├── .gitignore ├── CODE_OF_CONDUCT.md ├── CONTRIBUTING.md ├── LICENSE ├── README.md ├── cfn-template └── template.yaml ├── doc ├── config-deidentifier.md ├── config-orthanc.md ├── config-permissions.md ├── deploy-all-aws.md ├── deploy-others.md ├── detailed-architecture.md ├── dicom-instance-query.md ├── environment-variables.md ├── operate.md ├── pgsql-tables.md ├── releases.md ├── roadmap.md ├── screenshots.md ├── tag-path-pattern.md ├── tag-path.md └── user-guide.md ├── dockerfile ├── change-pooler.Dockerfile ├── de-identifier.Dockerfile ├── orthanc.Dockerfile ├── orthanc_s3.py ├── website-worker.Dockerfile └── website.Dockerfile ├── image ├── config-deidentifier.png ├── config-permissions.png ├── detailed-architecture.png ├── export-page-details.png ├── export-page.png ├── home-page.png ├── permissions-page-1.png ├── permissions-page-2.png ├── search-page-results.png ├── search-page.png ├── simplified-architecture.png └── stack-creation.png ├── python ├── change-pooler │ ├── research_pacs │ │ └── change_pooler │ │ │ ├── __main__.py │ │ │ ├── env.py │ │ │ └── main.py │ └── setup.py ├── de-identifier │ ├── research_pacs │ │ └── de_identifier │ │ │ ├── __main__.py │ │ │ ├── dicom.py │ │ │ ├── dicom_tag_path.py │ │ │ ├── dicom_tag_path_pattern.py │ │ │ ├── env.py │ │ │ ├── main.py │ │ │ └── ocr.py │ └── setup.py ├── shared │ ├── research_pacs │ │ └── shared │ │ │ ├── database.py │ │ │ ├── dicom_json.py │ │ │ ├── dicom_util.py │ │ │ ├── log.py │ │ │ ├── orthanc.py │ │ │ ├── util.py │ │ │ └── validation.py │ └── setup.py ├── website-worker │ ├── research_pacs │ │ └── website_worker │ │ │ ├── __main__.py │ │ │ ├── env.py │ │ │ └── main.py │ └── setup.py └── website │ ├── research_pacs │ └── website │ │ ├── __main__.py │ │ ├── env.py │ │ ├── log.py │ │ ├── main.py │ │ ├── permission.py │ │ └── templates │ │ ├── error.html │ │ ├── export.html │ │ ├── healthcheck.html │ │ ├── home.html │ │ ├── layout.html │ │ ├── me.html │ │ ├── preview.html │ │ ├── query_help.html 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