├── .DS_Store ├── .Rbuildignore ├── .gitignore ├── DESCRIPTION ├── NAMESPACE ├── R ├── TRADE.R ├── TRADE_bivariate.R └── TRADE_univariate.R ├── README.md ├── TRADEtools.Rproj ├── example ├── .DS_Store └── K562Essential_annot.txt ├── github_image_crop.jpg ├── github_image_crop.pdf ├── github_image_crop_dark.jpg ├── man └── TRADE.rd └── vignettes ├── TRADEtools-intro.Rmd ├── TRADEtools-intro.html └── TRADEtools-intro_files └── MathJax.js /.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/.DS_Store -------------------------------------------------------------------------------- /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/.gitignore -------------------------------------------------------------------------------- /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/NAMESPACE -------------------------------------------------------------------------------- /R/TRADE.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/R/TRADE.R -------------------------------------------------------------------------------- /R/TRADE_bivariate.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/R/TRADE_bivariate.R -------------------------------------------------------------------------------- /R/TRADE_univariate.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/R/TRADE_univariate.R -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/README.md -------------------------------------------------------------------------------- /TRADEtools.Rproj: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/TRADEtools.Rproj -------------------------------------------------------------------------------- /example/.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/example/.DS_Store -------------------------------------------------------------------------------- /example/K562Essential_annot.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/example/K562Essential_annot.txt -------------------------------------------------------------------------------- /github_image_crop.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/github_image_crop.jpg -------------------------------------------------------------------------------- /github_image_crop.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/github_image_crop.pdf -------------------------------------------------------------------------------- /github_image_crop_dark.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/github_image_crop_dark.jpg -------------------------------------------------------------------------------- /man/TRADE.rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/man/TRADE.rd -------------------------------------------------------------------------------- /vignettes/TRADEtools-intro.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/vignettes/TRADEtools-intro.Rmd -------------------------------------------------------------------------------- /vignettes/TRADEtools-intro.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/vignettes/TRADEtools-intro.html -------------------------------------------------------------------------------- /vignettes/TRADEtools-intro_files/MathJax.js: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ajaynadig/TRADEtools/HEAD/vignettes/TRADEtools-intro_files/MathJax.js --------------------------------------------------------------------------------