├── .github └── ISSUE_TEMPLATE │ ├── administrative.md │ ├── bug-report.md │ └── installation-issues.md ├── MyProjectName ├── Module05.Rmd ├── Module06.Rmd ├── Module07.Rmd ├── Module08.Rmd ├── MyProjectName.Rproj ├── data │ └── analyzedData.RData ├── images │ ├── CohMean_AllTasks.png │ ├── Conclusion_recommendation.jpg │ ├── DTI │ │ ├── left_cst.png │ │ ├── left_tr.png │ │ ├── left_uf.png │ │ ├── right_cst.png │ │ ├── right_tr.png │ │ └── right_uf.png │ ├── Factor Analysis.png │ ├── FolderStructure.png │ ├── RMarkdown - Citations.png │ ├── RMarkdown - Figures.png │ ├── abstract.jpg │ ├── figure1.png │ ├── figure2.png │ ├── introduction.jpg │ ├── lm_model equation.png │ ├── methods.png │ ├── p-values src xkcd.png │ ├── plot1.png │ ├── purpose_researchStatement.png │ ├── results_discussion.png │ └── summary-stats-hiding.jpg ├── manuscript.Rmd ├── manuscript.docx ├── misc │ └── forcats-cheatsheet.pdf ├── raw │ ├── ChAMP_Oncology.sav │ ├── NC_birth_data_edited.xls │ ├── data.csv │ ├── data.xlsx │ ├── dirty-data.xlsx │ ├── dirty_data-janitor.xlsx │ └── rawData.xlsx ├── scripts │ ├── analysis.R │ └── install.R └── styles │ ├── Citation Styles │ ├── american-physiological-society.csl │ └── spectroscopy-letters.csl │ ├── ExampleBibliography.bib │ ├── MyBibliography.bib │ └── template.docx └── README.md /.github/ISSUE_TEMPLATE/administrative.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alapo/Literate-Programming/HEAD/.github/ISSUE_TEMPLATE/administrative.md -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE/bug-report.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alapo/Literate-Programming/HEAD/.github/ISSUE_TEMPLATE/bug-report.md -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE/installation-issues.md: 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