├── .DS_Store ├── GetRWCData.R ├── Markdown ├── .DS_Store ├── RWCData.rda ├── RWCPrediction.Rmd ├── RWCPrediction.html ├── RWCPrediction.md ├── RWCPrediction_cache │ └── html │ │ ├── CompareModels1_bd4ad535045ab694022b6ea17c9d2f4c.RData │ │ ├── CompareModels1_bd4ad535045ab694022b6ea17c9d2f4c.rdb │ │ ├── CompareModels1_bd4ad535045ab694022b6ea17c9d2f4c.rdx │ │ ├── CompareModels2_a78d2b496876b42f242bcb1fe098fa58.RData │ │ ├── CompareModels2_a78d2b496876b42f242bcb1fe098fa58.rdb │ │ ├── CompareModels2_a78d2b496876b42f242bcb1fe098fa58.rdx │ │ ├── CorrelationHeatMap_4df2c304c0063ea1d30d365ed1be379b.RData │ │ ├── CorrelationHeatMap_4df2c304c0063ea1d30d365ed1be379b.rdb │ │ ├── CorrelationHeatMap_4df2c304c0063ea1d30d365ed1be379b.rdx │ │ ├── DataLoadAndSplit_6d7d8ab7c29c966e933ba165e175d42b.RData │ │ ├── DataLoadAndSplit_6d7d8ab7c29c966e933ba165e175d42b.rdb │ │ ├── DataLoadAndSplit_6d7d8ab7c29c966e933ba165e175d42b.rdx │ │ ├── ORFpls_1ee93baa36339bca0b90a1bc15c2e2d1.RData │ │ ├── ORFpls_1ee93baa36339bca0b90a1bc15c2e2d1.rdb │ │ ├── ORFpls_1ee93baa36339bca0b90a1bc15c2e2d1.rdx │ │ ├── RF_d0a500afb1324a0e8ecf769576b8572a.RData │ │ ├── RF_d0a500afb1324a0e8ecf769576b8572a.rdb │ │ ├── RF_d0a500afb1324a0e8ecf769576b8572a.rdx │ │ ├── ROCPlot_fe7c41f492858b0dbb8057f9dfdbd381.RData │ │ ├── ROCPlot_fe7c41f492858b0dbb8057f9dfdbd381.rdb │ │ ├── ROCPlot_fe7c41f492858b0dbb8057f9dfdbd381.rdx │ │ ├── ROC_2e068f536e04e1317a1ae8ad13799288.RData │ │ ├── ROC_2e068f536e04e1317a1ae8ad13799288.rdb │ │ ├── ROC_2e068f536e04e1317a1ae8ad13799288.rdx │ │ ├── SaveModels_c22d5b2c4b288c69645433a2cfe0321c.RData │ │ ├── SaveModels_c22d5b2c4b288c69645433a2cfe0321c.rdb │ │ ├── SaveModels_c22d5b2c4b288c69645433a2cfe0321c.rdx │ │ ├── TuningControl_ef8bd2db525caad2fd11fd192ca80bfc.RData │ │ ├── TuningControl_ef8bd2db525caad2fd11fd192ca80bfc.rdb │ │ ├── TuningControl_ef8bd2db525caad2fd11fd192ca80bfc.rdx │ │ ├── TuningPlots_5d2f8138a1303a4bb6f97140b8e58d59.RData │ │ ├── TuningPlots_5d2f8138a1303a4bb6f97140b8e58d59.rdb │ │ ├── TuningPlots_5d2f8138a1303a4bb6f97140b8e58d59.rdx │ │ ├── __packages │ │ ├── lmPlot_f4ba3e8472950295cfbb385d4e097d3a.RData │ │ ├── lmPlot_f4ba3e8472950295cfbb385d4e097d3a.rdb │ │ ├── lmPlot_f4ba3e8472950295cfbb385d4e097d3a.rdx │ │ ├── rrf_fd517681648b1388055fae511ce92fb2.RData │ │ ├── rrf_fd517681648b1388055fae511ce92fb2.rdb │ │ ├── rrf_fd517681648b1388055fae511ce92fb2.rdx │ │ ├── varImpPlot_7c8b14770b1eeff2222c2109ead36b22.RData │ │ ├── varImpPlot_7c8b14770b1eeff2222c2109ead36b22.rdb │ │ └── varImpPlot_7c8b14770b1eeff2222c2109ead36b22.rdx ├── RWCPrediction_files │ └── figure-html │ │ ├── CompareModels1-1.png │ │ ├── CompareModels1-2.png │ │ ├── CompareModels2-1.png │ │ ├── CorrelationHeatMap-1.png │ │ ├── OOBplot-1.png │ │ ├── ROCPlot-1.png │ │ ├── TuningPlots-1.png │ │ ├── TuningPlots-2.png │ │ ├── TuningPlots-3.png │ │ ├── lmPlot-1.png │ │ └── varImpPlot-1.png ├── figures │ ├── api.png │ ├── main.png │ ├── main2.png │ ├── 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