ├── evalThreshold.Rd ├── evalThresholdStats.Rd ├── evalTjursR2.Rd ├── examples ├── bioticVelocity_examples.r ├── customCRS_examples.r ├── geoFold_examples.r ├── nearestEnvPoints_example.r ├── nearestGeogPoints_example.r ├── trainByCrossValid_examples.r ├── trainESM_examples.r └── trainXYZ_examples.r ├── extentToVect.Rd ├── figures ├── logo.png └── sdm_enm.png ├── geoFold.Rd ├── geoFoldContrast.Rd ├── geoThin.Rd ├── getCRS.Rd ├── 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