├── header.png ├── README.md ├── results ├── sequence_similarity.csv └── replicate_summary.csv └── LICENSE.md /header.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/adaptyvbio/egfr_competition_2/HEAD/header.png -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- 1 | ![Data package](header.png) 2 | 3 | This repo contains the results data for Round 2 of [EGFR Protein Design Competition](https://foundry.adaptyvbio.com/competition), hosted by Adaptyv Bio in partnership with Polaris and Dimension. 4 | 5 | ### 🆕 Update: Neutralisation data now available 6 | 7 | We've performed a neutralisation assay and are now releasing the results. In a neutralisation assay, we measure the interaction between the competitor protein (here, human EGF) and the target (EGFR), both alone (as a control) and in the presence of a binder. From this signal, we calculate the neutralisation coefficient, which estimates how effectively the binder prevents the competitor-target interaction. A neutralisation coefficient of 100% means complete inhibition, while a binder with 0% does not hinder the EGF-EGFR interaction at all. 8 | 9 | --- 10 | 11 | 📊 Processed binding affinity characterization data and sequence similarity metrics: 12 | 13 | > [Results folder](results) 14 | 15 | 🔬 Kinetic curves and raw data: 16 | 17 | > [https://api.adaptyvbio.com/storage/v1/object/public/egfr_design_competition_2/package.zip](https://api.adaptyvbio.com/storage/v1/object/public/egfr_design_competition_2/package.zip) 18 | 19 | 🛡️ Neutralisation data: 20 | > [https://api.adaptyvbio.com/storage/v1/object/public/egfr_design_competition_2/package_neutralisation.zip](https://api.adaptyvbio.com/storage/v1/object/public/egfr_design_competition_2//package_neutralisation.zip) 21 | 22 | 🧱 AlphaFold2 Structure predictions (.pdb) for all 400 selected designs: 23 | 24 | > [https://api.adaptyvbio.com/storage/v1/object/public/egfr_design_competition_2/structure_predictions.zip](https://api.adaptyvbio.com/storage/v1/object/public/egfr_design_competition_2/structure_predictions.zip) 25 | 26 | 🌐 Embeddings from a variety of models (ESM C, ESM2, Saprot, Protek) for all submissions: 27 | 28 | > [https://api.adaptyvbio.com/storage/v1/object/public/egfr_design_competition_2/embeddings.zip](https://api.adaptyvbio.com/storage/v1/object/public/egfr_design_competition_2/embeddings.zip) 29 | 30 | # Methods 31 | 32 | ## Metrics 33 | 34 | More details on the metrics that were used for ranking the sequences can be found in the [metrics repo](https://github.com/adaptyvbio/competition_metrics). 35 | 36 | ### AlphaFold2 Scores 37 | 38 | Two of the metrics that we used for scoring the designs computationally are derived from AlphaFold2 predictions. To calculate them, we began by generating a structure prediction using ColabFold (with 5 models, 3 recycles, 3 seeds, with templates and without initial guess). The top-ranked model was selected for each design. 39 | 40 | To get **PAE interaction**, The Predicted Aligned Error (PAE) of the top-ranked prediction was then averaged across residue pairs, where one residue belongs to the target and the other to the binder, as done [here](https://github.com/nrbennet/dl_binder_design/blob/cafa3853ac94dceb1b908c8d9e6954d71749871a/af2_initial_guess/predict.py#L197). 41 | 42 | The second metric, **ipTM**, is predicted by the model directly. 43 | 44 | Here we also show the predicted Local Distance Difference Test (**pLDDT**) scores, averaged over residues of the binder chain. 45 | 46 | ### ESM PLL 47 | 48 | The third metric used in the ranking is **ESM2 PLL** (Pseudo Log Likelihood). We use the `esm2_t33_650M_UR50D` model for the calculation and we do not normalize by the length of the sequence. 49 | 50 | ### Sequence Similarity Check 51 | 52 | We checked each sequence against several sequence databases. As part of the initial competition rules, only proteins that were at least 10 amino acids (AA) away from a published sequence were considered valid and counted in the final leaderboard. The results of that similarity search are stored in the results folder. The **similarity check** metric is calculated as `identity * coverage`, where: 53 | 54 | • **Identity** is the highest percentage of matching amino acids between a subsequence of the query and a subsequence of the database entry. 55 | 56 | • **Coverage** is the fraction of the query sequence that aligns with the database entry. 57 | 58 | Proteins with less than 10 amino acid distance to a database entry were excluded from the competition. A `similarity_check` value of “null” indicates that no matches were found in any of the the databases. 59 | 60 | The databases that we checked are SwisssProt, THPdb, USPTO, sequences from the first round of the competition and binders designed by [Cao et al. (2022)](https://www.nature.com/articles/s41586-022-04654-9). The scripts can be found in the [first round data package repo](https://github.com/adaptyvbio/egfr_competition_1/tree/main). 61 | 62 | ### FoldSeek Shape Similarity 63 | 64 | We checked every design against SwissProt and PDB databases using TM-score in [FoldSeek](https://search.foldseek.com) by the [Steinegger Lab](https://steineggerlab.com/en/). We calculated several metrics, of which: 65 | 66 | • **evalue**: The E-value, representing the number of expected alignments with a score as good as or better than the one observed by chance. Lower values indicate more significant alignments. 67 | 68 | • **alntmscore**: TM-score of the alignment, which measures structural similarity on a scale from 0 to 1 (1 being identical structures). 69 | 70 | • **lddt**: Local Distance Difference Test (LDDT) score for the aligned region, indicating alignment quality. Ranges from 0 to 1, with 1 indicating perfect alignment. 71 | 72 | • **prob**: The probability of the alignment being correct or meaningful. 73 | 74 | Full details with bash scripts and additional files can be found [here](https://github.com/wells-wood-research/adaptyv-bio-analysis/tree/main/data/foldseek). 75 | 76 | ### DE-STRESS Physicochemical Properties 77 | 78 | [DE-STRESS](https://pragmaticproteindesign.bio.ed.ac.uk/de-stress/) is a tool from the [Wells Wood Research Group](https://www.wellswoodresearchgroup.com) that evaluates structural models of designed and engineered proteins. The program calculates roughly 70 physicochemical properties using a variety of software tools, including all-atom scoring functions (such as Rosetta, EvoEF2, BUDE), measures of geometric packing density and hydrogen bonding quality, aggregation propensity, isoelectric point, and many others. 79 | 80 | We ran DE-STRESS on the AlphaFold structure predictions for all 400 selected designs from round 2 of the competition, both with EGFR (`destress_binder_with_egfr.csv`) and without (`destress_binder_only.csv`). 81 | 82 | The full glossary of metrics and descriptions is available [here](https://pragmaticproteindesign.bio.ed.ac.uk/de-stress/glossary). DE-STRESS can be used through [web server](https://pragmaticproteindesign.bio.ed.ac.uk/de-stress/) or through [Command Line Interface (CLI)](https://github.com/wells-wood-research/de-stress). The full paper is available [here](https://academic.oup.com/peds/article/doi/10.1093/protein/gzab029/6462357). 83 | 84 | ### Neutralisation Coefficient 85 | 86 | In a neutralisation assay, we measure the interaction between the competitor protein (here, human EGF) and the target (EGFR), both alone (as a control) and in the presence of a binder. From this signal, we calculate the neutralisation coefficient, which estimates how effectively the binder prevents the competitor-target interaction. A neutralisation coefficient of 100% means complete inhibition, while a binder with 0% does not hinder the EGF-EGFR interaction at all. 87 | 88 | ## Experimental Workflow 89 | 90 | ### DNA Design 91 | 92 | The submitted protein sequences were reverse-translated, and the corresponding DNA sequences were optimized using Adaptyv's internal pipeline. This process considered several parameters, including optimal codon usage for cell-free systems, mRNA secondary structure stability, and synthesizability factors. Additionally, non-coding regions at the 5' and 3' ends, optimized for cell-free expression, were incorporated into the coding sequences. Suitable gene constructs were successfully generated for all submitted protein sequences. 93 | 94 | ### Protein Synthesis 95 | 96 | Protein synthesis was carried out using an optimized cell-free expression system, suitable for a wide range of proteins. The template DNA was added, and protein expression was conducted over a defined period. During the competition, at least two expression batches were performed for each sequence entry, with some sequences tested up to four times under varying conditions. Protein synthesis success was assessed via a label-free quantification assay. Sequences that yielded less than 0.02 µg/mL of protein were excluded from further experimental characterization. 97 | 98 | ### Binding Assay 99 | 100 | The binding assay was conducted using Bio-Layer Interferometry (BLI), a label-free technology for biomolecular interaction measurement. A multi-cycle kinetic assay was performed against the target antigen. Expressed ligands were immobilized on the probe surface using tag-specific chemistry, and several concentrations of the antigen (ranging from 1000 nM to 10 nM) were flowed over the probe. The experiments were performed in duplicate using a HBS-T buffer with 0.5% BSA at 25°C. 101 | 102 | ### Data analysis 103 | 104 | The binding signals were baseline-corrected and fitted using a 1:1 binding model across all tested concentrations for each replicate. This approach allowed us to extract the kinetic rates (association and dissociation) and calculate the affinity constants (KD) for each ligand. The predicted binding curves were generated based on the fit parameters, ensuring an accurate representation of the interaction dynamics. In cases where the maximum signal fell below the quantifiable threshold, or when the interaction kinetics were too fast relative to the device's temporal resolution, we employed equilibrium analysis to estimate the dissociation constant (KD). Each experimental replicate was analyzed independently. 105 | 106 | # License 107 | 108 | All code is licensed under Apache 2, all data is licensed under the [ODbL](https://opendatacommons.org/licenses/odbl/). Contact igor@adaptyvbio.com or any other responsible at Adaptyv if you require a different license. 109 | -------------------------------------------------------------------------------- /results/sequence_similarity.csv: -------------------------------------------------------------------------------- 1 | id,db_id,identity,alignment_length,query_length,num_mismatches,query_coverage,target_coverage,db,similarity_check,distance 2 | xiuming_li2015.Eureka_seq_1,USPTO:QYR87978,0.958,241,241,10,1.0,0.391,uspto,0.958,10.122000000000009 3 | round1zeroshot.K5Q_N70S_K71R_N73T_S87T_N88D_R179K_K183R_E213D_S214P,USPTO:WIO01870,0.958,241,241,10,1.0,0.389,uspto,0.958,10.122000000000009 4 | xiuming_li2015.Eureka_seq_3,USPTO:WPT55818,0.95,241,241,12,1.0,0.664,uspto,0.95,12.050000000000011 5 | xiuming_li2015.Eureka_seq_4,USPTO:ADS79417,0.95,241,241,12,1.0,0.391,uspto,0.95,12.050000000000011 6 | julian.faust.Demupitamab_mpnn_19_scfv,USPTO:WLK33165,0.947,246,246,13,1.0,0.352,uspto,0.947,13.038000000000013 7 | alejandro.corrochano-navarro.eng_scfv_binder_2,USPTO:QYR87979,0.946,241,241,13,1.0,0.391,uspto,0.946,13.014000000000012 8 | alejandro.corrochano-navarro.eng_scfv_binder_1,USPTO:WFJ15662,0.946,241,241,13,1.0,0.391,uspto,0.946,13.014000000000012 9 | alejandro.corrochano-navarro.eng_scfv_binder_3,USPTO:WZE39334,0.941,241,241,14,1.0,0.265,uspto,0.941,14.219000000000012 10 | jack.li.EGFRbindingCandidate_7,USPTO:ATJ11830,0.936,220,220,14,1.0,0.487,uspto,0.936,14.079999999999988 11 | jude.wells.21.panitumumab_fused_trimmed_crossbreed3,USPTO:QTW29116,0.933,241,241,16,1.0,0.996,uspto,0.933,16.146999999999988 12 | nhaas.8,USPTO:WIO01864,0.923,247,247,18,1.0,0.581,uspto,0.923,19.01899999999999 13 | chrisxushaoyong.hu_nano2_4_85252b,USPTO:WPU02589,0.921,127,127,10,1.0,0.142,uspto,0.921,10.032999999999994 14 | nhaas.2,USPTO:WIO01864,0.919,247,247,19,1.0,0.581,uspto,0.919,20.00699999999999 15 | chrisxushaoyong.hu_nano1_1_ff3e18,USPTO:WPU02636,0.919,124,124,10,1.0,0.139,uspto,0.919,10.043999999999995 16 | chrisxushaoyong.hu_nano1_3_eef94e,USPTO:WPU02636,0.919,124,124,10,1.0,0.139,uspto,0.919,10.043999999999995 17 | chrisxushaoyong.hu_nano1_5_559c85,USPTO:WPU02337,0.919,124,124,10,1.0,1.0,uspto,0.919,10.043999999999995 18 | zhoup1366.DBZ10___A,USPTO:QPY38970,0.914,117,117,10,1.0,0.529,uspto,0.914,10.061999999999996 19 | nhaas.4,USPTO:WIO01869,0.914,247,247,21,1.0,0.585,uspto,0.914,21.24199999999999 20 | chrisxushaoyong.hu_nano2_2_7ef96e,USPTO:WIU66836,0.913,127,127,11,1.0,1.0,uspto,0.913,11.048999999999996 21 | mosquitolkfo.nAb_design_9,USPTO:WPU02325,0.92,126,127,10,0.992,0.992,uspto,0.91264,11.09472 22 | mosquitolkfo.nAb_design_3,USPTO:WIU67039,0.92,126,127,10,0.992,0.141,uspto,0.91264,11.09472 23 | mosquitolkfo.nAb_design_7,USPTO:WIV71023,0.92,126,127,10,0.992,0.46,uspto,0.91264,11.09472 24 | mosquitolkfo.nAb_design_6,USPTO:QXC74401,0.92,126,127,10,0.992,0.245,uspto,0.91264,11.09472 25 | mosquitolkfo.nAb_design_1,USPTO:QYR87801,0.92,126,127,10,0.992,0.992,uspto,0.91264,11.09472 26 | nhaas.3,USPTO:WZE39331,0.91,247,247,22,1.0,0.372,uspto,0.91,22.229999999999997 27 | revoli.mutated_nAb_8,USPTO:WON02692,0.909,122,122,11,1.0,0.118,uspto,0.909,11.101999999999997 28 | revoli.mutated_nAb_9,USPTO:WIO01682,0.909,122,122,11,1.0,0.32,uspto,0.909,11.101999999999997 29 | revoli.mutated_nAb_5,4krl_B,0.909,122,122,11,1.0,0.917,pdb,0.909,11.101999999999997 30 | jude.wells.21.6b3s_necitumumab_fused_trimmed_task_89_iter_216,USPTO:WLO73086,0.91,245,242,22,0.996,0.459,uspto,0.90636,22.660879999999988 31 | jude.wells.21.6b3s_necitumumab_fused_trimmed_task_98_iter_184,USPTO:WLO73089,0.913,244,242,21,0.992,0.227,uspto,0.905696,22.821567999999985 32 | jude.wells.21.panitumumab_fused_trimmed_task_12_iter_123,USPTO:WIV75068,0.904,241,241,23,1.0,0.581,uspto,0.904,23.135999999999992 33 | cchallacombe.6,4krm_J,0.903,124,124,12,1.0,0.932,pdb,0.903,12.027999999999995 34 | nhaas.6,USPTO:ADS79418,0.894,247,247,25,1.0,0.368,uspto,0.894,26.181999999999995 35 | jude.wells.21.6b3s_necitumumab_fused_trimmed_task_211_iter_150,USPTO:WLO73088,0.893,245,242,26,0.996,0.227,uspto,0.889428,26.758424 36 | zhoup1366.DBZ7___A,USPTO:WLJ31389,0.889,118,118,13,1.0,0.992,uspto,0.889,13.098 37 | 724928537.DBZ6___A,USPTO:WIU66836,0.888,126,119,13,1.0,0.992,uspto,0.888,13.328 38 | tim.silica_corpora_regions_sampled_epitope_2_generated_variant_8_rank_3_phase_2,4krn_A,0.886,132,132,15,1.0,0.957,pdb,0.886,15.047999999999998 39 | merlettaia.seq0v3,USPTO:WON02681,0.882,128,128,15,1.0,0.311,uspto,0.882,15.104 40 | julian.faust.PimurutamabxBecotatug_scfv,USPTO:ARH63869,0.879,249,246,30,1.0,0.992,uspto,0.879,29.766 41 | tim.silica_corpora_sampled_epitope_2_generated_variant_9_rank_6_phase_2,USPTO:AOL43490,0.876,121,121,15,1.0,0.323,uspto,0.876,15.004 42 | zhoup1366.DBZ1___A,AJM06724_AJM06725-H,0.876,121,119,15,1.0,0.992,plabdab,0.876,14.756 43 | zhoup1366.DBZ6___A,7kxj_I,0.873,119,119,15,1.0,0.529,pdb,0.873,15.113 44 | tim.silica_corpora_sampled_epitope_0_generated_variant_1_rank_8_phase_2,USPTO:QPZ32079,0.867,128,128,17,1.0,0.494,uspto,0.867,17.024 45 | tim.silica_corpora_sampled_epitope_0_generated_variant_8_rank_1_phase_2,USPTO:QXC86225,0.864,121,121,16,1.0,0.494,uspto,0.864,16.456 46 | tim.silica_corpora_regions_sampled_epitope_0_generated_variant_6_rank_7_phase_2,cchallacombe-thermo1,0.861,127,127,18,1.0,1.0,first_round,0.861,17.653000000000002 47 | huiyu.cai.H3_15_877_H,USPTO:ARH63884,0.852,121,121,17,1.0,0.474,uspto,0.852,17.908 48 | elian.elian4,x.rustamov-m_18_41,0.85,100,100,15,1.0,1.0,first_round,0.85,15.000000000000002 49 | huiyu.cai.H3_15_4373_H,USPTO:ARH63869,0.842,121,121,19,1.0,0.474,uspto,0.842,19.118 50 | huiyu.cai.H3_15_3351_H,ARH63870-H,0.842,121,121,19,1.0,1.0,plabdab,0.842,19.118 51 | elian.elian5,x.rustamov-m_18_41,0.84,100,100,16,1.0,1.0,first_round,0.84,16.000000000000004 52 | elian.elian1,x.rustamov-m_18_41,0.84,100,100,16,1.0,1.0,first_round,0.84,16.000000000000004 53 | zhoup1366.DBZ8___A,USPTO:ATJ11206,0.838,118,118,19,1.0,0.992,uspto,0.838,19.116000000000003 54 | julian.faust.Pimurutamab_mpnn_18_scfv,USPTO:QHX97463,0.837,246,246,39,1.0,0.996,uspto,0.837,40.098000000000006 55 | huiyu.cai.H3_15_2431_H,ARH63869-H,0.836,121,121,19,1.0,1.0,plabdab,0.836,19.844000000000005 56 | 724928537.DBZ8___A,USPTO:WYI55243,0.831,119,119,20,1.0,0.992,uspto,0.831,20.111000000000004 57 | elian.elian3,x.rustamov-m_18_41,0.83,100,100,17,1.0,1.0,first_round,0.83,17.000000000000004 58 | elian.elian2,x.rustamov-m_18_41,0.83,100,100,17,1.0,1.0,first_round,0.83,17.000000000000004 59 | julian.faust.Pimurutamab_mpnn_17_scfv,USPTO:QRM11247,0.829,246,246,41,1.0,0.369,uspto,0.829,42.06600000000001 60 | julian.faust.BecotatugxPimurutamab_scfv,USPTO:ARH63884,0.827,249,246,42,1.0,0.992,uspto,0.827,42.55800000000001 61 | youngsuko2000.last,1p9j_A,0.958,48,56,2,0.857,0.889,pdb,0.8210059999999999,10.023664000000004 62 | hughy.7om4_B_A_180_rnd1_v1_full,USPTO:QHX19420,0.819,122,122,21,1.0,1.0,uspto,0.819,22.082000000000008 63 | 724928537.DBZ7___A,USPTO:WQB09211,0.816,119,119,22,1.0,0.992,uspto,0.816,21.896000000000008 64 | huiyu.cai.H3_15_2847_H,ARH63869-H,0.816,121,121,22,1.0,1.0,plabdab,0.816,22.264000000000006 65 | stocco.filippo.1.3.3.18_65_0_iteration3_1.028317065130863,USPTO:AVY40267,0.862,51,54,7,0.944,0.962,uspto,0.8137279999999999,10.058688000000004 66 | hughy.7om4_B_A_33_rnd2_v2_full,UOS92509_UOS92510-H,0.813,122,122,22,1.0,1.0,plabdab,0.813,22.814000000000007 67 | paulafcfranklin.synth_rosetta_1,P98135,0.811,53,53,10,1.0,0.398,swissprot,0.811,10.016999999999998 68 | kerrding.seq8,alecl-Sequence1,0.811,53,53,10,1.0,1.0,first_round,0.811,10.016999999999998 69 | kerrding.seq7,alecl-Sequence1,0.811,53,53,10,1.0,1.0,first_round,0.811,10.016999999999998 70 | "colby.TUPEGFR_018___anti-EGFR,_Fv-like_protein,_diffused_with_ESM3",USPTO:WLK33152,0.819,247,250,44,0.988,1.0,uspto,0.8091719999999999,47.70700000000003 71 | cchallacombe.1,4krm_H,0.809,130,130,23,1.0,0.932,pdb,0.809,24.829999999999995 72 | merlettaia.seq6v4,USPTO:AME79112,0.806,124,124,24,1.0,1.0,uspto,0.806,24.055999999999997 73 | karmanyaaggarwal.DS002542,USPTO:WPT82538,0.806,124,124,24,1.0,0.348,uspto,0.806,24.055999999999997 74 | hughy.7om4_B_A_17_rnd2_v2_full,AVY13441_AVY13442-H,0.803,122,122,24,1.0,1.0,plabdab,0.803,24.033999999999995 75 | youngsuko2000.fast4,USPTO:AAQ70183,0.978,46,56,1,0.821,0.836,uspto,0.8029379999999999,11.035472000000004 76 | aureliabustos.bce_var464,USPTO:QFN54482,0.833,48,50,8,0.96,0.96,uspto,0.79968,10.016000000000002 77 | aureliabustos.bce_var433,1iox_A,0.833,48,50,8,0.96,0.96,pdb,0.79968,10.016000000000002 78 | aureliabustos.bce_var702,1ip0_A,0.833,48,50,8,0.96,0.96,pdb,0.79968,10.016000000000002 79 | carson.vaux.Baker1_18,cside_mot_3h_hb1_1541_000000003_0001_2_11_H_._ems_3hC_921_0001_0001_0002_0001__14__E,0.825,63,65,11,0.969,1.0,baker,0.7994249999999999,13.037375000000004 80 | jvogt4.vogt_scFV_2470,USPTO:ABL53925,0.799,248,248,50,1.0,0.996,uspto,0.799,49.84799999999999 81 | karmanyaaggarwal.DS004729,USPTO:WIU09899,0.798,124,124,25,1.0,1.0,uspto,0.798,25.047999999999995 82 | stocco.filippo.1.3.3.18_40_0_iteration12_1.0321554292304749,USPTO:UOS75417,0.843,51,54,8,0.944,0.962,uspto,0.7957919999999999,11.027232000000003 83 | karmanyaaggarwal.DS003076,USPTO:WPU03134,0.793,124,124,25,1.0,1.0,uspto,0.793,25.668 84 | stocco.filippo.1.3.3.18_51_2_iteration3_1.0356664070457622,USPTO:AVY40267,0.823,51,53,9,0.962,0.962,uspto,0.7917259999999999,11.038522000000004 85 | jvogt4.vogt_scFV_2143,USPTO:AFA64028,0.787,248,248,53,1.0,0.996,uspto,0.787,52.82399999999999 86 | jvogt4.vogt_scFV_2009,USPTO:AOD87787,0.787,248,248,53,1.0,0.996,uspto,0.787,52.82399999999999 87 | youngsuko2000.queen,USPTO:ACK26763,0.88,50,56,6,0.893,0.926,uspto,0.78584,11.99296 88 | merlettaia.seq52v3,cchallacombe-thermo1,0.784,130,130,27,1.0,1.0,first_round,0.784,28.079999999999995 89 | cchallacombe.4,4krm_H,0.784,130,130,27,1.0,0.932,pdb,0.784,28.079999999999995 90 | jvogt4.vogt_scFV_2279,USPTO:ADA12154,0.783,248,248,54,1.0,0.996,uspto,0.783,53.816 91 | jvogt4.vogt_scFV_0128,USPTO:ABT09201,0.783,248,248,54,1.0,0.996,uspto,0.783,53.816 92 | junhee.park1999.EGFR_binder_9,USPTO:WIO05645,0.78,248,248,54,1.0,0.996,uspto,0.78,54.56 93 | junhee.park1999.EGFR_binder_7,USPTO:WIO05645,0.78,248,248,54,1.0,0.996,uspto,0.78,54.56 94 | merlettaia.seq70v3,UOS75774_UOS75749-H,0.781,128,120,26,0.992,0.992,plabdab,0.774752,27.02976 95 | merlettaia.seq0v4,USPTO:AME79112,0.774,124,124,28,1.0,1.0,uspto,0.774,28.024 96 | junhee.park1999.EGFR_binder_6,USPTO:WIO05645,0.772,248,248,56,1.0,0.996,uspto,0.772,56.544 97 | hughy.7om4_B_A_8_rnd2_v2_full,8xld_B,0.77,122,122,27,1.0,0.412,pdb,0.77,28.06 98 | youngsuko2000.ysar,USPTO:ACW19354,0.877,49,56,6,0.875,0.925,uspto,0.767375,13.026999999999996 99 | paulafcfranklin.synth_rosetta_4,USPTO:ADL81725,0.78,50,51,11,0.98,0.312,uspto,0.7644,12.0156 100 | paulafcfranklin.synth_rosetta_7,USPTO:ADL96486,0.764,51,51,12,1.0,0.319,uspto,0.764,12.036 101 | alex.naka.Charizard,1eph_A,0.79,43,45,9,0.956,0.811,pdb,0.75524,11.0142 102 | kerrding.seq6,alecl-Sequence1,0.754,53,53,13,1.0,1.0,first_round,0.754,13.038 103 | paulafcfranklin.synth_rosetta_2,Q06922,0.75,52,52,13,1.0,0.325,swissprot,0.75,13.0 104 | aureliabustos.wt_noised_I_scaffold_shorted_var71,USPTO:AHE16413,0.826,46,51,8,0.902,0.868,uspto,0.7450519999999999,13.002348000000003 105 | paulafcfranklin.synth_rosetta_6,USPTO:AYH73035,0.741,58,58,15,1.0,0.183,uspto,0.741,15.022 106 | paulafcfranklin.synth_rosetta_8,P98135,0.767,56,58,13,0.966,0.421,swissprot,0.740922,15.026524000000002 107 | keaun.GWFGVVFKADIARVSEFVAIGLSTGPLGSESTFSIWRQ,USPTO:AMI18570,0.736,38,38,10,1.0,0.217,uspto,0.736,10.032 108 | keaun.GAFPVVFKADIARVSEFVAIGPSTGYLGSLTTMSGVNQ,USPTO:AMI86198,0.736,38,38,10,1.0,0.171,uspto,0.736,10.032 109 | keaun.GWFGVVFKADIAGVSEKVAIELSGGYEGSLTTPSGWNQ,USPTO:AMI18570,0.736,38,38,10,1.0,0.217,uspto,0.736,10.032 110 | keaun.GIFGVVFKADIARVSIDVAIDYSTGYLGSLTTFSGCNQ,USPTO:AMI18570,0.736,38,38,10,1.0,0.217,uspto,0.736,10.032 111 | kerrding.seq5,alecl-Sequence1,0.735,53,53,14,1.0,1.0,first_round,0.735,14.045 112 | stocco.filippo.1.3.3.18_4_2_iteration0_1.0407930462953479,USPTO:ACW19345,0.76,50,52,12,0.962,0.943,uspto,0.73112,13.98176 113 | paulafcfranklin.synth_rosetta_10,P01135,0.75,56,58,14,0.966,0.35,swissprot,0.7244999999999999,15.979000000000005 114 | paulafcfranklin.synth_rosetta_3,USPTO:AFL27216,0.724,58,58,16,1.0,0.363,uspto,0.724,16.008000000000003 115 | AmirM.MHosseini.seq3,USPTO:AGV80978,0.76,50,53,12,0.943,0.926,uspto,0.71668,15.015960000000002 116 | AmirM.MHosseini.seq9,USPTO:ARH80538,0.716,53,53,15,1.0,0.056,uspto,0.716,15.052 117 | AmirM.MHosseini.seq1,USPTO:WOM84038,0.767,56,60,13,0.933,0.35,uspto,0.7156110000000001,17.063339999999993 118 | keaun.GWFGVVFKADIARDSEFVAILESQGYLSSITTFSGWNQ,USPTO:AMI18570,0.71,38,38,11,1.0,0.217,uspto,0.71,11.02 119 | paulafcfranklin.synth_rosetta_5,USPTO:WQA08965,0.788,52,58,11,0.897,0.325,uspto,0.706836,17.003512 120 | aureliabustos.wwt_noised_I_scaffold_shorted_var9391,USPTO:AHE16423,0.782,46,51,10,0.902,0.868,uspto,0.705364,15.026436 121 | aureliabustos.wwt_noised_I_scaffold_shorted_var6640,USPTO:AEF61826,0.782,46,51,10,0.902,0.868,uspto,0.705364,15.026436 122 | hughy.4krp_B_A_89_rnd3_full,USPTO:WPT30535,0.703,127,127,37,1.0,1.0,uspto,0.703,37.71900000000001 123 | pastei5.egfr_binder_01,USPTO:WPT47625,0.705,78,80,23,0.975,0.655,uspto,0.687375,25.010000000000005 124 | aureliabustos.wwt_noised_I_scaffold_shorted_var8423,USPTO:QPW45629,0.833,42,51,7,0.824,0.036,uspto,0.6863919999999999,15.994008000000006 125 | aureliabustos.wwt_noised_I_scaffold_shorted_var7524,USPTO:QKP71573,0.833,42,51,7,0.824,0.036,uspto,0.6863919999999999,15.994008000000006 126 | a.tucs.Andrejs_Tucs_seq2,USPTO:AHE16429,0.68,47,47,15,1.0,0.887,uspto,0.68,15.039999999999996 127 | briannaughton.1_plus_EGFR,martin.pacesa-EGFR_l138_s90285_mpnn2,1.0,138,203,0,0.68,1.0,first_round,0.68,64.96 128 | paulafcfranklin.synth_rosetta_9,USPTO:AYH73035,0.677,62,58,18,1.0,0.196,uspto,0.677,18.734 129 | stocco.filippo.1.3.3.18_13_0_iteration12_1.0279718223732435,USPTO:ABJ29973,0.707,41,43,12,0.953,0.891,uspto,0.6737709999999999,14.027847000000005 130 | joaosartori2.c4,USPTO:AUE73070,0.684,57,58,18,0.983,0.095,uspto,0.6723720000000001,19.002423999999998 131 | AmirM.MHosseini.seq4,USPTO:AAE43146,0.76,46,53,11,0.868,0.979,uspto,0.65968,18.03696 132 | aswini.seed1,alex.naka-06b390,0.673,49,50,16,0.98,0.98,first_round,0.65954,17.023 133 | qilin_y.test7,USPTO:AOB60841,0.657,38,38,11,1.0,0.032,uspto,0.657,13.034 134 | joaosartori2.c1,USPTO:AKX84495,0.678,56,58,18,0.966,0.35,uspto,0.654948,20.013016 135 | joaosartori2.c6,USPTO:AFD51939,0.678,56,58,18,0.966,0.35,uspto,0.654948,20.013016 136 | nitesh.mishra3.stepwise_egf_based_egfr_binder_3,USPTO:AFQ83082,0.666,48,49,16,0.98,0.906,uspto,0.65268,17.01868 137 | x.rustamov.P_vhh_partial_1_32,USPTO:AQM76585,0.658,117,119,40,0.983,0.27,uspto,0.646814,42.029134 138 | alex.naka.Charmeleon,USPTO:WQA34354,0.725,40,45,11,0.889,0.833,uspto,0.644525,15.996375 139 | zalavi.zalavi3_GGG_shortpacesa,zalavi-egfr_binder3,1.0,150,234,0,0.641,1.0,first_round,0.641,84.006 140 | aswini.seed1_1,alex.naka-158511,0.653,49,50,17,0.98,0.98,first_round,0.6399400000000001,18.002999999999997 141 | zalavi.shortrustamov_GGG_zalavi3,zalavi-egfr_binder3,1.0,150,237,0,0.633,1.0,first_round,0.633,86.979 142 | dre.LGDL_EGFR_008,5wb7_E,0.857,28,38,4,0.737,0.452,pdb,0.631609,13.998858 143 | amirmhosseini47.mohammad_seq2,USPTO:UOL76720,0.785,56,70,12,0.8,0.35,uspto,0.6280000000000001,26.039999999999992 144 | dre.LGDL_EGFR_001,7len_D,0.625,40,37,14,1.0,0.833,pdb,0.625,13.875 145 | a.tucs.Andrejs_Tucs_seq5,USPTO:AHE16413,0.617,47,47,18,1.0,0.887,uspto,0.617,18.001 146 | a.tucs.Andrejs_Tucs_seq8,USPTO:AHE16413,0.617,47,47,18,1.0,0.887,uspto,0.617,18.001 147 | a.tucs.Andrejs_Tucs_seq7,USPTO:AHE16437,0.659,44,47,15,0.936,0.83,uspto,0.616824,18.009272 148 | a.tucs.Andrejs_Tucs_seq6,USPTO:AHE16425,0.63,46,47,17,0.979,0.868,uspto,0.61677,18.011809999999997 149 | a.tucs.Andrejs_Tucs_seq4,USPTO:AHE16441,0.63,46,47,17,0.979,0.868,uspto,0.61677,18.011809999999997 150 | a.tucs.Andrejs_Tucs_seq9,USPTO:AHE16425,0.63,46,47,17,0.979,0.868,uspto,0.61677,18.011809999999997 151 | a.tucs.Andrejs_Tucs_seq3,USPTO:AHE16449,0.63,46,47,17,0.979,0.868,uspto,0.61677,18.011809999999997 152 | zalavi.zalavi3_mergedaltered_rustamov,zalavi-egfr_binder3,1.0,150,244,0,0.615,1.0,first_round,0.615,93.94 153 | lyu.2,x.rustamov-m_18_41,0.648,94,100,33,0.94,0.94,first_round,0.60912,39.088 154 | alan.blakely.12_6,martin.pacesa-EGFR_l138_s90285_mpnn2,1.0,138,228,0,0.605,1.0,first_round,0.605,90.06 155 | alan.blakely.12_3,martin.pacesa-EGFR_l138_s90285_mpnn2,1.0,138,228,0,0.605,1.0,first_round,0.605,90.06 156 | joaosartori2.c3,USPTO:AYH73035,0.686,51,58,16,0.879,0.161,uspto,0.602994,23.026348 157 | eceiiitn786.8s2,alex.naka-158511,0.625,48,50,18,0.96,0.96,first_round,0.6,20.0 158 | a.tucs.Andrejs_Tucs_seq10,USPTO:AHE16441,0.651,43,47,15,0.915,0.811,uspto,0.595665,19.003745 159 | a.tucs.Andrejs_Tucs_seq1,USPTO:AFQ83087,0.666,42,47,14,0.894,0.792,uspto,0.595404,19.016012 160 | qilin_y.test8,USPTO:AHE16438,0.941,17,27,1,0.63,0.018,uspto,0.59283,10.99359 161 | alan.blakely.16_2,martin.pacesa-EGFR_l138_s90285_mpnn2,1.0,138,236,0,0.585,1.0,first_round,0.585,97.94 162 | antorsae.TA_5_1,USPTO:AFQ83054,0.571,35,34,14,1.0,0.66,uspto,0.571,14.586000000000002 163 | antorsae.TA_5_2,USPTO:AFQ83056,0.558,34,33,14,1.0,0.642,uspto,0.558,14.586 164 | briannaughton.2_plus_1,martin.pacesa-EGFR_l138_s90285_mpnn2,1.0,138,250,0,0.552,1.0,first_round,0.552,112.0 165 | briannaughton.1_plus_2,martin.pacesa-EGFR_l138_s90285_mpnn2,1.0,138,250,0,0.552,1.0,first_round,0.552,112.0 166 | lyu.1,x.rustamov-m_18_41,0.591,93,100,38,0.93,0.93,first_round,0.54963,45.037000000000006 167 | briannaughton.EGFR_plus_EGFR,USPTO:AEP72947,0.727,95,126,24,0.754,0.075,uspto,0.548158,56.932092 168 | kerrding.seq9,alecl-Sequence1,0.547,53,53,24,1.0,1.0,first_round,0.547,24.009 169 | antorsae.TA_5_3,USPTO:AHE16428,0.545,33,32,14,1.0,0.623,uspto,0.545,14.56 170 | antorsae.ta397unsafety_2,USPTO:AFQ83056,0.558,34,34,14,0.971,0.642,uspto,0.541818,15.578188 171 | lyu.3,x.rustamov-m_18_41,0.574,94,100,40,0.94,0.94,first_round,0.5395599999999999,46.044 172 | biolucasmachado.engineered_binder_1,P01134,0.607,51,58,20,0.879,0.321,swissprot,0.5335529999999999,27.053926000000004 173 | stocco.filippo.1.3.3.18_37_0_iteration3_1.024851931427025,USPTO:WOM02232,0.558,43,45,19,0.956,0.242,uspto,0.533448,20.99484 174 | akash.arunabharathi.design10,USPTO:AHE16419,0.531,45,44,20,1.0,0.849,uspto,0.531,20.636 175 | antorsae.TA_4_5,USPTO:AHE16454,0.548,31,31,13,0.968,0.033,uspto,0.530464,14.555616 176 | "colby.TUPEGFR_006___anti-EGFR,_Fv-like_protein,_diffused_with_EvoDiff",colby-TUPEGFR_010,0.564,231,250,87,0.924,1.0,first_round,0.5211359999999999,119.71600000000002 177 | alecl.unrelaxedA,USPTO:AYH73035,0.553,47,50,21,0.94,0.148,uspto,0.5198200000000001,24.009 178 | alecl.relaxedA,P55244,0.565,46,50,20,0.92,0.38,swissprot,0.5197999999999999,24.010000000000005 179 | antorsae.TA_4_4,USPTO:AHE16428,0.531,32,32,14,0.969,0.604,uspto,0.514539,15.534752 180 | akash.arunabharathi.design3,7om4_C,0.51,45,44,21,1.0,0.849,pdb,0.51,21.56 181 | biolucasmachado.engineered_binder_5,P01134,0.5,52,52,26,1.0,0.327,swissprot,0.5,26.0 182 | alex.naka.Squirtle,USPTO:AFQ83080,0.51,49,50,24,0.98,0.925,uspto,0.4998,25.01 183 | biolucasmachado.engineered_binder_4,P01134,0.517,56,58,27,0.966,0.352,swissprot,0.499422,29.033524 184 | alex.naka.Blastoise,alex.naka-06b390,0.574,47,54,20,0.87,0.94,first_round,0.4993799999999999,27.033480000000004 185 | alex.naka.Venusaur,alex.naka-158511,0.531,47,50,22,0.94,0.94,first_round,0.49914,25.043000000000003 186 | "colby.TUPEGFR_010___anti-EGFR,_Fv-like_protein,_diffused_with_EvoDiff",8pwu_J,0.492,249,250,121,0.996,0.96,pdb,0.4900319999999999,127.492 187 | nitesh.mishra3.stepwise_scaffold_egfr_binder_6,Q05928,0.5,46,47,23,0.979,0.26,swissprot,0.4895,23.9935 188 | "antorsae.T=0.1,_sample=939,_score=0.9451,_global_score=1.3625,_seq_recovery=0.4250",alecl-Sequence9,0.512,39,40,18,0.95,0.736,first_round,0.4864,20.544000000000004 189 | aswini.seed2_3,alex.naka-36550b,0.5,48,50,24,0.96,0.96,first_round,0.48,26.0 190 | s1995825.cotimed_egf_netsolp_usability_4,USPTO:AJN41153,0.5,44,47,22,0.936,0.83,uspto,0.468,25.004 191 | s1995825.cotimed_egf_netsolp_usability_6,alecl-Sequence3,0.511,43,47,21,0.915,0.811,first_round,0.467565,25.024445 192 | antorsae.TA525_0_0,alecl-Sequence9,0.475,40,40,20,0.975,0.755,first_round,0.4631249999999999,21.475 193 | alex.naka.Wartortle,alex.naka-06b390,0.531,47,54,22,0.87,0.94,first_round,0.46197,29.05362 194 | alex.naka.Charmander,alex.naka-dda1c8,0.531,47,54,22,0.87,0.94,first_round,0.46197,29.05362 195 | alex.naka.Ivysaur,alex.naka-dda1c8,0.531,47,54,22,0.87,0.94,first_round,0.46197,29.05362 196 | christoph.gruber.UpperBinder_XTEN_LowerBinder,USPTO:QHX53878,0.878,33,63,4,0.524,0.131,uspto,0.460072,34.015463999999994 197 | "colby.TUPEGFR_001___anti-EGFR,_Fv-like_protein,_diffused_with_EvoDiff",USPTO:QYS22731,0.456,249,250,134,0.996,0.965,uspto,0.454176,136.456 198 | biolucasmachado.engineered_binder_3,USPTO:WQA08963,0.5,44,49,22,0.898,0.275,uspto,0.449,26.998999999999995 199 | biolucasmachado.engineered_binder_9,USPTO:AAA54921,0.511,43,49,21,0.878,0.956,uspto,0.448658,27.015758 200 | biolucasmachado.engineered_binder_8,P01134,0.509,51,58,25,0.879,0.321,swissprot,0.447411,32.050162 201 | s1995825.cotimed_egf_netsolp_usability_7,USPTO:AJN41163,0.5,42,47,21,0.894,0.792,uspto,0.447,25.991 202 | tadaskluonis.cotimed_egf_BCseq_2,USPTO:UOS75416,0.5,42,47,21,0.894,0.894,uspto,0.447,25.991 203 | s1995825.cotimed_egf_netsolp_usability_1,USPTO:AFQ83059,0.5,42,47,21,0.894,0.792,uspto,0.447,25.991 204 | s1995825.timed_egf_netsolp_usability_consensus_1,USPTO:AFQ83086,0.5,42,47,21,0.894,0.792,uspto,0.447,25.991 205 | s1995825.cotimed_egf_netsolp_usability_5,USPTO:AVY40266,0.5,42,47,21,0.894,0.894,uspto,0.447,25.991 206 | s1995825.cotimed_egf_netsolp_usability_2,alecl-Sequence2,0.5,42,47,21,0.894,0.792,first_round,0.447,25.991 207 | tadaskluonis.cotimed_egf_BCseq_1,alecl-Sequence2,0.488,43,47,22,0.915,0.811,first_round,0.44652,26.01356 208 | tadaskluonis.cotimed_egf_BCseq_0,USPTO:AFQ83082,0.446,47,47,25,1.0,0.887,uspto,0.446,26.038000000000004 209 | s1995825.cotimed_egf_netsolp_usability_3,USPTO:ACM96666,0.466,45,47,23,0.957,0.865,uspto,0.445962,26.039786000000003 210 | briannaughton.2_plus_2,x.rustamov-m_18_41,1.0,100,228,0,0.439,1.0,first_round,0.439,127.908 211 | biolucasmachado.engineered_binder_7,USPTO:AAA54921,0.581,43,58,18,0.741,0.956,uspto,0.430521,33.029782000000004 212 | biolucasmachado.engineered_binder_6,USPTO:AAR75690,0.462,54,58,28,0.931,0.333,uspto,0.430122,33.05292399999999 213 | s1995825.timed_egf_netsolp_usability_consensus_2,Q95ND4,0.476,42,47,21,0.894,0.035,swissprot,0.425544,26.999432 214 | s1995825.cotimed_egf_netsolp_usability_8,USPTO:AFQ83059,0.476,42,47,21,0.894,0.792,uspto,0.425544,26.999432 215 | aswini.seed2_1,A0A6G9KJM3,0.511,44,50,20,0.82,0.506,swissprot,0.41902,29.049000000000003 216 | klima.jason.8HGO_design_vdcjs_1_2,USPTO:AOK84029,0.415,106,106,27,1.0,0.039,uspto,0.415,62.01 217 | "colby.TUPEGFR_012___anti-EGFR,_Fv-like_protein,_diffused_with_EvoDiff",Cetuximab_scFv,0.415,250,250,140,1.0,1.0,first_round,0.415,146.25 218 | biolucasmachado.engineered_binder_2,USPTO:AAA54921,0.558,43,58,19,0.741,0.956,uspto,0.413478,34.018276 219 | julie.jg26n,nside_mot_529aa26556ab0217081d0c2dd4de06a7_0001_1_000000024_0001_35_42_H_._bcov_4helix_09379_0001_0001,0.456,46,50,23,0.88,0.708,baker,0.40128,29.936 220 | klima.jason.8HGO_design_94eja_1_5,USPTO:AAQ71438,0.396,111,111,28,1.0,0.887,uspto,0.396,67.044 221 | nitesh.mishra3.stepwise_rfdiff_egfr_binder_1,USPTO:ABZ17584,0.416,60,64,34,0.938,0.16,uspto,0.3902079999999999,39.02668800000001 222 | aswinijavadi160197.8_A,x.rustamov-m_18_41,0.391,97,100,58,0.97,0.97,first_round,0.37927,62.073 223 | x.rustamov.traj_9_8_model_1_0,USPTO:APO06211,0.415,106,119,61,0.891,0.891,uspto,0.369765,74.997965 224 | x.rustamov.traj_4_8_model_1_5,cchallacombe-dock_if3,0.364,118,119,74,0.992,0.975,first_round,0.3610879999999999,76.030528 225 | x.rustamov.traj_6_1_model_1_8,cchallacombe-dock_if3,0.396,106,119,63,0.891,0.876,first_round,0.352836,77.01251599999999 226 | allongoldberg.4_44,allongoldberg-17449’_33p/n(H),0.363,131,138,71,0.949,0.819,first_round,0.344487,90.460794 227 | qxy615.s1_rfd_base_46_94,alan.blakely-design:5,0.448,49,64,20,0.766,0.199,first_round,0.343168,42.037248 228 | klima.jason.8HGO_design_8gswy_1_2,USPTO:QPT87797,0.343,128,128,30,1.0,0.039,uspto,0.343,84.096 229 | x.rustamov.traj_11_8_model_5_0,6bfq_A,0.344,116,119,73,0.975,0.498,pdb,0.3354,79.0874 230 | klima.jason.8HGO_design_4yyaf_0_0,USPTO:ARH80552,0.328,134,134,31,1.0,0.044,uspto,0.328,90.04799999999999 231 | qxy615.s1_rfd_base_46_60,alan.blakely-design:5,0.428,49,64,21,0.766,0.199,first_round,0.327848,43.017728000000005 232 | ccalia.Paesani_Lab_design9,USPTO:UOL85950,0.446,183,242,95,0.711,0.327,uspto,0.317106,165.260348 233 | ccalia.Paesani_Lab_design3,USPTO:QPU09033,0.51,143,238,55,0.601,0.188,uspto,0.30651,165.05061999999998 234 | ccalia.Paesani_Lab_design8,USPTO:UOL85913,0.686,97,240,30,0.404,0.276,uspto,0.277144,173.48543999999998 235 | ccalia.Paesani_Lab_design1,USPTO:QPU09017,0.614,108,244,39,0.443,0.25,uspto,0.272002,177.631512 236 | ccalia.Paesani_Lab_design2,2khu_A,0.776,85,240,18,0.346,0.787,pdb,0.268496,175.56096 237 | christoph.gruber.Binder12_1,martin.pacesa-EGFR_l138_s90285_mpnn2,0.409,88,87,33,0.655,0.638,first_round,0.267895,63.693135 238 | qxy615.s1_rfd_comp_beta_782_81,alan.blakely-design:5,0.339,53,75,23,0.707,0.194,first_round,0.239673,57.024525 239 | qilin_y.test6,alan.blakely-design:5,0.392,56,93,21,0.602,0.188,first_round,0.235984,71.053488 240 | qilin_y.test4,gitter-yolo1,0.36,46,75,18,0.613,0.547,first_round,0.22068,58.449 241 | akash.arunabharathi.design4,USPTO:AZK09367,0.555,60,151,25,0.397,0.063,uspto,0.220335,117.729415 242 | akash.arunabharathi.design8,USPTO:AZK09367,0.53,63,155,27,0.406,0.063,uspto,0.21518,121.6471 243 | mlange05.C,martin.pacesa-EGFR_l138_s90285_mpnn2,0.396,103,195,42,0.528,0.514,first_round,0.209088,154.22784 244 | tarkhov.andrey.Erithacus_rubecula_gigantus_8,Q925F2,0.294,162,239,91,0.678,0.33,swissprot,0.199332,191.359652 245 | tarkhov.andrey.Erithacus_rubecula_gigantus_9,USPTO:AVD11581,0.231,215,241,158,0.855,0.478,uspto,0.197505,193.401295 246 | tarkhov.andrey.Erithacus_rubecula_gigantus_1,P13688,0.257,155,241,96,0.643,0.247,swissprot,0.165251,201.174509 247 | fernando.meireles.design_hybrid_partial_diff_4_31_binder,Motif0060_HHH_eva_0729_0001_0001_0001,0.586,29,107,12,0.271,0.547,baker,0.158806,90.007758 248 | akash.arunabharathi.design9,USPTO:AZK09367,0.539,60,217,26,0.276,0.063,uspto,0.148764,184.718212 249 | cameron.kroll.Gertrude_gen3,nside_mot_13d347bf58d8e49291c31bc16c4ec13b_0001_1_000000029_0001_34_39_H_._ems_3hM_3263_0001_0003_0001,0.488,43,147,22,0.293,0.672,baker,0.142984,125.981352 250 | cameron.kroll.Leitner,nside_mot_13d347bf58d8e49291c31bc16c4ec13b_0001_1_000000029_0001_34_39_H_._ems_3hM_3263_0001_0003_0001,0.488,43,147,22,0.293,0.672,baker,0.142984,125.981352 251 | klima.jason.8HGO_design_jt8s1_0_3_proteinmpnn_20,USPTO:AHE16438,0.705,34,172,10,0.198,0.036,uspto,0.13959,147.99052 252 | mlange05.A,martin.pacesa-EGFR_l138_s90285_mpnn2,0.913,23,194,2,0.119,0.167,first_round,0.108647,172.922482 253 | tarkhov.andrey.Erithacus_rubecula_gigantus_4,Q9QY61,0.96,25,247,1,0.101,0.049,swissprot,0.09696,223.05088 254 | -------------------------------------------------------------------------------- /LICENSE.md: -------------------------------------------------------------------------------- 1 | The contents of this repository are licensed under the 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-------------------------------------------------------------------------------- 1 | name,replicate,kd,kon,koff,binding_strength,binding,expression 2 | round1zeroshot.K5Q_N70S_K71R_N73T_S87T_N88D_R179K_K183R_E213D_S214P,1,1.42953973252244e-09,271121.019011126,0.000387578268998375,strong,true,high 3 | round1zeroshot.K5Q_N70S_K71R_N73T_S87T_N88D_R179K_K183R_E213D_S214P,2,8.36620278282774e-10,1933657.10468369,0.00161773674502393,strong,true,high 4 | round1zeroshot.K5Q_N70S_K71R_N73T_S87T_N88D_R179K_K183R_E213D_S214P,3,1.35529867147461e-09,513851.089156283,0.000696421698469293,strong,true,high 5 | chrisxushaoyong.hu_nano2_4_85252b,1,6.81364650495371e-09,65030.5061179021,0.000443094880725614,strong,true,high 6 | chrisxushaoyong.hu_nano2_4_85252b,2,3.55243521309065e-09,113392.771992576,0.000402820476136387,strong,true,high 7 | Cetuximab_scFv,1,9.94430540245231e-09,381459.213899841,0.0037933469215994,strong,true,low 8 | Cetuximab_scFv,1,3.33238529826027e-09,1514751.20718257,0.0050477346533372,strong,true,low 9 | chrisxushaoyong.hu_nano2_2_7ef96e,1,2.51656771697764e-08,16633.1379748323,0.000418584180594979,strong,true,high 10 | chrisxushaoyong.hu_nano2_2_7ef96e,2,1.07453585956752e-08,41008.1895172597,0.000440647701722365,strong,true,high 11 | aureliabustos.bce_var433,1,6.95861810611148e-08,35000.9981253105,0.00243558579286759,medium,true,high 12 | aureliabustos.bce_var433,2,3.35653498332694e-08,67232.5823298677,0.0022566851460961,strong,true,high 13 | aureliabustos.bce_var464,1,4.81601426051323e-08,31554.1541707543,0.00151965256464786,strong,true,high 14 | aureliabustos.bce_var464,2,7.06513035381173e-08,34843.0273348683,0.0024617053004227,medium,true,high 15 | aureliabustos.bce_var464,3,4.70044147711215e-08,90372.1915635156,0.00424789197602673,strong,true,high 16 | jvogt4.vogt_scFV_2470,1,7.49005531638492e-08,140699.507560355,0.0105384709461518,medium,true,high 17 | jvogt4.vogt_scFV_2470,2,8.57849337372312e-08,214679.749227277,0.0184162880621874,medium,true,medium 18 | lennart.nickel.EGFR_l179_s82283_mpnn1,1,9.15060704642848e-08,304444.766444794,0.0278585442507801,medium,true,high 19 | lennart.nickel.EGFR_l179_s82283_mpnn1,2,6.36610934163847e-08,444275.668786198,0.028283074853225,medium,true,high 20 | lennart.nickel.EGFR_l179_s82283_mpnn1,3,9.0978112299605e-08,515267.620163266,0.0468780754115639,medium,true,high 21 | aureliabustos.bce_var702,1,1.09136442107867e-07,36016.2126899762,0.00393068131118421,medium,true,high 22 | aureliabustos.bce_var702,2,1.10323962756225e-07,33483.7313403601,0.00369405792933333,medium,true,high 23 | jvogt4.vogt_scFV_0128,1,1.75219914624681e-07,44811.4002117261,0.00785184971931108,medium,true,high 24 | jvogt4.vogt_scFV_0128,2,1.75902544497863e-07,52390.7985281413,0.00921567476937495,medium,true,high 25 | jvogt4.vogt_scFV_0128,3,9.59567704344603e-08,120391.393772776,0.011552369334539,medium,true,high 26 | jvogt4.vogt_scFV_2009,1,1.35510099326804e-07,78242.3643272338,0.0106026305615474,medium,true,high 27 | jvogt4.vogt_scFV_2009,2,1.66348682357423e-07,45537.1745707918,0.00757504898813119,medium,true,high 28 | briannaughton.1_plus_EGFR,1,1.69011691425808e-07,27315.265537534,0.00461659923024369,medium,true,high 29 | briannaughton.1_plus_EGFR,2,1.47817970761584e-07,38929.0983211261,0.00575442031740705,medium,true,high 30 | briannaughton.1_plus_EGFR,3,2.48197848425803e-07,26963.9451252652,0.00669239316516225,medium,true,high 31 | alan.blakely.12_6,1,1.92632890457131e-07,34893.1104608752,0.00672156072511835,medium,true,high 32 | alan.blakely.12_6,2,1.7421127487487e-07,43762.81981551,0.00762397663217923,medium,true,high 33 | alan.blakely.12_6,3,2.84614327811063e-07,29987.6240128722,0.00853490745107449,medium,true,high 34 | chrisxushaoyong.hu_nano1_3_eef94e,1,1.3780108586372e-07,88773.3930176701,0.0122330699536417,medium,true,high 35 | chrisxushaoyong.hu_nano1_3_eef94e,2,2.60140290343038e-07,87617.7943622244,0.0227929184646057,medium,true,high 36 | chrisxushaoyong.hu_nano1_3_eef94e,3,3.16568964053794e-07,56369.9528195152,0.0178449775678351,medium,true,high 37 | begonia.sp.13.EGFR_l88_s11832_mpnn1_model2,1,1.93717128402166e-07,144358.191696712,0.0279646543568163,medium,true,high 38 | begonia.sp.13.EGFR_l88_s11832_mpnn1_model2,2,3.33506277819296e-07,64904.2869268971,0.0216459871475051,medium,true,high 39 | kurumida.yoichi.mg_05,1,3.60141149787504e-07,26875.040457889,0.00967880797108984,medium,true,high 40 | kurumida.yoichi.mg_05,2,1.22252076818139e-07,64090.7701258435,0.00783522975275829,medium,true,high 41 | kurumida.yoichi.mg_05,3,3.3277550040266e-07,22352.2435605951,0.00743827903599915,medium,true,medium 42 | alan.blakely.12_3,1,2.65155674920844e-07,34441.4003521033,0.00913233275558095,medium,true,high 43 | alan.blakely.12_3,2,2.80685619739205e-07,34323.6058102096,0.00963414256852286,medium,true,high 44 | youngsuko2000.queen,1,2.22005362943453e-07,31105.2504318771,0.00690553241157586,medium,true,high 45 | youngsuko2000.queen,2,2.86704424553073e-07,35451.1605622105,0.0101640045887272,medium,true,high 46 | youngsuko2000.queen,3,3.12101532346266e-07,31514.7754142627,0.0098358096983398,medium,true,high 47 | briannaughton.2_plus_1,1,2.29254198715352e-07,43508.7767209462,0.00997456974424568,medium,true,high 48 | briannaughton.2_plus_1,2,2.96880943379454e-07,44900.6260246353,0.0133301402125218,medium,true,high 49 | briannaughton.2_plus_1,3,3.26121054087426e-07,37699.1896692468,0.0122944994731766,medium,true,high 50 | briannaughton.1_plus_2,1,2.08008585817502e-07,49250.870235283,0.0102446038679225,medium,true,high 51 | briannaughton.1_plus_2,2,3.80177174926179e-07,22648.7672106138,0.00861054433369182,medium,true,high 52 | alan.blakely.16_2,1,2.8772642749833e-07,30293.0697334586,0.00871611673236584,medium,true,high 53 | alan.blakely.16_2,2,3.56064101083889e-07,24574.7338613,0.00875018052169958,medium,true,high 54 | stocco.filippo.1.3.3.18_4_2_iteration0_1.0407930462953479,1,2.60735169052438e-07,33471.5171817485,0.00872720169082478,medium,true,high 55 | stocco.filippo.1.3.3.18_4_2_iteration0_1.0407930462953479,2,3.95367028737232e-07,22484.4887855902,0.00888962552383441,medium,true,high 56 | stocco.filippo.1.3.3.18_65_0_iteration3_1.028317065130863,1,4.8080131308686e-07,35470.206098989,0.0170541216678555,medium,true,high 57 | stocco.filippo.1.3.3.18_65_0_iteration3_1.028317065130863,2,2.11078539136508e-07,87381.5640353264,0.0184443728840399,medium,true,high 58 | chuh.EGFR_Seg2_l58_s53469_mpnn1,1,3.68200414540052e-07,22970.1156915032,0.00845760611964444,medium,true,high 59 | chuh.EGFR_Seg2_l58_s53469_mpnn1,2,4.17735180969538e-07,21934.6340016669,0.00916286830418689,medium,true,high 60 | chuh.EGFR_Seg2_l58_s53469_mpnn1,3,3.9629446034907e-07,21190.9748150647,0.00839786592860682,medium,true,high 61 | jvogt4.vogt_scFV_2143,1,5.11805360969167e-07,304253.768511135,0.155718709819071,medium,true,medium 62 | jvogt4.vogt_scFV_2143,2,2.89489692428026e-07,49183.1184140976,0.0142380058223483,medium,true,high 63 | julian.faust.Pimurutamab_mpnn_17_scfv,1,7.20950792441029e-07,102689.210687852,0.0740338678205511,medium,true,high 64 | julian.faust.Pimurutamab_mpnn_17_scfv,2,3.8116136847522e-07,302461.066298058,0.115286473940642,medium,true,high 65 | youngsuko2000.ysar,1,4.94620879867442e-07,37678.4103471412,0.0186365284779095,medium,true,medium 66 | youngsuko2000.ysar,2,6.27383272661975e-07,35689.7362561084,0.0223911435328,medium,true,high 67 | Human_EGF,1,7.94905837385523e-07,68673.2123820484,0.0545887373945061,medium,true,high 68 | Human_EGF,2,7.25357123734121e-07,18198.9285365716,0.0132007224583304,medium,true,high 69 | Human_EGF,3,7.57378723902541e-07,18930.6598890843,0.0143376790294277,medium,true,high 70 | stocco.filippo.1.3.3.18_40_0_iteration12_1.0321554292304749,1,9.09783407194159e-07,21903.626907143,0.0199275563174902,medium,true,high 71 | stocco.filippo.1.3.3.18_40_0_iteration12_1.0321554292304749,2,7.29745079454099e-07,,,medium,true,medium 72 | a.tucs.Andrejs_Tucs_seq5,1,9.40741682930641e-07,115342.531613092,0.108507527303181,medium,true,high 73 | a.tucs.Andrejs_Tucs_seq5,2,8.63588094991556e-07,113476.223119651,0.0979967153507364,medium,true,high 74 | a.tucs.Andrejs_Tucs_seq5,3,7.04789004915153e-07,145595.724340719,0.102614265677997,medium,true,high 75 | a.tucs.Andrejs_Tucs_seq3,1,1.06870662400711e-06,23797.4352035926,0.0254324766364594,weak,true,high 76 | a.tucs.Andrejs_Tucs_seq3,2,1.15511253249397e-06,15813.9963106132,0.0182669453272027,weak,true,high 77 | a.tucs.Andrejs_Tucs_seq3,3,7.20957522216512e-07,26601.1029579955,0.0191782652768228,medium,true,high 78 | a.tucs.Andrejs_Tucs_seq8,1,1.37657584087527e-06,18048.9131738865,0.0248456978292275,weak,true,high 79 | a.tucs.Andrejs_Tucs_seq8,2,9.73329202966952e-07,40433.197725084,0.0393548121151612,medium,true,high 80 | a.tucs.Andrejs_Tucs_seq8,3,1.80093905502287e-06,47592.6987352689,0.0857115498862834,weak,true,high 81 | aureliabustos.wwt_noised_I_scaffold_shorted_var8423,1,1.25263809145282e-06,12295.5913287105,0.0154019260552798,weak,true,high 82 | aureliabustos.wwt_noised_I_scaffold_shorted_var8423,2,2.40669769538412e-06,9712.91491365797,0.0233760499381627,weak,true,high 83 | aureliabustos.wwt_noised_I_scaffold_shorted_var8423,3,1.00745738836048e-06,11484.2117423018,0.0115698539692782,weak,true,high 84 | aureliabustos.wwt_noised_I_scaffold_shorted_var7524,1,1.86605774015441e-06,22310.4240497782,0.0416325394842157,weak,true,high 85 | aureliabustos.wwt_noised_I_scaffold_shorted_var7524,2,1.39811847024702e-06,16941.7687715106,0.0236865998381031,weak,true,high 86 | aureliabustos.wwt_noised_I_scaffold_shorted_var9391,1,1.17242999311345e-06,25699.789791342,0.0301312043680803,weak,true,medium 87 | aureliabustos.wwt_noised_I_scaffold_shorted_var9391,2,1.88942586488596e-06,9020.90758947258,0.0170443361242955,weak,true,high 88 | aureliabustos.wwt_noised_I_scaffold_shorted_var9391,3,2.01479336684459e-06,10050.3827821959,0.0202494445638173,weak,true,high 89 | aureliabustos.wt_noised_I_scaffold_shorted_var71,1,3.34589544137509e-06,6477.39264232044,0.0216726785139365,weak,true,high 90 | aureliabustos.wt_noised_I_scaffold_shorted_var71,2,1.17928019920051e-06,9460.92461226083,0.011157081061368,weak,true,high 91 | aureliabustos.wt_noised_I_scaffold_shorted_var71,3,1.58122128250891e-06,15512.6720681685,0.0245289672227695,weak,true,high 92 | briannaughton.EGFR_plus_EGFR,1,3.895931438017e-06,5169.29091941906,0.0201392030052205,weak,true,high 93 | briannaughton.EGFR_plus_EGFR,2,1.16339763191728e-06,12259.671115013,0.0142628723432908,weak,true,high 94 | briannaughton.EGFR_plus_EGFR,3,1.3589629932886e-06,13596.2943852223,0.0184768609153746,weak,true,high 95 | joaosartori2.c1,1,4.1993899725317e-06,32208.0136354315,0.135254009495795,weak,true,high 96 | joaosartori2.c1,2,1.2157983399295e-06,15303.0990692731,0.0186054824441989,weak,true,medium 97 | joaosartori2.c1,3,1.28718177499984e-06,28878.9708058555,0.0371724849020496,weak,true,high 98 | julian.faust.Pimurutamab_mpnn_18_scfv,1,1.51131900109141e-06,117992.107362582,0.178323713835889,weak,true,high 99 | julian.faust.Pimurutamab_mpnn_18_scfv,2,3.10769157620071e-06,20483.2730029877,0.0636556949644044,weak,true,high 100 | a.tucs.Andrejs_Tucs_seq1,1,3.77254265517405e-06,35120.5965705599,0.132493948637597,weak,true,high 101 | a.tucs.Andrejs_Tucs_seq1,2,1.46773135464337e-06,36624.0098488878,0.0537542075879801,weak,true,high 102 | aureliabustos.wwt_noised_I_scaffold_shorted_var6640,1,2.18600328379404e-06,10692.5034674695,0.0233738476918675,weak,true,high 103 | aureliabustos.wwt_noised_I_scaffold_shorted_var6640,2,3.61690107315808e-06,4511.57522224075,0.016317921262956,weak,true,high 104 | kerrding.seq5,1,2.60165498864859e-06,15569.6515042167,0.0405068615074655,weak,true,high 105 | kerrding.seq5,2,3.87270346744446e-06,12090.0758349324,0.0468212786076092,weak,true,high 106 | deepsatflow.6aru_final_chain_A_domain_3_l142_s806907_mpnn1,1,3.5278128503097e-06,41514.1835815957,0.146454270309269,weak,true,high 107 | deepsatflow.6aru_final_chain_A_domain_3_l142_s806907_mpnn1,2,1e-05,,,weak,true,high 108 | a.tucs.Andrejs_Tucs_seq7,1,5.66626699899301e-06,3913.68157911789,0.0221759647763226,weak,true,high 109 | a.tucs.Andrejs_Tucs_seq7,2,3.51787203603744e-06,16257.760955533,0.0571927226340508,weak,true,high 110 | s1995825.cotimed_egf_netsolp_usability_5,1,8.16433586498211e-06,18106.9223362589,0.147830995434364,weak,true,high 111 | s1995825.cotimed_egf_netsolp_usability_5,2,8.41910209197583e-06,23755.5024057278,0.2,weak,true,high 112 | kerrding.seq6,1,1e-05,5162.47745031307,0.0516247745031307,weak,true,high 113 | kerrding.seq6,2,7.77719616047002e-06,5600.81803610577,0.0435586605258931,weak,true,high 114 | briannaughton.2_plus_2,1,1e-05,,,weak,true,high 115 | briannaughton.2_plus_2,2,1e-05,,,weak,true,high 116 | jvogt4.vogt_scFV_2279,1,1e-05,,,weak,true,medium 117 | jvogt4.vogt_scFV_2279,2,1e-05,,,weak,true,high 118 | gitter.yolo48,1,1e-05,,,weak,true,high 119 | gitter.yolo48,2,1e-05,,,weak,true,high 120 | alejandro.corrochano-navarro.eng_scfv_binder_2,1,1e-05,,,weak,true,high 121 | alejandro.corrochano-navarro.eng_scfv_binder_2,2,1e-05,,,weak,true,high 122 | "colby.TUPEGFR_012___anti-EGFR,_Fv-like_protein,_diffused_with_EvoDiff",1,1e-05,,,weak,true,low 123 | "colby.TUPEGFR_012___anti-EGFR,_Fv-like_protein,_diffused_with_EvoDiff",2,1e-05,,,weak,true,medium 124 | paulafcfranklin.synth_rosetta_1,1,1e-05,,,weak,true,high 125 | paulafcfranklin.synth_rosetta_1,2,1e-05,,,weak,true,high 126 | biolucasmachado.engineered_binder_1,1,1e-05,,,weak,true,high 127 | biolucasmachado.engineered_binder_1,2,1e-05,,,weak,true,high 128 | mosquitolkfo.nAb_design_3,1,1e-05,,,weak,true,medium 129 | mosquitolkfo.nAb_design_3,2,1e-05,,,weak,true,medium 130 | deepsatflow.6aru_final_chain_A_domain_3_l147_s945609_mpnn1,1,1e-05,,,weak,true,high 131 | deepsatflow.6aru_final_chain_A_domain_3_l147_s945609_mpnn1,2,1e-05,,,weak,true,high 132 | aswini.seed1,1,,,,none,false,high 133 | aswini.seed1,2,,,,none,false,high 134 | aswini.seed1,3,,,,none,false,high 135 | minji.lee.111,1,,,,none,false,high 136 | minji.lee.111,2,,,,none,false,high 137 | allongoldberg.3_52_1_refined,1,,,,none,false,high 138 | allongoldberg.3_52_1_refined,2,,,,none,false,high 139 | allongoldberg.3_52_1_refined,3,,,,none,false,high 140 | qxy615.s1_rfd_base_46_94,1,,,,none,false,high 141 | qxy615.s1_rfd_base_46_94,2,,,,none,false,high 142 | elian.elian2,1,,,,none,false,high 143 | elian.elian2,2,,,,none,false,high 144 | klima.jason.8HGO_design_4yyaf_0_0,1,,,,none,false,high 145 | klima.jason.8HGO_design_4yyaf_0_0,2,,,,none,false,high 146 | enzo.morro.design_0_n_0_mpnn_1.117_plddt_0.713_i_ptm_0.082_i_pae_27.542_rmsd_25.669,1,,,,none,false,high 147 | enzo.morro.design_0_n_0_mpnn_1.117_plddt_0.713_i_ptm_0.082_i_pae_27.542_rmsd_25.669,2,,,,none,false,high 148 | enzo.morro.design_0_n_0_mpnn_1.117_plddt_0.713_i_ptm_0.082_i_pae_27.542_rmsd_25.669,3,,,,none,false,high 149 | enzo.morro.design_0_n_1_mpnn_1.085_plddt_0.817_i_ptm_0.076_i_pae_28.084_rmsd_25.372,1,,,,none,false,high 150 | enzo.morro.design_0_n_1_mpnn_1.085_plddt_0.817_i_ptm_0.076_i_pae_28.084_rmsd_25.372,2,,,,none,false,high 151 | enzo.morro.design_0_n_1_mpnn_1.085_plddt_0.817_i_ptm_0.076_i_pae_28.084_rmsd_25.372,3,,,,none,false,high 152 | akash.arunabharathi.design4,1,,,,none,false,high 153 | akash.arunabharathi.design4,2,,,,none,false,high 154 | akash.arunabharathi.design4,3,,,,none,false,high 155 | jack.li.EGFRbindingCandidate_7,1,,,,none,false,high 156 | jack.li.EGFRbindingCandidate_7,2,,,,none,false,high 157 | christoph.gruber.UpperBinder_Scaffold2_LowerBinder,1,,,,none,false,high 158 | christoph.gruber.UpperBinder_Scaffold2_LowerBinder,2,,,,none,false,high 159 | nitesh.mishra3.stepwise_scaffold_egfr_binder_6,1,,,,none,false,high 160 | nitesh.mishra3.stepwise_scaffold_egfr_binder_6,2,,,,none,false,high 161 | joaosartori2.c6,1,,,,none,false,high 162 | joaosartori2.c6,2,,,,none,false,high 163 | biolucasmachado.engineered_binder_8,1,,,,none,false,high 164 | biolucasmachado.engineered_binder_8,2,,,,none,false,high 165 | praghava531.seq2,1,,,,none,false,high 166 | praghava531.seq2,2,,,,none,false,high 167 | tim.silica_corpora_sampled_epitope_2_generated_variant_9_rank_6_phase_2,1,,,,none,false,high 168 | tim.silica_corpora_sampled_epitope_2_generated_variant_9_rank_6_phase_2,2,,,,none,false,high 169 | cameron.kroll.Gertrude_gen6,1,,,,none,false,high 170 | cameron.kroll.Gertrude_gen6,2,,,,none,false,high 171 | cameron.kroll.Gertrude_gen6,3,,,,none,false,high 172 | klima.jason.8HGO_design_94eja_1_5,1,,,,none,false,high 173 | klima.jason.8HGO_design_94eja_1_5,2,,,,none,false,high 174 | areddy.EGFR_l169_s781475,1,,,,none,false,high 175 | areddy.EGFR_l169_s781475,2,,,,none,false,high 176 | markus.braun.egfr_binder_3,1,,,,none,false,high 177 | markus.braun.egfr_binder_3,2,,,,none,false,high 178 | markus.braun.egfr_binder_3,3,,,,none,false,high 179 | qxy615.s1_rfd_comp_beta_782_81,1,,,,none,false,high 180 | qxy615.s1_rfd_comp_beta_782_81,2,,,,none,false,high 181 | kerrding.seq9,1,,,,none,false,high 182 | kerrding.seq9,2,,,,none,false,high 183 | bronte.EGFR_Binder_4_91,1,,,,none,false,high 184 | bronte.EGFR_Binder_4_91,2,,,,none,false,high 185 | merlettaia.seq0v3,1,,,,none,false,high 186 | merlettaia.seq0v3,2,,,,none,false,high 187 | wtj19921231.egfr_binder_design_208_dldesign_0_cycle1_run5_af2pred.pdb_A,1,,,,none,false,high 188 | wtj19921231.egfr_binder_design_208_dldesign_0_cycle1_run5_af2pred.pdb_A,2,,,,none,false,high 189 | alessio.daddio.AD_9,1,,,,none,false,high 190 | alessio.daddio.AD_9,2,,,,none,false,high 191 | markus.braun.egfr_binder_1,1,,,,none,false,high 192 | markus.braun.egfr_binder_1,2,,,,none,false,high 193 | aswini.seed2_1,1,,,,none,false,high 194 | aswini.seed2_1,2,,,,none,false,high 195 | aswini.seed2_1,3,,,,none,false,high 196 | nicholas-schnicker.schnick_04,1,,,,none,false,high 197 | nicholas-schnicker.schnick_04,2,,,,none,false,high 198 | maxall4.EGFR_TRIM_l126_s498823_mpnn2_model1_unrelaxed_rank_001_alphafold2_multimer_v3_model_1_seed_000_top1_mutation_L39G_round1_Chain_A,1,,,,none,false,high 199 | maxall4.EGFR_TRIM_l126_s498823_mpnn2_model1_unrelaxed_rank_001_alphafold2_multimer_v3_model_1_seed_000_top1_mutation_L39G_round1_Chain_A,2,,,,none,false,high 200 | paulafcfranklin.synth_rosetta_3,1,,,,none,false,high 201 | paulafcfranklin.synth_rosetta_3,2,,,,none,false,high 202 | paulafcfranklin.synth_rosetta_5,1,,,,none,false,high 203 | paulafcfranklin.synth_rosetta_5,2,,,,none,false,high 204 | tim.silica_corpora_regions_sampled_epitope_0_generated_variant_6_rank_7_phase_2,1,,,,none,false,high 205 | tim.silica_corpora_regions_sampled_epitope_0_generated_variant_6_rank_7_phase_2,2,,,,none,false,high 206 | antorsae.TA_4_4,1,,,,none,false,high 207 | antorsae.TA_4_4,2,,,,none,false,high 208 | alex.naka.Charmeleon,1,,,,none,false,high 209 | alex.naka.Charmeleon,2,,,,none,false,high 210 | alex.naka.Charmeleon,3,,,,none,false,high 211 | paulafcfranklin.synth_rosetta_2,1,,,,none,false,high 212 | paulafcfranklin.synth_rosetta_2,2,,,,none,false,high 213 | paulafcfranklin.synth_rosetta_2,3,,,,none,false,high 214 | stocco.filippo.1.3.3.18_37_0_iteration3_1.024851931427025,1,,,,none,false,high 215 | stocco.filippo.1.3.3.18_37_0_iteration3_1.024851931427025,2,,,,none,false,high 216 | s1995825.cotimed_egf_netsolp_usability_2,1,,,,none,false,high 217 | s1995825.cotimed_egf_netsolp_usability_2,2,,,,none,false,high 218 | biolucasmachado.engineered_binder_5,1,,,,none,false,high 219 | biolucasmachado.engineered_binder_5,2,,,,none,false,high 220 | begonia.sp.13.EGFR_l110_s478327_mpnn7_model2,1,,,,none,false,high 221 | begonia.sp.13.EGFR_l110_s478327_mpnn7_model2,2,,,,none,false,high 222 | elian.elian1,1,,,,none,false,high 223 | elian.elian1,2,,,,none,false,high 224 | elian.elian5,1,,,,none,false,high 225 | elian.elian5,2,,,,none,false,high 226 | elian.elian5,3,,,,none,false,high 227 | klima.jason.8HGO_design_8gswy_1_2,1,,,,none,false,high 228 | klima.jason.8HGO_design_8gswy_1_2,2,,,,none,false,high 229 | klima.jason.8HGO_design_8gswy_1_2,3,,,,none,false,high 230 | julie.jg26n,1,,,,none,false,high 231 | julie.jg26n,2,,,,none,false,high 232 | qilin_y.test5,1,,,,none,false,high 233 | qilin_y.test5,2,,,,none,false,high 234 | julie.ryfqy,1,,,,none,false,high 235 | julie.ryfqy,2,,,,none,false,high 236 | huiyu.cai.H3_15_3351_H,1,,,,none,false,high 237 | huiyu.cai.H3_15_3351_H,2,,,,none,false,high 238 | huiyu.cai.H3_15_3351_H,3,,,,none,false,high 239 | begonia.sp.13.EGFR_l61_s456546_mpnn1_model1,1,,,,none,false,high 240 | begonia.sp.13.EGFR_l61_s456546_mpnn1_model1,2,,,,none,false,high 241 | elian.elian3,1,,,,none,false,high 242 | elian.elian3,2,,,,none,false,high 243 | elian.elian3,3,,,,none,false,high 244 | lyu.2,1,,,,none,false,high 245 | lyu.2,2,,,,none,false,high 246 | alessio.daddio.AD_1,1,,,,none,false,high 247 | alessio.daddio.AD_1,2,,,,none,false,high 248 | dre.LGDL_EGFR_008,1,,,,none,false,high 249 | dre.LGDL_EGFR_008,2,,,,none,false,high 250 | noah.holzleitner.Noah_EGFR-Binder_8,1,,,,none,false,high 251 | noah.holzleitner.Noah_EGFR-Binder_8,2,,,,none,false,high 252 | salireza111.Seq166_3_002_4,1,,,,none,false,high 253 | salireza111.Seq166_3_002_4,2,,,,none,false,high 254 | pastei5.egfr_binder_01,1,,,,none,false,high 255 | pastei5.egfr_binder_01,2,,,,none,false,high 256 | pastei5.egfr_binder_01,3,,,,none,false,high 257 | zhoup1366.DBZ7___A,1,,,,none,false,high 258 | zhoup1366.DBZ7___A,2,,,,none,false,high 259 | cameron.kroll.Gertrude_gen3,1,,,,none,false,high 260 | cameron.kroll.Gertrude_gen3,2,,,,none,false,high 261 | cameron.kroll.Gertrude_gen3,3,,,,none,false,high 262 | elian.elian4,1,,,,none,false,high 263 | elian.elian4,2,,,,none,false,high 264 | cbrown.cbrown_0005_2_EGFR_l81_s801188_mpnn1_model1,1,,,,none,false,high 265 | cbrown.cbrown_0005_2_EGFR_l81_s801188_mpnn1_model1,2,,,,none,false,high 266 | cbrown.cbrown_0005_2_EGFR_l81_s801188_mpnn1_model1,3,,,,none,false,high 267 | merlettaia.seq6v4,1,,,,none,false,high 268 | merlettaia.seq6v4,2,,,,none,false,high 269 | martin.EGFR_l142_s75963_mpnn1,1,,,,none,false,medium 270 | martin.EGFR_l142_s75963_mpnn1,2,,,,none,false,medium 271 | enzo.morro.design_0_n_2_mpnn_1.120_plddt_0.858_i_ptm_0.072_i_pae_28.117_rmsd_30.276,1,,,,none,false,high 272 | enzo.morro.design_0_n_2_mpnn_1.120_plddt_0.858_i_ptm_0.072_i_pae_28.117_rmsd_30.276,2,,,,none,false,high 273 | alex.naka.Venusaur,1,,,,none,false,medium 274 | alex.naka.Venusaur,2,,,,none,false,high 275 | alex.naka.Venusaur,3,,,,none,false,high 276 | x.rustamov.traj_9_8_model_1_0,1,,,,none,false,high 277 | x.rustamov.traj_9_8_model_1_0,2,,,,none,false,medium 278 | keaun.GWFGVVFKADIAGVSEKVAIELSGGYEGSLTTPSGWNQ,1,,,,none,false,high 279 | keaun.GWFGVVFKADIAGVSEKVAIELSGGYEGSLTTPSGWNQ,2,,,,none,false,medium 280 | keaun.GWFGVVFKADIARDSEFVAILESQGYLSSITTFSGWNQ,1,,,,none,false,medium 281 | keaun.GWFGVVFKADIARDSEFVAILESQGYLSSITTFSGWNQ,2,,,,none,false,high 282 | keaun.GWFGVVFKADIARDSEFVAILESQGYLSSITTFSGWNQ,3,,,,none,false,high 283 | zulfatmi.pocket1pep78,1,,,,none,false,medium 284 | zulfatmi.pocket1pep78,2,,,,none,false,medium 285 | julian.faust.BecotatugxPimurutamab_scfv,1,,,,none,false,medium 286 | julian.faust.BecotatugxPimurutamab_scfv,2,,,,none,false,high 287 | paulafcfranklin.synth_rosetta_9,1,,,,none,false,medium 288 | paulafcfranklin.synth_rosetta_9,2,,,,none,false,high 289 | tiejun.wei.egfr_binder_design_208_dldesign_10_af2pred.pdb_A,1,,,,none,false,high 290 | tiejun.wei.egfr_binder_design_208_dldesign_10_af2pred.pdb_A,2,,,,none,false,medium 291 | tiejun.wei.egfr_binder_design_208_dldesign_10_af2pred.pdb_A,3,,,,none,false,high 292 | salireza111.Seq166_7_003_9,1,,,,none,false,high 293 | salireza111.Seq166_7_003_9,2,,,,none,false,medium 294 | salireza111.Seq166_7_003_9,3,,,,none,false,high 295 | qilin_y.test4,1,,,,none,false,high 296 | qilin_y.test4,2,,,,none,false,medium 297 | joaosartori2.c3,1,,,,none,false,medium 298 | joaosartori2.c3,2,,,,none,false,high 299 | AmirM.MHosseini.seq4,1,,,,none,false,medium 300 | AmirM.MHosseini.seq4,2,,,,none,false,high 301 | AmirM.MHosseini.seq4,3,,,,none,false,high 302 | aswini.seed1_1,1,,,,none,false,medium 303 | aswini.seed1_1,2,,,,none,false,medium 304 | aswini.seed1_1,3,,,,none,false,high 305 | biolucasmachado.engineered_binder_2,1,,,,none,false,medium 306 | biolucasmachado.engineered_binder_2,2,,,,none,false,medium 307 | biolucasmachado.engineered_binder_2,3,,,,none,false,high 308 | alessio.daddio.AD_4,1,,,,none,false,medium 309 | alessio.daddio.AD_4,2,,,,none,false,medium 310 | alessio.daddio.AD_4,3,,,,none,false,high 311 | biolucasmachado.engineered_binder_6,1,,,,none,false,high 312 | biolucasmachado.engineered_binder_6,2,,,,none,false,medium 313 | biolucasmachado.engineered_binder_6,3,,,,none,false,high 314 | joaosartori2.c4,1,,,,none,false,medium 315 | joaosartori2.c4,2,,,,none,false,high 316 | AmirM.MHosseini.seq1,1,,,,none,false,medium 317 | AmirM.MHosseini.seq1,2,,,,none,false,high 318 | AmirM.MHosseini.seq1,3,,,,none,false,high 319 | biolucasmachado.engineered_binder_9,1,,,,none,false,medium 320 | biolucasmachado.engineered_binder_9,2,,,,none,false,medium 321 | biolucasmachado.engineered_binder_9,3,,,,none,false,high 322 | antorsae.TA525_0_0,1,,,,none,false,medium 323 | antorsae.TA525_0_0,2,,,,none,false,high 324 | antorsae.TA525_0_0,3,,,,none,false,high 325 | alecl.relaxedA,1,,,,none,false,high 326 | alecl.relaxedA,2,,,,none,false,medium 327 | alecl.relaxedA,3,,,,none,false,medium 328 | z_peplib.pepseq_design_8,1,,,,none,false,medium 329 | z_peplib.pepseq_design_8,2,,,,none,false,high 330 | revoli.mutated_nAb_5,1,,,,none,false,high 331 | revoli.mutated_nAb_5,2,,,,none,false,low 332 | duynth29.Duy_L111_mpnn14,1,,,,none,false,medium 333 | duynth29.Duy_L111_mpnn14,2,,,,none,false,high 334 | jakublala.epitope_1_30aa.pdb,1,,,,none,false,medium 335 | jakublala.epitope_1_30aa.pdb,2,,,,none,false,high 336 | jakublala.epitope_1_30aa.pdb,3,,,,none,false,high 337 | hughy.7om4_B_A_180_rnd1_v1_full,1,,,,none,false,medium 338 | hughy.7om4_B_A_180_rnd1_v1_full,2,,,,none,false,high 339 | hughy.7om4_B_A_180_rnd1_v1_full,3,,,,none,false,high 340 | alex.naka.Blastoise,1,,,,none,false,high 341 | alex.naka.Blastoise,2,,,,none,false,low 342 | alex.naka.Blastoise,3,,,,none,false,high 343 | alex.naka.Wartortle,1,,,,none,false,medium 344 | alex.naka.Wartortle,2,,,,none,false,high 345 | alex.naka.Wartortle,3,,,,none,false,high 346 | zhoup1366.DBZ6___A,1,,,,none,false,medium 347 | zhoup1366.DBZ6___A,2,,,,none,false,high 348 | qilin_y.test8,1,,,,none,false,medium 349 | qilin_y.test8,2,,,,none,false,high 350 | binom16.pocket2pep86,1,,,,none,false,medium 351 | binom16.pocket2pep86,2,,,,none,false,high 352 | binom16.pocket2pep86,3,,,,none,false,high 353 | biolucasmachado.engineered_binder_3,1,,,,none,false,high 354 | biolucasmachado.engineered_binder_3,2,,,,none,false,medium 355 | biolucasmachado.engineered_binder_3,3,,,,none,false,high 356 | tadaskluonis.cotimed_egf_BCseq_1,1,,,,none,false,low 357 | tadaskluonis.cotimed_egf_BCseq_1,2,,,,none,false,high 358 | tadaskluonis.cotimed_egf_BCseq_1,3,,,,none,false,high 359 | binom16.pocket1pep15,1,,,,none,false,medium 360 | binom16.pocket1pep15,2,,,,none,false,high 361 | binom16.pocket1pep15,3,,,,none,false,high 362 | chenceshi1105.steven_binder_design_l89_s48081_it100_mpnn4,1,,,,none,false,medium 363 | chenceshi1105.steven_binder_design_l89_s48081_it100_mpnn4,2,,,,none,false,medium 364 | tadaskluonis.cotimed_egf_BCseq_0,1,,,,none,false,medium 365 | tadaskluonis.cotimed_egf_BCseq_0,2,,,,none,false,high 366 | alex.naka.Charmander,1,,,,none,false,low 367 | alex.naka.Charmander,2,,,,none,false,high 368 | alex.naka.Charmander,3,,,,none,false,high 369 | alex.naka.Ivysaur,1,,,,none,false,high 370 | alex.naka.Ivysaur,2,,,,none,false,medium 371 | alex.naka.Ivysaur,3,,,,none,false,high 372 | a.tucs.Andrejs_Tucs_seq4,1,,,,none,false,medium 373 | a.tucs.Andrejs_Tucs_seq4,2,,,,none,false,high 374 | a.tucs.Andrejs_Tucs_seq4,3,,,,none,false,high 375 | keaun.GIFGVVFKADIARVSIDVAIDYSTGYLGSLTTFSGCNQ,1,,,,none,false,high 376 | keaun.GIFGVVFKADIARVSIDVAIDYSTGYLGSLTTFSGCNQ,2,,,,none,false,medium 377 | z_peplib.pepseq_design_9,1,,,,none,false,high 378 | z_peplib.pepseq_design_9,2,,,,none,false,medium 379 | revoli.mutated_nAb_9,1,,,,none,false,medium 380 | revoli.mutated_nAb_9,2,,,,none,false,high 381 | cchallacombe.4,1,,,,none,false,high 382 | cchallacombe.4,2,,,,none,false,medium 383 | eceiiitn786.8s2,1,,,,none,false,medium 384 | eceiiitn786.8s2,2,,,,none,false,high 385 | eceiiitn786.8s2,3,,,,none,false,high 386 | AmirM.MHosseini.seq9,1,,,,none,false,high 387 | AmirM.MHosseini.seq9,2,,,,none,false,medium 388 | amirmhosseini47.mohammad_seq2,1,,,,none,false,medium 389 | amirmhosseini47.mohammad_seq2,2,,,,none,false,medium 390 | "colby.TUPEGFR_001___anti-EGFR,_Fv-like_protein,_diffused_with_EvoDiff",1,,,,none,false,medium 391 | "colby.TUPEGFR_001___anti-EGFR,_Fv-like_protein,_diffused_with_EvoDiff",2,,,,none,false,medium 392 | toluwase.fatoki.Toluwase_Sequence6_112,1,,,,none,false,high 393 | toluwase.fatoki.Toluwase_Sequence6_112,2,,,,none,false,medium 394 | "colby.TUPEGFR_010___anti-EGFR,_Fv-like_protein,_diffused_with_EvoDiff",1,,,,none,false,medium 395 | "colby.TUPEGFR_010___anti-EGFR,_Fv-like_protein,_diffused_with_EvoDiff",2,,,,none,false,medium 396 | x.rustamov.traj_4_8_model_1_5,1,,,,none,false,high 397 | x.rustamov.traj_4_8_model_1_5,2,,,,none,false,medium 398 | hughy.7om4_B_A_33_rnd2_v2_full,1,,,,none,false,high 399 | hughy.7om4_B_A_33_rnd2_v2_full,2,,,,none,false,medium 400 | karmanyaaggarwal.DS003076,1,,,,none,false,high 401 | karmanyaaggarwal.DS003076,2,,,,none,false,medium 402 | karmanyaaggarwal.DS004729,1,,,,none,false,high 403 | karmanyaaggarwal.DS004729,2,,,,none,false,medium 404 | tarkhov.andrey.Erithacus_rubecula_gigantus_4,1,,,,none,false,high 405 | tarkhov.andrey.Erithacus_rubecula_gigantus_4,2,,,,none,false,high 406 | tarkhov.andrey.Erithacus_rubecula_gigantus_4,3,,,,none,false,medium 407 | hughy.7om4_B_A_17_rnd2_v2_full,1,,,,none,false,high 408 | hughy.7om4_B_A_17_rnd2_v2_full,2,,,,none,false,medium 409 | mosquitolkfo.nAb_design_9,1,,,,none,false,high 410 | mosquitolkfo.nAb_design_9,2,,,,none,false,medium 411 | cchallacombe.1,1,,,,none,false,medium 412 | cchallacombe.1,2,,,,none,false,high 413 | paulafcfranklin.synth_rosetta_7,1,,,,none,false,high 414 | paulafcfranklin.synth_rosetta_7,2,,,,none,false,high 415 | paulafcfranklin.synth_rosetta_7,3,,,,none,false,high 416 | akash.arunabharathi.design8,1,,,,none,false,high 417 | akash.arunabharathi.design8,2,,,,none,false,medium 418 | tarkhov.andrey.Erithacus_rubecula_gigantus_9,1,,,,none,false,high 419 | tarkhov.andrey.Erithacus_rubecula_gigantus_9,2,,,,none,false,high 420 | tarkhov.andrey.Erithacus_rubecula_gigantus_9,3,,,,none,false,medium 421 | merlettaia.seq70v3,1,,,,none,false,high 422 | merlettaia.seq70v3,2,,,,none,false,medium 423 | tarkhov.andrey.Erithacus_rubecula_gigantus_1,1,,,,none,false,high 424 | tarkhov.andrey.Erithacus_rubecula_gigantus_1,2,,,,none,false,medium 425 | darius.szablowski.EGFR_binder_3___ggggs_3_linked_top_binders_1_rev_and_2_rev,1,,,,none,false,high 426 | darius.szablowski.EGFR_binder_3___ggggs_3_linked_top_binders_1_rev_and_2_rev,2,,,,none,false,medium 427 | darius.szablowski.EGFR_binder_5___ggggs_3_linked_top_binders_1_and_2_efficiently_evolved_and_sapiens_evolved,1,,,,none,false,high 428 | darius.szablowski.EGFR_binder_5___ggggs_3_linked_top_binders_1_and_2_efficiently_evolved_and_sapiens_evolved,2,,,,none,false,medium 429 | cameron.kroll.Gertrude_gen3_S69D_N61E,1,,,,none,false,high 430 | cameron.kroll.Gertrude_gen3_S69D_N61E,2,,,,none,false,high 431 | cameron.kroll.Gertrude_gen3_S69D_N61E,3,,,,none,false,high 432 | huiyu.cai.H3_15_4373_H,1,,,,none,false,medium 433 | huiyu.cai.H3_15_4373_H,2,,,,none,false,high 434 | huiyu.cai.H3_15_4373_H,3,,,,none,false,medium 435 | toluwase.fatoki.Toluwase_Sequence3_119,1,,,,none,false,high 436 | toluwase.fatoki.Toluwase_Sequence3_119,2,,,,none,false,medium 437 | 724928537.DBZ6___A,1,,,,none,false,high 438 | 724928537.DBZ6___A,2,,,,none,false,medium 439 | karmanyaaggarwal.DS002542,1,,,,none,false,medium 440 | karmanyaaggarwal.DS002542,2,,,,none,false,medium 441 | klima.jason.8HGO_design_vdcjs_1_2,1,,,,none,false,medium 442 | klima.jason.8HGO_design_vdcjs_1_2,2,,,,none,false,high 443 | klima.jason.8HGO_design_vdcjs_1_2,3,,,,none,false,high 444 | qilin_y.test6,1,,,,none,false,high 445 | qilin_y.test6,2,,,,none,false,medium 446 | jude.wells.21.6b3s_necitumumab_fused_trimmed_task_98_iter_184,1,,,,none,false,high 447 | jude.wells.21.6b3s_necitumumab_fused_trimmed_task_98_iter_184,2,,,,none,false,medium 448 | silvia.toscani.B_EGFR_6,1,,,,none,false,high 449 | silvia.toscani.B_EGFR_6,2,,,,none,false,medium 450 | silvia.toscani.B_EGFR_6,3,,,,none,false,high 451 | jude.wells.21.panitumumab_fused_trimmed_crossbreed3,1,,,,none,false,medium 452 | jude.wells.21.panitumumab_fused_trimmed_crossbreed3,2,,,,none,false,high 453 | jude.wells.21.panitumumab_fused_trimmed_crossbreed3,3,,,,none,false,high 454 | lhallee.lhallee_128_driveid_3_4,1,,,,none,false,high 455 | lhallee.lhallee_128_driveid_3_4,2,,,,none,false,medium 456 | youngsuko2000.fast4,1,,,,none,false,medium 457 | youngsuko2000.fast4,2,,,,none,false,high 458 | niklas.EE4629A9-322F-48F0-884D-8F4418DB9BCE_l151_s241659642_mpnn11,1,,,,none,false,medium 459 | niklas.EE4629A9-322F-48F0-884D-8F4418DB9BCE_l151_s241659642_mpnn11,2,,,,none,false,high 460 | youngsuko2000.last,1,,,,none,false,medium 461 | youngsuko2000.last,2,,,,none,false,medium 462 | aswini.seed2_3,1,,,,none,false,high 463 | aswini.seed2_3,2,,,,none,false,high 464 | aswini.seed2_3,3,,,,none,false,high 465 | jude.wells.21.6b3s_necitumumab_fused_trimmed_task_89_iter_216,1,,,,none,false,medium 466 | jude.wells.21.6b3s_necitumumab_fused_trimmed_task_89_iter_216,2,,,,none,false,medium 467 | gitter.yolo23,1,,,,none,false,high 468 | gitter.yolo23,2,,,,none,false,medium 469 | gitter.yolo23,3,,,,none,false,high 470 | chuh.EGFR_Seg1_l58_s941869_mpnn2,1,,,,none,false,medium 471 | chuh.EGFR_Seg1_l58_s941869_mpnn2,2,,,,none,false,high 472 | julie.rj0aa,1,,,,none,false,high 473 | julie.rj0aa,2,,,,none,false,medium 474 | julie.rj0aa,3,,,,none,false,high 475 | biolucasmachado.engineered_binder_4,1,,,,none,false,medium 476 | biolucasmachado.engineered_binder_4,2,,,,none,false,high 477 | z_peplib.pepseq_design_6,1,,,,none,false,high 478 | z_peplib.pepseq_design_6,2,,,,none,false,medium 479 | antorsae.ta397unsafety_2,1,,,,none,false,medium 480 | antorsae.ta397unsafety_2,2,,,,none,false,high 481 | mosquitolkfo.nAb_design_7,1,,,,none,false,high 482 | mosquitolkfo.nAb_design_7,2,,,,none,false,medium 483 | zhoup1366.DBZ1___A,1,,,,none,false,high 484 | zhoup1366.DBZ1___A,2,,,,none,false,medium 485 | lhallee.lhallee_128_driveid_1_2,1,,,,none,false,high 486 | lhallee.lhallee_128_driveid_1_2,2,,,,none,false,medium 487 | paulafcfranklin.synth_rosetta_8,1,,,,none,false,high 488 | paulafcfranklin.synth_rosetta_8,2,,,,none,false,medium 489 | alex.naka.Charizard,1,,,,none,false,high 490 | alex.naka.Charizard,2,,,,none,false,high 491 | alex.naka.Charizard,3,,,,none,false,high 492 | antorsae.TA_5_2,1,,,,none,false,high 493 | antorsae.TA_5_2,2,,,,none,false,high 494 | antorsae.TA_5_2,3,,,,none,false,high 495 | paulafcfranklin.synth_rosetta_4,1,,,,none,false,high 496 | paulafcfranklin.synth_rosetta_4,2,,,,none,false,high 497 | noah.holzleitner.Noah_EGFR-Binder_4,1,,,,none,false,high 498 | noah.holzleitner.Noah_EGFR-Binder_4,2,,,,none,false,high 499 | coreyhowe99.corey82,1,,,,none,false,high 500 | coreyhowe99.corey82,2,,,,none,false,high 501 | duynth29.Duy_L111_mpnn14_L80M_L42M,1,,,,none,false,high 502 | duynth29.Duy_L111_mpnn14_L80M_L42M,2,,,,none,false,high 503 | Reed.HARRISON.model_56_119_0,1,,,,none,false,high 504 | Reed.HARRISON.model_56_119_0,2,,,,none,false,high 505 | bundit.b_s18.manbaritone_Seq3_EGFR-binder-70-100_beta_303_dldesign_6_Lenght=71,1,,,,none,false,high 506 | bundit.b_s18.manbaritone_Seq3_EGFR-binder-70-100_beta_303_dldesign_6_Lenght=71,2,,,,none,false,high 507 | bundit.b_s18.manbaritone_Seq3_EGFR-binder-70-100_beta_303_dldesign_6_Lenght=71,3,,,,none,false,high 508 | duynth29.Duy_L111_mpnn14_I36M__L80M_L42M,1,,,,none,false,high 509 | duynth29.Duy_L111_mpnn14_I36M__L80M_L42M,2,,,,none,false,high 510 | lennart.nickel.EGFR_l170_s20625_mpnn10,1,,,,none,false,high 511 | lennart.nickel.EGFR_l170_s20625_mpnn10,2,,,,none,false,high 512 | aswinijavadi160197.8_A,1,,,,none,false,high 513 | aswinijavadi160197.8_A,2,,,,none,false,high 514 | aswinijavadi160197.8_A,3,,,,none,false,high 515 | maxall4.EGFR_ED_BINDER_l134_s906486_mpnn2_model1_unrelaxed_rank_001_alphafold2_multimer_v3_model_1_seed_000_top1_mutation_G108S_round1_Y80D_Chain_A,1,,,,none,false,high 516 | maxall4.EGFR_ED_BINDER_l134_s906486_mpnn2_model1_unrelaxed_rank_001_alphafold2_multimer_v3_model_1_seed_000_top1_mutation_G108S_round1_Y80D_Chain_A,2,,,,none,false,high 517 | fernando.meireles.design_hybrid_partial_diff_4_31_binder,1,,,,none,false,high 518 | fernando.meireles.design_hybrid_partial_diff_4_31_binder,2,,,,none,false,high 519 | carson.vaux.Baker1_18,1,,,,none,false,high 520 | carson.vaux.Baker1_18,2,,,,none,false,high 521 | julian.faust.Demupitamab_mpnn_19_scfv,1,,,,none,false,high 522 | julian.faust.Demupitamab_mpnn_19_scfv,2,,,,none,false,high 523 | julian.faust.Demupitamab_mpnn_19_scfv,3,,,,none,false,high 524 | lennart.nickel.EGFR_l114_s69310_mpnn7,1,,,,none,false,high 525 | lennart.nickel.EGFR_l114_s69310_mpnn7,2,,,,none,false,high 526 | lennart.nickel.EGFR_l114_s69310_mpnn7,3,,,,none,false,high 527 | fgndd1.fg_seq1,1,,,,none,false,high 528 | fgndd1.fg_seq1,2,,,,none,false,high 529 | cchallacombe.6,1,,,,none,false,high 530 | cchallacombe.6,2,,,,none,false,high 531 | cchallacombe.6,3,,,,none,false,high 532 | niklas.E5A28FA3-3501-41C2-922C-EC848E0BC020_l81_s514858345_mpnn4,1,,,,none,false,high 533 | niklas.E5A28FA3-3501-41C2-922C-EC848E0BC020_l81_s514858345_mpnn4,2,,,,none,false,high 534 | flowuenne.nf-proteindesign_design7,1,,,,none,false,high 535 | flowuenne.nf-proteindesign_design7,2,,,,none,false,high 536 | qxy615.s1_rfd_base_46_60,1,,,,none,false,high 537 | qxy615.s1_rfd_base_46_60,2,,,,none,false,high 538 | qxy615.s1_rfd_base_46_60,3,,,,none,false,high 539 | fernando.meireles.design_hybrid_partial_diff_9_54_binder,1,,,,none,false,high 540 | fernando.meireles.design_hybrid_partial_diff_9_54_binder,2,,,,none,false,high 541 | jude.wells.21.panitumumab_fused_trimmed_task_12_iter_123,1,,,,none,false,high 542 | jude.wells.21.panitumumab_fused_trimmed_task_12_iter_123,2,,,,none,false,high 543 | chenceshi1105.steven_binder_design_l82_s44755_it100_mpnn6,1,,,,none,false,high 544 | chenceshi1105.steven_binder_design_l82_s44755_it100_mpnn6,2,,,,none,false,high 545 | chenceshi1105.steven_binder_design_l82_s44755_it100_mpnn6,3,,,,none,false,high 546 | zalavi.shortrustamov_GGG_zalavi3,1,,,,none,false,high 547 | zalavi.shortrustamov_GGG_zalavi3,2,,,,none,false,high 548 | allongoldberg.4_44_14_refined_IDEAL,1,,,,none,false,high 549 | allongoldberg.4_44_14_refined_IDEAL,2,,,,none,false,high 550 | joel.rf_diffusion_trim_3,1,,,,none,false,high 551 | joel.rf_diffusion_trim_3,2,,,,none,false,high 552 | akash.arunabharathi.design3,1,,,,none,false,high 553 | akash.arunabharathi.design3,2,,,,none,false,high 554 | duynth29.L88_MPNN5,1,,,,none,false,high 555 | duynth29.L88_MPNN5,2,,,,none,false,high 556 | duynth29.L88_MPNN5,3,,,,none,false,high 557 | darius.szablowski.EGFR_binder_4___ggggs_3_linked_top_binders_1_and_2_efficiently_evolved,1,,,,none,false,high 558 | darius.szablowski.EGFR_binder_4___ggggs_3_linked_top_binders_1_and_2_efficiently_evolved,2,,,,none,false,high 559 | allongoldberg.3_52,1,,,,none,false,high 560 | allongoldberg.3_52,2,,,,none,false,high 561 | martin.EGFR_l177_s77884_mpnn7,1,,,,none,false,high 562 | martin.EGFR_l177_s77884_mpnn7,2,,,,none,false,high 563 | qilin_y.test7,1,,,,none,false,high 564 | qilin_y.test7,2,,,,none,false,high 565 | s1995825.cotimed_egf_netsolp_usability_1,1,,,,none,false,high 566 | s1995825.cotimed_egf_netsolp_usability_1,2,,,,none,false,high 567 | s1995825.cotimed_egf_netsolp_usability_1,3,,,,none,false,high 568 | keaun.GWFGVVFKADIARVSEFVAIGLSTGPLGSESTFSIWRQ,1,,,,none,false,high 569 | keaun.GWFGVVFKADIARVSEFVAIGLSTGPLGSESTFSIWRQ,2,,,,none,false,high 570 | allongoldberg.4_44_0_refined,1,,,,none,false,high 571 | allongoldberg.4_44_0_refined,2,,,,none,false,high 572 | allongoldberg.4_44_0_refined,3,,,,none,false,high 573 | x.rustamov.traj_11_8_model_5_0,1,,,,none,false,high 574 | x.rustamov.traj_11_8_model_5_0,2,,,,none,false,high 575 | akash.arunabharathi.design10,1,,,,none,false,high 576 | akash.arunabharathi.design10,2,,,,none,false,high 577 | zalavi.zalavi3_mergedaltered_rustamov,1,,,,none,false,high 578 | zalavi.zalavi3_mergedaltered_rustamov,2,,,,none,false,high 579 | lhallee.lhallee_40_target_driveid_10,1,,,,none,false,high 580 | lhallee.lhallee_40_target_driveid_10,2,,,,none,false,high 581 | noah.holzleitner.Noah_EGFR-Binder_1,1,,,,none,false,high 582 | noah.holzleitner.Noah_EGFR-Binder_1,2,,,,none,false,high 583 | noah.holzleitner.Noah_EGFR-Binder_1,3,,,,none,false,high 584 | mlange05.A,1,,,,none,false,high 585 | mlange05.A,2,,,,none,false,high 586 | mlange05.A,3,,,,none,false,high 587 | darius.szablowski.EGFR_binder_2___ggggs_3_linked_top_binders_1_and_2,1,,,,none,false,high 588 | darius.szablowski.EGFR_binder_2___ggggs_3_linked_top_binders_1_and_2,2,,,,none,false,high 589 | lyu.1,1,,,,none,false,high 590 | lyu.1,2,,,,none,false,high 591 | lyu.3,1,,,,none,false,high 592 | lyu.3,2,,,,none,false,high 593 | lyu.3,3,,,,none,false,high 594 | rohith.mohan.model_67_69_2,1,,,,none,false,high 595 | rohith.mohan.model_67_69_2,2,,,,none,false,high 596 | rohith.mohan.model_67_69_2,3,,,,none,false,high 597 | bundit.b_s18.manbaritone_Seq6_EGFR-binder-70-100_beta_778_dldesign_0_Length=71,1,,,,none,false,high 598 | bundit.b_s18.manbaritone_Seq6_EGFR-binder-70-100_beta_778_dldesign_0_Length=71,2,,,,none,false,high 599 | junhee.park1999.EGFR_binder_7,1,,,,none,false,high 600 | junhee.park1999.EGFR_binder_7,2,,,,none,false,high 601 | zhoup1366.DBZ8___A,1,,,,none,false,high 602 | zhoup1366.DBZ8___A,2,,,,none,false,high 603 | amelie.schreiber.model_83_156_16,1,,,,none,false,high 604 | amelie.schreiber.model_83_156_16,2,,,,none,false,high 605 | salireza111.Seq206_1_001_6,1,,,,none,false,high 606 | salireza111.Seq206_1_001_6,2,,,,none,false,high 607 | junhee.park1999.EGFR_binder_9,1,,,,none,false,high 608 | junhee.park1999.EGFR_binder_9,2,,,,none,false,high 609 | nhaas.4,1,,,,none,false,high 610 | nhaas.4,2,,,,none,false,high 611 | darius.szablowski.EGFR_binder_1___top_binder_1,1,,,,none,false,high 612 | darius.szablowski.EGFR_binder_1___top_binder_1,2,,,,none,false,high 613 | chenceshi1105.steven_binder_design_l75_s60968_it100_mpnn0,1,,,,none,false,high 614 | chenceshi1105.steven_binder_design_l75_s60968_it100_mpnn0,2,,,,none,false,high 615 | maxall4.EGFR_ED_BINDER_l124_s860500_mpnn1_model1_unrelaxed_rank_001_alphafold2_multimer_v3_model_1_seed_000_top1_mutation_D81N_round1_Chain_A,1,,,,none,false,high 616 | maxall4.EGFR_ED_BINDER_l124_s860500_mpnn1_model1_unrelaxed_rank_001_alphafold2_multimer_v3_model_1_seed_000_top1_mutation_D81N_round1_Chain_A,2,,,,none,false,high 617 | maxall4.EGFR_ED_BINDER_l124_s860500_mpnn1_model1_unrelaxed_rank_001_alphafold2_multimer_v3_model_1_seed_000_top1_mutation_D81N_round1_Chain_A,3,,,,none,false,high 618 | deepsatflow.6aru_final_chain_A_domain_3_l138_s466479_mpnn9,1,,,,none,false,high 619 | deepsatflow.6aru_final_chain_A_domain_3_l138_s466479_mpnn9,2,,,,none,false,high 620 | salireza111.Seq166_1_001_7,1,,,,none,false,high 621 | salireza111.Seq166_1_001_7,2,,,,none,false,high 622 | bundit.b_s18.manbaritone_Seq5_EGFR-binder-70-100_beta_303_dldesign_1_Length=71,1,,,,none,false,high 623 | bundit.b_s18.manbaritone_Seq5_EGFR-binder-70-100_beta_303_dldesign_1_Length=71,2,,,,none,false,high 624 | junhee.park1999.EGFR_binder_6,1,,,,none,false,high 625 | junhee.park1999.EGFR_binder_6,2,,,,none,false,high 626 | junhee.park1999.EGFR_binder_6,3,,,,none,false,high 627 | spacecruiser42.d2_prompt_binder_t0.8_88,1,,,,none,false,high 628 | spacecruiser42.d2_prompt_binder_t0.8_88,2,,,,none,false,high 629 | christoph.gruber.UpperBinder_Scaffold3_LowerBinder,1,,,,none,false,high 630 | christoph.gruber.UpperBinder_Scaffold3_LowerBinder,2,,,,none,false,high 631 | amelie.schreiber.model_56_119_15,1,,,,none,false,high 632 | amelie.schreiber.model_56_119_15,2,,,,none,false,high 633 | spacecruiser42.d2_prompt_binder_t1.0_37,1,,,,none,false,high 634 | spacecruiser42.d2_prompt_binder_t1.0_37,2,,,,none,false,high 635 | spacecruiser42.d2_prompt_binder_t1.0_22,1,,,,none,false,high 636 | spacecruiser42.d2_prompt_binder_t1.0_22,2,,,,none,false,high 637 | spacecruiser42.d2_prompt_binder_t1.0_22,3,,,,none,false,high 638 | jakublala.epitope_2_30aa_1.pdb,1,,,,none,false,high 639 | jakublala.epitope_2_30aa_1.pdb,2,,,,none,false,high 640 | markus.braun.egfr_binder_6,1,,,,none,false,high 641 | markus.braun.egfr_binder_6,2,,,,none,false,high 642 | cameron.kroll.Leitner,1,,,,none,false,high 643 | cameron.kroll.Leitner,2,,,,none,false,high 644 | niklas.95B59203-B642-4754-BCD3-8E670A722C8D_l91_s349792600_mpnn19,1,,,,none,false,high 645 | niklas.95B59203-B642-4754-BCD3-8E670A722C8D_l91_s349792600_mpnn19,2,,,,none,false,high 646 | mchrnwsk.marta_chronowska_dom1_l99_s666690_mpnn16,1,,,,none,false,high 647 | mchrnwsk.marta_chronowska_dom1_l99_s666690_mpnn16,2,,,,none,false,high 648 | mchrnwsk.marta_chronowska_dom1_l99_s666690_mpnn16,3,,,,none,false,high 649 | chuh.EGFR_Seg2_l62_s244475_mpnn4,1,,,,none,false,high 650 | chuh.EGFR_Seg2_l62_s244475_mpnn4,2,,,,none,false,high 651 | tarkhov.andrey.Erithacus_rubecula_gigantus_7,1,,,,none,false,high 652 | tarkhov.andrey.Erithacus_rubecula_gigantus_7,2,,,,none,false,high 653 | tarkhov.andrey.Erithacus_rubecula_gigantus_7,3,,,,none,false,high 654 | niklas.7A72D922-1677-4FC8-9315-D7996BA05D8E_l150_s530325711_mpnn12,1,,,,none,false,high 655 | niklas.7A72D922-1677-4FC8-9315-D7996BA05D8E_l150_s530325711_mpnn12,2,,,,none,false,high 656 | niklas.7A72D922-1677-4FC8-9315-D7996BA05D8E_l150_s530325711_mpnn12,3,,,,none,false,high 657 | niklas.95B59203-B642-4754-BCD3-8E670A722C8D_l91_s349792600_mpnn2,1,,,,none,false,high 658 | niklas.95B59203-B642-4754-BCD3-8E670A722C8D_l91_s349792600_mpnn2,2,,,,none,false,high 659 | tim.silica_corpora_regions_sampled_epitope_2_generated_variant_8_rank_3_phase_2,1,,,,none,false,high 660 | tim.silica_corpora_regions_sampled_epitope_2_generated_variant_8_rank_3_phase_2,2,,,,none,false,high 661 | tim.silica_corpora_regions_sampled_epitope_2_generated_variant_8_rank_3_phase_2,3,,,,none,false,high 662 | noah.holzleitner.Noah_EGFR-Binder_2,1,,,,none,false,high 663 | noah.holzleitner.Noah_EGFR-Binder_2,2,,,,none,false,high 664 | noah.holzleitner.Noah_EGFR-Binder_2,3,,,,none,false,high 665 | gitter.yolo46,1,,,,none,false,high 666 | gitter.yolo46,2,,,,none,false,high 667 | gitter.yolo46,3,,,,none,false,high 668 | fernando.meireles.design_hybrid_partial_diff_7_1_binder,1,,,,none,false,high 669 | fernando.meireles.design_hybrid_partial_diff_7_1_binder,2,,,,none,false,high 670 | fernando.meireles.design_hybrid_partial_diff_7_1_binder,3,,,,none,false,high 671 | maxall4.EGFR_ED_BINDER_l134_s906486_mpnn2_model1_unrelaxed_rank_001_alphafold2_multimer_v3_model_1_seed_000_top1_mutation_G108S_round1_Chain_A,1,,,,none,false,high 672 | maxall4.EGFR_ED_BINDER_l134_s906486_mpnn2_model1_unrelaxed_rank_001_alphafold2_multimer_v3_model_1_seed_000_top1_mutation_G108S_round1_Chain_A,2,,,,none,false,high 673 | noah.holzleitner.Noah_EGFR-Binder_3,1,,,,none,false,high 674 | noah.holzleitner.Noah_EGFR-Binder_3,2,,,,none,false,high 675 | alejandro.corrochano-navarro.eng_scfv_binder_3,1,,,,none,false,high 676 | alejandro.corrochano-navarro.eng_scfv_binder_3,2,,,,none,false,high 677 | maxall4.EGFR_ED_BINDER_l132_s581930_mpnn1_model1_unrelaxed_rank_001_alphafold2_multimer_v3_model_1_seed_000_top1_mutation_R79A_round1_Chain_A,1,,,,none,false,high 678 | maxall4.EGFR_ED_BINDER_l132_s581930_mpnn1_model1_unrelaxed_rank_001_alphafold2_multimer_v3_model_1_seed_000_top1_mutation_R79A_round1_Chain_A,2,,,,none,false,high 679 | lennart.nickel.EGFR_l98_s70756_mpnn3,1,,,,none,false,high 680 | lennart.nickel.EGFR_l98_s70756_mpnn3,2,,,,none,false,high 681 | aswini.clipgen30,1,,,,none,false,high 682 | aswini.clipgen30,2,,,,none,false,high 683 | aswini.clipgen30,3,,,,none,false,high 684 | merlettaia.seq52v3,1,,,,none,false,high 685 | merlettaia.seq52v3,2,,,,none,false,high 686 | martin.EGFR_l165_s31019_mpnn3,1,,,,none,false,high 687 | martin.EGFR_l165_s31019_mpnn3,2,,,,none,false,high 688 | huiyu.cai.H3_15_877_H,1,,,,none,false,high 689 | huiyu.cai.H3_15_877_H,2,,,,none,false,high 690 | jakublala.epitope_1_20aa.pdb,1,,,,none,false,high 691 | jakublala.epitope_1_20aa.pdb,2,,,,none,false,high 692 | jakublala.epitope_1_20aa.pdb,3,,,,none,false,high 693 | minji.lee.3458,1,,,,none,false,high 694 | minji.lee.3458,2,,,,none,false,high 695 | ccalia.Paesani_Lab_design9,1,,,,none,false,high 696 | ccalia.Paesani_Lab_design9,2,,,,none,false,high 697 | ccalia.Paesani_Lab_design9,3,,,,none,false,high 698 | nitesh.mishra3.stepwise_rfdiff_egfr_binder_1,1,,,,none,false,high 699 | nitesh.mishra3.stepwise_rfdiff_egfr_binder_1,2,,,,none,false,high 700 | nitesh.mishra3.stepwise_rfdiff_egfr_binder_1,3,,,,none,false,high 701 | merlettaia.seq0v4,1,,,,none,false,high 702 | merlettaia.seq0v4,2,,,,none,false,high 703 | klima.jason.8HGO_design_jt8s1_0_3_proteinmpnn_20,1,,,,none,false,high 704 | klima.jason.8HGO_design_jt8s1_0_3_proteinmpnn_20,2,,,,none,false,high 705 | klima.jason.8HGO_design_jt8s1_0_3_proteinmpnn_20,3,,,,none,false,high 706 | cameron.kroll.Gertrude_gen5,1,,,,none,false,high 707 | cameron.kroll.Gertrude_gen5,2,,,,none,false,high 708 | cameron.kroll.Gertrude_gen5,3,,,,none,false,high 709 | paulafcfranklin.synth_rosetta_10,1,,,,none,false,high 710 | paulafcfranklin.synth_rosetta_10,2,,,,none,false,high 711 | paulafcfranklin.synth_rosetta_6,1,,,,none,false,high 712 | paulafcfranklin.synth_rosetta_6,2,,,,none,false,high 713 | paulafcfranklin.synth_rosetta_6,3,,,,none,false,high 714 | AmirM.MHosseini.seq3,1,,,,none,false,high 715 | AmirM.MHosseini.seq3,2,,,,none,false,high 716 | AmirM.MHosseini.seq3,3,,,,none,false,high 717 | s1995825.timed_egf_netsolp_usability_consensus_2,1,,,,none,false,high 718 | s1995825.timed_egf_netsolp_usability_consensus_2,2,,,,none,false,high 719 | s1995825.timed_egf_netsolp_usability_consensus_2,3,,,,none,false,high 720 | martin.EGFR_l121_s46924_mpnn18,1,,,,none,false,high 721 | martin.EGFR_l121_s46924_mpnn18,2,,,,none,false,high 722 | martin.EGFR_l121_s46924_mpnn18,3,,,,none,false,high 723 | a.tucs.Andrejs_Tucs_seq2,1,,,,none,false,high 724 | a.tucs.Andrejs_Tucs_seq2,2,,,,none,false,high 725 | a.tucs.Andrejs_Tucs_seq2,3,,,,none,false,high 726 | s1995825.cotimed_egf_netsolp_usability_7,1,,,,none,false,high 727 | s1995825.cotimed_egf_netsolp_usability_7,2,,,,none,false,high 728 | s1995825.cotimed_egf_netsolp_usability_7,3,,,,none,false,high 729 | a.tucs.Andrejs_Tucs_seq6,1,,,,none,false,high 730 | a.tucs.Andrejs_Tucs_seq6,2,,,,none,false,high 731 | nitesh.mishra3.stepwise_egf_based_egfr_binder_3,1,,,,none,false,high 732 | nitesh.mishra3.stepwise_egf_based_egfr_binder_3,2,,,,none,false,high 733 | nitesh.mishra3.stepwise_egf_based_egfr_binder_3,3,,,,none,false,high 734 | biolucasmachado.engineered_binder_7,1,,,,none,false,high 735 | biolucasmachado.engineered_binder_7,2,,,,none,false,high 736 | biolucasmachado.engineered_binder_7,3,,,,none,false,high 737 | stocco.filippo.1.3.3.18_51_2_iteration3_1.0356664070457622,1,,,,none,false,high 738 | stocco.filippo.1.3.3.18_51_2_iteration3_1.0356664070457622,2,,,,none,false,high 739 | a.tucs.Andrejs_Tucs_seq10,1,,,,none,false,high 740 | a.tucs.Andrejs_Tucs_seq10,2,,,,none,false,high 741 | markus.braun.egfr_binder_7,1,,,,none,false,high 742 | markus.braun.egfr_binder_7,2,,,,none,false,high 743 | alecl.unrelaxedA,1,,,,none,false,high 744 | alecl.unrelaxedA,2,,,,none,false,high 745 | alecl.unrelaxedA,3,,,,none,false,high 746 | antorsae.TA_4_5,1,,,,none,false,high 747 | antorsae.TA_4_5,2,,,,none,false,high 748 | antorsae.TA_4_5,3,,,,none,false,high 749 | a.tucs.Andrejs_Tucs_seq9,1,,,,none,false,high 750 | a.tucs.Andrejs_Tucs_seq9,2,,,,none,false,high 751 | a.tucs.Andrejs_Tucs_seq9,3,,,,none,false,high 752 | kerrding.seq7,1,,,,none,false,high 753 | kerrding.seq7,2,,,,none,false,high 754 | kerrding.seq7,3,,,,none,false,high 755 | tadaskluonis.cotimed_egf_BCseq_2,1,,,,none,false,high 756 | tadaskluonis.cotimed_egf_BCseq_2,2,,,,none,false,high 757 | markus.braun.egfr_binder_8,1,,,,none,false,high 758 | markus.braun.egfr_binder_8,2,,,,none,false,high 759 | markus.braun.egfr_binder_8,3,,,,none,false,high 760 | "antorsae.T=0.1,_sample=939,_score=0.9451,_global_score=1.3625,_seq_recovery=0.4250",1,,,,none,false,high 761 | "antorsae.T=0.1,_sample=939,_score=0.9451,_global_score=1.3625,_seq_recovery=0.4250",2,,,,none,false,high 762 | "antorsae.T=0.1,_sample=939,_score=0.9451,_global_score=1.3625,_seq_recovery=0.4250",3,,,,none,false,high 763 | antorsae.TA_5_1,1,,,,none,false,high 764 | antorsae.TA_5_1,2,,,,none,false,high 765 | antorsae.TA_5_1,3,,,,none,false,high 766 | tadej.satler.egfr_binder_3,1,,,,none,false,high 767 | tadej.satler.egfr_binder_3,2,,,,none,false,high 768 | antorsae.TA_5_3,1,,,,none,false,high 769 | antorsae.TA_5_3,2,,,,none,false,high 770 | antorsae.TA_5_3,3,,,,none,false,high 771 | stocco.filippo.1.3.3.18_13_0_iteration12_1.0279718223732435,1,,,,none,false,high 772 | stocco.filippo.1.3.3.18_13_0_iteration12_1.0279718223732435,2,,,,none,false,high 773 | stocco.filippo.1.3.3.18_13_0_iteration12_1.0279718223732435,3,,,,none,false,high 774 | alex.naka.Squirtle,1,,,,none,false,high 775 | alex.naka.Squirtle,2,,,,none,false,high 776 | alex.naka.Squirtle,3,,,,none,false,high 777 | qy.qilin.yu.10-13-21_sample267_complex_42_complex,1,,,,none,false,high 778 | qy.qilin.yu.10-13-21_sample267_complex_42_complex,2,,,,none,false,high 779 | x.rustamov.P_vhh_partial_1_32,1,,,,none,false,high 780 | x.rustamov.P_vhh_partial_1_32,2,,,,none,false,high 781 | x.rustamov.P_vhh_partial_1_32,3,,,,none,false,high 782 | tim.silica_corpora_sampled_epitope_0_generated_variant_8_rank_1_phase_2,1,,,,none,false,high 783 | tim.silica_corpora_sampled_epitope_0_generated_variant_8_rank_1_phase_2,2,,,,none,false,high 784 | baptiste.roelens.ognk,1,,,,none,false,high 785 | baptiste.roelens.ognk,2,,,,none,false,high 786 | baptiste.roelens.ognk,3,,,,none,false,high 787 | tim.silica_corpora_sampled_epitope_0_generated_variant_1_rank_8_phase_2,1,,,,none,false,high 788 | tim.silica_corpora_sampled_epitope_0_generated_variant_1_rank_8_phase_2,2,,,,none,false,high 789 | s1995825.cotimed_egf_netsolp_usability_4,1,,,,none,false,high 790 | s1995825.cotimed_egf_netsolp_usability_4,2,,,,none,false,high 791 | s1995825.cotimed_egf_netsolp_usability_6,1,,,,none,false,high 792 | s1995825.cotimed_egf_netsolp_usability_6,2,,,,none,false,high 793 | s1995825.cotimed_egf_netsolp_usability_6,3,,,,none,false,high 794 | s1995825.timed_egf_netsolp_usability_consensus_1,1,,,,none,false,high 795 | s1995825.timed_egf_netsolp_usability_consensus_1,2,,,,none,false,high 796 | s1995825.timed_egf_netsolp_usability_consensus_1,3,,,,none,false,high 797 | s1995825.cotimed_egf_netsolp_usability_3,1,,,,none,false,high 798 | s1995825.cotimed_egf_netsolp_usability_3,2,,,,none,false,high 799 | s1995825.cotimed_egf_netsolp_usability_3,3,,,,none,false,high 800 | kerrding.seq8,1,,,,none,false,high 801 | kerrding.seq8,2,,,,none,false,high 802 | kerrding.seq8,3,,,,none,false,high 803 | akash.arunabharathi.design9,1,,,,none,false,high 804 | akash.arunabharathi.design9,2,,,,none,false,high 805 | akash.arunabharathi.design9,3,,,,none,false,high 806 | jakublala.full_dibinder_45aa.pdb,1,,,,none,false,high 807 | jakublala.full_dibinder_45aa.pdb,2,,,,none,false,high 808 | s1995825.cotimed_egf_netsolp_usability_8,1,,,,none,false,high 809 | s1995825.cotimed_egf_netsolp_usability_8,2,,,,none,false,high 810 | s1995825.cotimed_egf_netsolp_usability_8,3,,,,none,false,high 811 | martin.EGFR_l111_s89744_mpnn1,1,,,,none,false,high 812 | martin.EGFR_l111_s89744_mpnn1,2,,,,none,false,high 813 | amelie.schreiber.model_60_151_9,1,,,,none,false,high 814 | amelie.schreiber.model_60_151_9,2,,,,none,false,high 815 | amelie.schreiber.model_60_151_9,3,,,,none,false,high 816 | spacecruiser42.d2_prompt_binder_t1.0_139,1,,,,none,false,high 817 | spacecruiser42.d2_prompt_binder_t1.0_139,2,,,,none,false,high 818 | spacecruiser42.d2_prompt_binder_t1.0_139,3,,,,none,false,high 819 | zulfatmi.pocket7pep42,1,,,,none,false,high 820 | zulfatmi.pocket7pep42,2,,,,none,false,high 821 | ccalia.Paesani_Lab_design8,1,,,,none,false,high 822 | ccalia.Paesani_Lab_design8,2,,,,none,false,high 823 | lhallee.lhallee_20_on_target_2000,1,,,,none,false,high 824 | lhallee.lhallee_20_on_target_2000,2,,,,none,false,high 825 | binom16.pocket7pep80,1,,,,none,false,high 826 | binom16.pocket7pep80,2,,,,none,false,high 827 | zalavi.zalavi3_GGG_shortpacesa,1,,,,none,false,high 828 | zalavi.zalavi3_GGG_shortpacesa,2,,,,none,false,high 829 | zalavi.zalavi3_GGG_shortpacesa,3,,,,none,false,high 830 | zhoup1366.DBZ10___A,1,,,,none,false,high 831 | zhoup1366.DBZ10___A,2,,,,none,false,high 832 | ccalia.Paesani_Lab_design3,1,,,,none,false,high 833 | ccalia.Paesani_Lab_design3,2,,,,none,false,high 834 | mlange05.C,1,,,,none,false,high 835 | mlange05.C,2,,,,none,false,high 836 | lhallee.lhallee_40_full_driveid_8_9,1,,,,none,false,high 837 | lhallee.lhallee_40_full_driveid_8_9,2,,,,none,false,high 838 | allongoldberg.3_52_10_refined_IDEAL,1,,,,none,false,high 839 | allongoldberg.3_52_10_refined_IDEAL,2,,,,none,false,high 840 | minji.lee.459,1,,,,none,false,high 841 | minji.lee.459,2,,,,none,false,high 842 | christoph.gruber.UpperBinder_XTEN_LowerBinder,1,,,,none,false,high 843 | christoph.gruber.UpperBinder_XTEN_LowerBinder,2,,,,none,false,high 844 | dre.LGDL_EGFR_001,1,,,,none,false,high 845 | dre.LGDL_EGFR_001,2,,,,none,false,high 846 | keaun.GAFPVVFKADIARVSEFVAIGPSTGYLGSLTTMSGVNQ,1,,,,none,false,high 847 | keaun.GAFPVVFKADIARVSEFVAIGPSTGYLGSLTTMSGVNQ,2,,,,none,false,high 848 | toluwase.fatoki.Toluwase_Sequence4_148,1,,,,none,false,high 849 | toluwase.fatoki.Toluwase_Sequence4_148,2,,,,none,false,high 850 | christoph.gruber.UpperBinder_Scaffold1_LowerBinder,1,,,,none,false,high 851 | christoph.gruber.UpperBinder_Scaffold1_LowerBinder,2,,,,none,false,high 852 | christoph.gruber.Binder12_1,1,,,,none,false,high 853 | christoph.gruber.Binder12_1,2,,,,none,false,high 854 | flowuenne.nf-proteindesign_design8,1,,,,none,false,high 855 | flowuenne.nf-proteindesign_design8,2,,,,none,false,high 856 | flowuenne.nf-proteindesign_design8,3,,,,none,false,high 857 | ssomani.17,1,,,,none,false,high 858 | ssomani.17,2,,,,none,false,high 859 | lennart.nickel.EGFR_l139_s63093_mpnn2,1,,,,none,false,high 860 | lennart.nickel.EGFR_l139_s63093_mpnn2,2,,,,none,false,high 861 | binom16.pocket3pep98,1,,,,none,false,high 862 | binom16.pocket3pep98,2,,,,none,false,high 863 | binom16.pocket3pep98,3,,,,none,false,high 864 | ccalia.Paesani_Lab_design1,1,,,,none,false,high 865 | ccalia.Paesani_Lab_design1,2,,,,none,false,high 866 | salireza111.Seq119_3_001_8,1,,,,none,false,high 867 | salireza111.Seq119_3_001_8,2,,,,none,false,high 868 | huiyu.cai.H3_15_2847_H,1,,,,none,false,high 869 | huiyu.cai.H3_15_2847_H,2,,,,none,false,high 870 | minji.lee.386,1,,,,none,false,high 871 | minji.lee.386,2,,,,none,false,high 872 | binom16.pocket2pep89,1,,,,none,false,high 873 | binom16.pocket2pep89,2,,,,none,false,high 874 | binom16.pocket2pep89,3,,,,none,false,high 875 | ccalia.Paesani_Lab_design2,1,,,,none,false,high 876 | ccalia.Paesani_Lab_design2,2,,,,none,false,high 877 | minji.lee.3995,1,,,,none,false,high 878 | minji.lee.3995,2,,,,none,false,high 879 | minji.lee.3995,3,,,,none,false,high 880 | 724928537.DBZ8___A,1,,,,none,false,high 881 | 724928537.DBZ8___A,2,,,,none,false,high 882 | Ali.RASOULI.intern.model_77_142_3,1,,,,none,false,high 883 | Ali.RASOULI.intern.model_77_142_3,2,,,,none,false,high 884 | Ali.RASOULI.intern.model_77_142_3,3,,,,none,false,high 885 | allongoldberg.4_44,1,,,,none,false,high 886 | allongoldberg.4_44,2,,,,none,false,high 887 | allongoldberg.4_44,3,,,,none,false,high 888 | spacecruiser42.d2_prompt_binder_t0.8_42,1,,,,none,false,high 889 | spacecruiser42.d2_prompt_binder_t0.8_42,2,,,,none,false,high 890 | jakublala.full_dibinder_45aa_2.pdb,1,,,,none,false,high 891 | jakublala.full_dibinder_45aa_2.pdb,2,,,,none,false,high 892 | huiyu.cai.H3_15_2431_H,1,,,,none,false,high 893 | huiyu.cai.H3_15_2431_H,2,,,,none,false,high 894 | huiyu.cai.H3_15_2431_H,3,,,,none,false,high 895 | duynth29.L148_MPNN1,1,,,,none,false,high 896 | duynth29.L148_MPNN1,2,,,,none,false,high 897 | duynth29.L148_MPNN1,3,,,,none,false,high 898 | flowuenne.nf-proteindesign_design10,1,,,,none,false,high 899 | flowuenne.nf-proteindesign_design10,2,,,,none,false,high 900 | mlange05.B,1,,,,none,false,high 901 | mlange05.B,2,,,,none,false,high 902 | zulfatmi.pocket2pep63,1,,,,none,false,high 903 | zulfatmi.pocket2pep63,2,,,,none,false,high 904 | zulfatmi.pocket2pep63,3,,,,none,false,high 905 | julian.faust.PimurutamabxBecotatug_scfv,1,,,,unknown,unknown,none 906 | julian.faust.PimurutamabxBecotatug_scfv,2,,,,unknown,unknown,none 907 | nhaas.3,1,,,,unknown,unknown,none 908 | nhaas.3,2,,,,unknown,unknown,none 909 | nhaas.6,1,,,,unknown,unknown,none 910 | nhaas.6,2,,,,unknown,unknown,none 911 | hughy.4krp_B_A_89_rnd3_full,1,,,,unknown,unknown,none 912 | hughy.4krp_B_A_89_rnd3_full,2,,,,unknown,unknown,none 913 | hughy.4krp_B_A_89_rnd3_full,3,,,,unknown,unknown,none 914 | nhaas.2,1,,,,unknown,unknown,none 915 | nhaas.2,2,,,,unknown,unknown,none 916 | nhaas.2,3,,,,unknown,unknown,none 917 | xiuming_li2015.Eureka_seq_4,1,,,,unknown,unknown,none 918 | xiuming_li2015.Eureka_seq_4,2,,,,unknown,unknown,none 919 | xiuming_li2015.Eureka_seq_4,3,,,,unknown,unknown,none 920 | jude.wells.21.6b3s_necitumumab_fused_trimmed_task_211_iter_150,1,,,,unknown,unknown,none 921 | jude.wells.21.6b3s_necitumumab_fused_trimmed_task_211_iter_150,2,,,,unknown,unknown,none 922 | tarkhov.andrey.Erithacus_rubecula_gigantus_8,1,,,,unknown,unknown,none 923 | tarkhov.andrey.Erithacus_rubecula_gigantus_8,2,,,,unknown,unknown,none 924 | xiuming_li2015.Eureka_seq_3,1,,,,unknown,unknown,none 925 | xiuming_li2015.Eureka_seq_3,2,,,,unknown,unknown,none 926 | xiuming_li2015.Eureka_seq_3,3,,,,unknown,unknown,none 927 | mosquitolkfo.nAb_design_6,1,,,,unknown,unknown,none 928 | mosquitolkfo.nAb_design_6,2,,,,unknown,unknown,none 929 | nhaas.8,1,,,,unknown,unknown,none 930 | nhaas.8,2,,,,unknown,unknown,none 931 | nhaas.8,3,,,,unknown,unknown,none 932 | chrisxushaoyong.hu_nano1_5_559c85,1,,,,unknown,unknown,none 933 | chrisxushaoyong.hu_nano1_5_559c85,2,,,,unknown,unknown,none 934 | chrisxushaoyong.hu_nano1_1_ff3e18,1,,,,unknown,unknown,none 935 | chrisxushaoyong.hu_nano1_1_ff3e18,2,,,,unknown,unknown,none 936 | alejandro.corrochano-navarro.eng_scfv_binder_1,1,,,,unknown,unknown,none 937 | alejandro.corrochano-navarro.eng_scfv_binder_1,2,,,,unknown,unknown,none 938 | revoli.mutated_nAb_8,1,,,,unknown,unknown,none 939 | revoli.mutated_nAb_8,2,,,,unknown,unknown,none 940 | mosquitolkfo.nAb_design_1,1,,,,unknown,unknown,none 941 | mosquitolkfo.nAb_design_1,2,,,,unknown,unknown,none 942 | hughy.7om4_B_A_8_rnd2_v2_full,1,,,,unknown,unknown,none 943 | hughy.7om4_B_A_8_rnd2_v2_full,2,,,,unknown,unknown,none 944 | "colby.TUPEGFR_006___anti-EGFR,_Fv-like_protein,_diffused_with_EvoDiff",1,,,,unknown,unknown,none 945 | "colby.TUPEGFR_006___anti-EGFR,_Fv-like_protein,_diffused_with_EvoDiff",2,,,,unknown,unknown,none 946 | x.rustamov.traj_6_1_model_1_8,1,,,,unknown,unknown,none 947 | x.rustamov.traj_6_1_model_1_8,2,,,,unknown,unknown,none 948 | "colby.TUPEGFR_018___anti-EGFR,_Fv-like_protein,_diffused_with_ESM3",1,,,,unknown,unknown,none 949 | "colby.TUPEGFR_018___anti-EGFR,_Fv-like_protein,_diffused_with_ESM3",2,,,,unknown,unknown,none 950 | "colby.TUPEGFR_018___anti-EGFR,_Fv-like_protein,_diffused_with_ESM3",3,,,,unknown,unknown,none 951 | xiuming_li2015.Eureka_seq_1,1,,,,unknown,unknown,none 952 | xiuming_li2015.Eureka_seq_1,2,,,,unknown,unknown,none 953 | 724928537.DBZ7___A,1,,,,unknown,unknown,none 954 | 724928537.DBZ7___A,2,,,,unknown,unknown,none 955 | --------------------------------------------------------------------------------