├── Dockerfile ├── LICENSE ├── Makefile.am ├── README.md ├── configure.ac ├── deps ├── Makefile.am ├── Makefile.inc └── samtools │ ├── Makefile.am │ └── defs.txt ├── mBamVector.c ├── mBamVector.h ├── mCommon.c ├── mCommon.h ├── mMatrix.c ├── mMatrix.h ├── make_readme.sh ├── msam.h ├── msam_coverage.c ├── msam_filter.c ├── msam_helper.c ├── msam_profile.c ├── msam_summary.c ├── msamtools.c ├── tests ├── functions.sh ├── regression_tests.sh └── tiny_aln.bam ├── versions.txt ├── zoeTools.c └── zoeTools.h /Dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/arumugamlab/msamtools/HEAD/Dockerfile -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/arumugamlab/msamtools/HEAD/LICENSE -------------------------------------------------------------------------------- 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