├── .gitignore ├── Assets ├── Colab ipynb │ └── 3D_Med_Seg.ipynb ├── HPC Cluster Job │ └── job.sh ├── Model.png └── u-net-architecture.png ├── LICENSE ├── README.md ├── get_dataset.py ├── get_models.py ├── predict.py ├── requirements.txt └── train.py /.gitignore: -------------------------------------------------------------------------------- 1 | __pycache__ 2 | .DS_Store 3 | Data 4 | -------------------------------------------------------------------------------- /Assets/Colab ipynb/3D_Med_Seg.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ardamavi/3D-Medical-Segmentation-GAN/HEAD/Assets/Colab ipynb/3D_Med_Seg.ipynb -------------------------------------------------------------------------------- /Assets/HPC Cluster Job/job.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ardamavi/3D-Medical-Segmentation-GAN/HEAD/Assets/HPC Cluster Job/job.sh -------------------------------------------------------------------------------- /Assets/Model.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ardamavi/3D-Medical-Segmentation-GAN/HEAD/Assets/Model.png -------------------------------------------------------------------------------- /Assets/u-net-architecture.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ardamavi/3D-Medical-Segmentation-GAN/HEAD/Assets/u-net-architecture.png -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ardamavi/3D-Medical-Segmentation-GAN/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ardamavi/3D-Medical-Segmentation-GAN/HEAD/README.md -------------------------------------------------------------------------------- /get_dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ardamavi/3D-Medical-Segmentation-GAN/HEAD/get_dataset.py -------------------------------------------------------------------------------- /get_models.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ardamavi/3D-Medical-Segmentation-GAN/HEAD/get_models.py -------------------------------------------------------------------------------- /predict.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ardamavi/3D-Medical-Segmentation-GAN/HEAD/predict.py -------------------------------------------------------------------------------- /requirements.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ardamavi/3D-Medical-Segmentation-GAN/HEAD/requirements.txt -------------------------------------------------------------------------------- /train.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ardamavi/3D-Medical-Segmentation-GAN/HEAD/train.py --------------------------------------------------------------------------------