├── .gitignore ├── README.md ├── __init__.py ├── clip_dnote_label_threshs.npy ├── clip_ttp_label_threshs.npy ├── data ├── __init__.py ├── agreement.py ├── convert_json_to_csv.py ├── mimic_utils.py ├── models.py ├── tokenizers.py └── utils.py ├── dummy_test_data.csv ├── requirements.txt ├── sentclf ├── apply_bert_unlabeled.py ├── bert.py ├── bert_model.py ├── binary_eval.py ├── bow.py ├── cnn_embs.pkl ├── cnn_vocab.txt ├── constants.py ├── multilabel_eval.py ├── neural_baselines.py ├── plotting.py ├── pretrain_tasks.py ├── train_bert.sh ├── train_bert_context.sh ├── train_bow.sh ├── train_cnn.sh ├── train_mimic_dnote_bert.sh ├── train_mimic_dnote_bert_context.sh ├── train_mimic_full_bert.sh ├── train_mimic_full_bert_context.sh ├── train_pretrained_1m.sh ├── train_pretrained_250k.sh ├── train_pretrained_2m.sh └── train_pretrained_500k.sh └── test_load.py /.gitignore: -------------------------------------------------------------------------------- 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