├── .Rbuildignore ├── .github ├── FUNDING.yml └── workflows │ └── R-CMD-check.yaml ├── .gitignore ├── DESCRIPTION ├── LICENSE ├── NAMESPACE ├── R ├── RcppExports.R └── parDist.R ├── README.md ├── inst └── NEWS.Rd ├── man └── parDist.Rd ├── src ├── BinaryCount.h ├── CPPLINT.cfg ├── DistanceBinary.h ├── DistanceDTWFactory.cpp ├── DistanceDTWFactory.h ├── DistanceDTWGeneric.h ├── DistanceDist.h ├── DistanceFactory.cpp ├── DistanceFactory.h ├── IDistance.h ├── Makevars ├── Makevars.win ├── RcppExports.cpp ├── StepPattern.h ├── Util.cpp ├── Util.h └── parallelDist.cpp ├── tests ├── testthat.R └── testthat │ ├── helper.R │ ├── testMatrixCustomDistances.R │ ├── testMatrixDTWDistances.R │ ├── testMatrixDistances.R │ ├── testMatrixListDTWDistances.R │ └── testMatrixListDistances.R └── vignettes ├── .gitignore ├── parallelDist.Rnw └── parallelDist.bib /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.github/FUNDING.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/.github/FUNDING.yml -------------------------------------------------------------------------------- /.github/workflows/R-CMD-check.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/.github/workflows/R-CMD-check.yaml -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/.gitignore -------------------------------------------------------------------------------- /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/LICENSE -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/NAMESPACE -------------------------------------------------------------------------------- /R/RcppExports.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/R/RcppExports.R -------------------------------------------------------------------------------- /R/parDist.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/R/parDist.R -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/README.md -------------------------------------------------------------------------------- /inst/NEWS.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/inst/NEWS.Rd -------------------------------------------------------------------------------- /man/parDist.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/man/parDist.Rd -------------------------------------------------------------------------------- /src/BinaryCount.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/BinaryCount.h -------------------------------------------------------------------------------- /src/CPPLINT.cfg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/CPPLINT.cfg -------------------------------------------------------------------------------- /src/DistanceBinary.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/DistanceBinary.h -------------------------------------------------------------------------------- /src/DistanceDTWFactory.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/DistanceDTWFactory.cpp -------------------------------------------------------------------------------- /src/DistanceDTWFactory.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/DistanceDTWFactory.h -------------------------------------------------------------------------------- /src/DistanceDTWGeneric.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/DistanceDTWGeneric.h -------------------------------------------------------------------------------- /src/DistanceDist.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/DistanceDist.h -------------------------------------------------------------------------------- /src/DistanceFactory.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/DistanceFactory.cpp -------------------------------------------------------------------------------- /src/DistanceFactory.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/DistanceFactory.h -------------------------------------------------------------------------------- /src/IDistance.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/IDistance.h -------------------------------------------------------------------------------- /src/Makevars: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/Makevars -------------------------------------------------------------------------------- /src/Makevars.win: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/Makevars.win -------------------------------------------------------------------------------- /src/RcppExports.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/RcppExports.cpp -------------------------------------------------------------------------------- /src/StepPattern.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/StepPattern.h -------------------------------------------------------------------------------- /src/Util.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/Util.cpp -------------------------------------------------------------------------------- /src/Util.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/Util.h -------------------------------------------------------------------------------- /src/parallelDist.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/src/parallelDist.cpp -------------------------------------------------------------------------------- /tests/testthat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/tests/testthat.R -------------------------------------------------------------------------------- /tests/testthat/helper.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/tests/testthat/helper.R -------------------------------------------------------------------------------- /tests/testthat/testMatrixCustomDistances.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/tests/testthat/testMatrixCustomDistances.R -------------------------------------------------------------------------------- /tests/testthat/testMatrixDTWDistances.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/tests/testthat/testMatrixDTWDistances.R -------------------------------------------------------------------------------- /tests/testthat/testMatrixDistances.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/tests/testthat/testMatrixDistances.R -------------------------------------------------------------------------------- /tests/testthat/testMatrixListDTWDistances.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/tests/testthat/testMatrixListDTWDistances.R -------------------------------------------------------------------------------- /tests/testthat/testMatrixListDistances.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/tests/testthat/testMatrixListDistances.R -------------------------------------------------------------------------------- /vignettes/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/vignettes/.gitignore -------------------------------------------------------------------------------- /vignettes/parallelDist.Rnw: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/vignettes/parallelDist.Rnw -------------------------------------------------------------------------------- /vignettes/parallelDist.bib: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/alexeckert/parallelDist/HEAD/vignettes/parallelDist.bib --------------------------------------------------------------------------------