├── .gitignore ├── CoronavirusTools ├── Kernel │ └── CoronavirusTools.m ├── PacletInfo.m └── coronavirus-tools.nb ├── LICENSE ├── README.md ├── _config.yml ├── data-files ├── QHD43415_1-putative-protease_cleaned-ribbon.stl ├── QHD43415_1-putative-protease_cleaned-surf.stl ├── nCov_dataset.wl └── sequences.fasta ├── docs ├── dashboard-tools.nb ├── data │ ├── cases-by-country.csv │ ├── cases.csv │ └── wuhan-timeline.csv └── index.html ├── images ├── cases-by-country.png ├── confirmed-cases-02032020.png ├── confirmed-cases-02042020.png ├── confirmed-cases-log.png ├── confirmed-cases.png ├── coronavirus-2.png ├── coronavirus.png ├── electron-microscope-image.png ├── github-topic-wordcloud.png ├── hospital-capacity.gif ├── ncov-detailed.png ├── out.gif ├── province-graph.png ├── ribbon.png └── surface.png └── notebooks ├── README.md ├── china-province-graph.nb ├── coronavirus-art.nb ├── coronavirus-modeling.nb ├── data-gathering ├── bno-scraping-code.nb ├── cdc-media-images.nb └── who-situation-reports.nb ├── data-repository.nb ├── dna-sequence-analysis ├── dna-graphs.nb ├── fasta-sequences.nb └── genbank-sequence.nb ├── geographical-visualization ├── china-geographics.nb ├── coronavirus-plots.nb ├── geo-bubble-chart.nb └── geographical-data.nb ├── hospital-capacity-animation.nb ├── image-analysis └── Electron-microscope-image.nb ├── johns-hopkins-data.nb ├── molecular-visualization └── coronavirus-3d-models.nb ├── patient-medical-data-analysis.nb ├── repo-tools.nb ├── resourcedata-objects.nb ├── social-media-analysis ├── externalIdentifier-coronavirus.nb ├── github-repos.nb └── twitter-analysis.nb ├── third-party-notebooks └── Mapping_Wuhan_Coronavirus_in_China.nb ├── timeseries-analysis.nb └── us-state-level-departments-of-public-health.nb /.gitignore: -------------------------------------------------------------------------------- 1 | .idea -------------------------------------------------------------------------------- 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