├── DESCRIPTION ├── LICENCE.md ├── NAMESPACE ├── R └── sample_processing.R ├── README.md ├── data-raw ├── ECLPSE_infographic.jpg ├── ECLPSE_infographic.png └── example_output │ └── 20230412_example_CRUK0484_output.tsv ├── data └── TRACERx_input.rda ├── man ├── calculate_ccf.Rd ├── calculate_purity.Rd ├── call_clonal.Rd ├── clonal_deconvolution.Rd ├── correct_new_CIN.Rd ├── extract_normalised_sd.Rd ├── outlier_test.Rd ├── power_calc.Rd └── remove_background_reads.Rd └── non-commercial-academic-license.docx /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/amf71/ECLIPSE/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /LICENCE.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/amf71/ECLIPSE/HEAD/LICENCE.md -------------------------------------------------------------------------------- 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