├── Containers ├── Dockerfile ├── README.md └── RHOSTS.def ├── Example ├── launch_High_order_TS.sh ├── launch_High_order_TS_with_edgesaving.sh └── launch_High_order_TS_with_scaffold.sh ├── Example_notebook └── Example_usage.ipynb ├── High_order_TS ├── README.md ├── requirements.txt ├── simplicial_multivariate.py └── utils.py ├── High_order_TS_with_scaffold ├── Holes.py ├── README.md ├── javaplex │ └── javaplex.jar ├── persistent_homology_calculation.py ├── requirements.txt ├── simplicial_multivariate.py └── utils.py ├── Julia_MTS_optimized ├── README.md ├── SimplicialTS │ ├── Manifest.toml │ ├── Project.toml │ ├── data │ │ └── TS_Schaefer60S_gsr_bp_z.mat │ └── src │ │ ├── SimplicialTS.jl │ │ └── precompile_simplicial.jl ├── compile_package.sh ├── example_launch_julia_HOindicators_only.sh ├── example_launch_julia_code_iterative.sh ├── example_launch_julia_code_parallel.sh └── simplicial_multivariate.jl ├── Kaneko_CLM ├── generate_couple_maps.py ├── generate_couple_maps_on_networks.py 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