├── Dilated Convolution └── README.md ├── LICENSE └── README.md /Dilated Convolution/README.md: -------------------------------------------------------------------------------- 1 | # Atrous Convolution 2 | 3 | * As we add more number of convolution layers to the neural network, we enlarge receptive field of feature maps and capture long range contextual information of the image. However, while doing that, we need to reduce spatial resolution by max-pooling or striding. 4 | There are 2 main reasons for that: 5 | - Without striding and pooling, we cannot enlarge receptive field sufficiently and learn long range contextual features. 6 | - We need to decrease spatial size if we increase the number of channels to create a balance in terms of computational complexity. 7 | 8 | * This situation triggers 2 main problems: 9 | - Reduced resolution due to consecutive striding and max pooling causes important low level details to be lost, which affects 10 | segmentation of object boundaries and small scale pieces adversely. This is called as decimation of detailed information. 11 | - As we go deeper in neural networks, extracted features become more generalized and abstract, which is not useful to dense 12 | prediction tasks like segmentation. 13 | 14 | * Atrous convolution can solve both of these problems. By adding holes between filter weights, it enlarges filter kernels before 15 | convolution operation. The number of holes is controlled by dilation rate. This approach helps to extract denser feature maps and 16 | increase receptive field rapidly without any need of pooling or striding. 17 | 18 | * This means that we do not have to use max-pooling or striding in convolution layers for the rapid increase in receptive field, 19 | instead we can use dilated convolution. It can enlarge the receptive field with same proportion, but it can also preserve spatial 20 | resolution at the same time. 21 | 22 | * Apart from these, it also allows us to control how densely feature maps are computed in convolution backbone. At this point, the 23 | phrase *"the generation of dense/denser feature maps"* seems confusing, but this is related to the proportion of input resolution to 24 | final feature map resolution. Let's assume that input image is $256 \times 256$, and final feature maps to be fed into dense layer are 25 | of $16 \times 16$. In that case, the ratio is equal to $16$. If we apply one max-pooling and downsample it into $8 \times 8$ maps, 26 | spatial density of new feature responses would be lower. Hence, denser features can be interpreted as smaller input-output spatial 27 | ratio. 28 | 29 |

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32 | 33 | * The usage of atrous convolution with spatial pyramid pooling, called as ASPP module, was proposed in DeepLabV2, but it was also incorporated in next version, which is DeepLabV3. Atrous convolution layers in this module are initialized with different dilation 34 | rates and applied in parallel to capture multi-scale information. Detection and segmentation of objects at multiple scales are some issues encountered in deep convolution architectures. ASPP module is capable of extracting multi-scale context, so can alleviate this problem. 35 | 36 | ## ResNet Summary: 37 | 38 | * All ResNet architectures of version-1 start with a convolution layer of $7 \times 7$ kernel and $3 \times 3$ max-pooling. Both of them downsample the image by stride of $2$. At the end of these two layers, the proportion of input resolution to extracted feature maps becomes $4$. 39 | 40 | * Then, $4$ convolutional blocks come in. The structure and the size of filters in these blocks tend to vary depending on type of ResNet architecture. In ResNet-18/34, each block accomodates $2$ number $3 \times 3$ convolution layers, whereas larger ResNet models uses bottleneck-block of $3$ consecutive convolution layers. 41 | 42 | * The common thing that all Res-Net variations have is that feature map resolution is reduced by half per block. In this case, the output of entire network has $64$ input-output resolution ratio. 43 | 44 | ## DeepLabV3 45 | 46 | * DeepLabV3 actually relies on the combination of ResNet and ASPP module to alleviate its reduced feature map resolution problem. ASPP module consists of $4$ parallel convolution layers followed by batch-norm and relu activation. First $3$ of these layers utilizes $3 \times 3$ kernel with dilation rate of $6$, $12$, and $18$, whereas last convolution adopts $1 \times 1$ kernel. For all of them, $256$ filters are used with same padding. 47 | 48 | * The main problem in ASPP module is the degeneration: As dilation rate gets larger, filter weights of its convolution layers are surpassed. In other words, fewer number of kernel weights are applied to valid image context. This is expressed in the paper with the following words: *"As sampling rate becomes larger, the number of valid filter weights (the weights that are applied to valid feature region instead of padded zeros) becomes smaller"*. To solve this problem and cover global feature representatives to model, we insert image pooling module aside ASPP module, which is composed of average pooling, 1x1 convolution with 256 filters, batch-norm layer and upsampling operator. 49 | 50 |

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If not, see . 649 | 650 | Also add information on how to contact you by electronic and paper mail. 651 | 652 | If the program does terminal interaction, make it output a short 653 | notice like this when it starts in an interactive mode: 654 | 655 | Copyright (C) 656 | This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'. 657 | This is free software, and you are welcome to redistribute it 658 | under certain conditions; type `show c' for details. 659 | 660 | The hypothetical commands `show w' and `show c' should show the appropriate 661 | parts of the General Public License. Of course, your program's commands 662 | might be different; for a GUI interface, you would use an "about box". 663 | 664 | You should also get your employer (if you work as a programmer) or school, 665 | if any, to sign a "copyright disclaimer" for the program, if necessary. 666 | For more information on this, and how to apply and follow the GNU GPL, see 667 | . 668 | 669 | The GNU General Public License does not permit incorporating your program 670 | into proprietary programs. If your program is a subroutine library, you 671 | may consider it more useful to permit linking proprietary applications with 672 | the library. If this is what you want to do, use the GNU Lesser General 673 | Public License instead of this License. But first, please read 674 | . 675 | -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- 1 | # Deep Learning Tips & Tricks 2 | 3 | 4 | **Architecture Design and Basics:** 5 | - Choose an appropriate architecture based on the problem: CNNs for image tasks, RNNs/LSTMs/GRUs for sequential data, Transformers for sequences and attention-based tasks, etc. 6 | - Start with simpler architectures and gradually increase complexity if needed. 7 | - Model selection should be driven by the size of your dataset, available resources, and problem domain. 8 | 9 | **Convolutional Neural Networks (CNNs):** 10 | - Larger filter sizes (7x7, 5x5) capture more complex features but are computationally expensive. 11 | - Smaller filter sizes (3x3) with multiple layers can achieve similar receptive fields with fewer parameters. 12 | - Padding helps retain spatial dimensions and is essential for preserving information at the edges. 13 | 14 | **Smaller or Larger Kernel Size in CNNs:** 15 | 16 | - Convolution layers with 5x5 or 7x7 kernels tend to increase receptive field faster than their 3x3 versions. However, 17 | many state of the art architectures prefer to use 3x3 convolution layers. To reach enough receptive field compared to 18 | larger kernels, they generally deploy multiple layers. In the below, you can see the receptive field covered by convolution 19 | layers with different kernel sizes 20 | 21 | - Receptive Field Comparison: 22 | * 2 consecutive 3x3 conv layers = 1 5x5 conv layer 23 | * 3 consecutive 3x3 conv layers = 1 7x7 Conv Layer 24 | 25 | - In fact, using multiple conv layers with small kernel instead of single layer with larger kernel introduces some advantages: 26 | 27 | * Going through multiple non-linear activations instead of single one, this makes decision function in the model more 28 | discriminative 29 | 30 | * Number of parameters and computations would be decreased in small kernels. Working with larger kernels especially in 31 | 3D domain like medical imaging is a bad decision. Small kernels are highly recommended at this point. 32 | 33 | 34 | **Receptive Field and Layer Depth:** 35 | - Decide the number of layers based on the problem's complexity and desired receptive field. 36 | - Receptive field ratio guides the depth of the network, balancing between local and global features. 37 | 38 | **Striding and Pooling:** 39 | - Strided convolution and pooling operations help to increase receptive field, thereby learning long-range dependencies. 40 | - While doing these, they also reduce spatial dimension of input. In that way, computational cost would be decreased. 41 | - However, reduced feature maps start to loose fine-grained information (low-level details) like boundaries and edges of organs. 42 | This decreases the quality of segmentation; hence, using skip connection can be good alternative to handle this problem. 43 | 44 | **Multi-Scale Input Processing:** 45 | 46 | - Multi-scale input processing provides a way to look at and investigate the input image from two different perspectives. 47 | - In this scheme, input image is convolved with two parallel convolution pathways just like in siamese architectures. 48 | - While the first pathway operates on input image in normal resolution, which extracts detailed local appearance based features, 49 | the second branch processes same image in smaller size to come up with high level, more generalized features. 50 | - *Reference Paper:* "Efficient multi-scale 3D CNN with fully connected CRF for accurate brain lesion segmentation" 51 | 52 | **Atrous (Dilated) Convolutions:** 53 | - Atrous convolution is capable of increasing receptive field of feature maps without reducing resolution, so it is suitable for retaining fine-grained details in segmentation tasks. 54 | 55 | **Pooling and Segmentation:** 56 | - Pooling extracts geometrically invariant features but might affect segmentation tasks negatively. 57 | - Skip connections help preserve spatial details while still leveraging hierarchical features. 58 | 59 | **Batch Normalization (Batch-Norm):** 60 | - Batch normalization stabilizes training by normalizing inputs to each layer, improving convergence and generalization. 61 | - Usually placed before activation functions (convolution, ReLU) for better performance. 62 | 63 | **Depth-wise Separable Convolutions:** 64 | - Depth-wise separable convolutions reduce computational complexity by splitting spatial and channel convolutions. 65 | - Suitable for scenarios with limited computational resources. 66 | 67 | **Attention Mechanisms:** 68 | 69 | - Attention mechanisms enhance model performance by focusing on relevant parts of the input sequence or image. 70 | - Self-attention mechanisms are particularly useful for capturing long-range dependencies. 71 | 72 | 73 | **Gradient Clipping:** 74 | 75 | - Gradient clipping prevents exploding gradients during training by capping gradient values. 76 | 77 | 78 | **Learning Rate Annealing:** 79 | 80 | - Gradually reduce the learning rate during training to fine-tune model convergence. 81 | - Techniques like step decay, cosine annealing, and one-cycle learning rates can be beneficial. 82 | 83 | **Normalization Techniques:** 84 | 85 | - Apart from batch normalization, explore layer normalization and instance normalization for different scenarios. 86 | - Normalization techniques help stabilize training and improve generalization. 87 | 88 | **Label Smoothing:** 89 | 90 | - Introduce a small amount of noise to ground-truth labels to prevent the model from becoming overconfident in predictions. 91 | - Label smoothing can lead to better generalization and calibration of model probabilities. 92 | 93 | **One-Shot Learning:** 94 | 95 | - Develop models that can learn from just a few examples, which is particularly useful for tasks with limited training data. 96 | - Siamese networks and metric learning techniques can be employed for one-shot learning. 97 | 98 | **Zero-Shot Learning:** 99 | 100 | - Zero-shot learning involves training a model to recognize classes it has never seen during training. 101 | - This is achieved by leveraging auxiliary information or semantic embeddings. 102 | 103 | 104 | **SPP Layer (Spatial Pyramid Pooling):** 105 | - SPP layers capture information at multiple scales, improving object detection by handling various object sizes. 106 | 107 | **Residual Networks (ResNets) and Skip Connections:** 108 | - Residual connections facilitate gradient flow and alleviate vanishing gradient issues. 109 | - Skip connections help build deeper networks without suffering from degradation problems. 110 | 111 | **Topological and Geometric Insights:** 112 | - Understand the topology of the data to guide architecture design. 113 | - Geometric invariance might not always be desirable, especially in tasks like segmentation. 114 | 115 | **Backpropagation and Optimization:** 116 | - Use activation functions (ReLU, Leaky ReLU) to avoid vanishing gradients and improve convergence. 117 | - Employ optimization techniques like Adam, RMSProp, or SGD with momentum for faster convergence. 118 | - Learning rate scheduling can help in balancing exploration and exploitation during training. 119 | 120 | **Regularization and Dropout:** 121 | - Regularization techniques like L2 regularization, dropout, and batch normalization help prevent overfitting. 122 | - Apply dropout in moderation to prevent underfitting. 123 | 124 | **Hyperparameter Tuning:** 125 | - Experiment with learning rates, batch sizes, and network architectures. 126 | - Utilize techniques like random search or Bayesian optimization for efficient hyperparameter tuning. 127 | 128 | **Neural Architecture Search (NAS):** 129 | 130 | - NAS automates the process of finding optimal neural network architectures. 131 | - Techniques like reinforcement learning and evolutionary algorithms are used for NAS. 132 | 133 | **Quantization and Model Compression:** 134 | 135 | - Reduce model size and inference latency through techniques like quantization and pruning. 136 | - Quantization involves representing weights with fewer bits, while pruning removes less important connections. 137 | 138 | **Domain Adaptation:** 139 | 140 | - Adapt a model trained on one domain to perform well on a different but related domain. 141 | - Techniques like domain adversarial training and self-training can be used for domain adaptation. 142 | 143 | **Semi-Supervised Learning:** 144 | 145 | - Combine labeled and unlabeled data to improve model performance, especially when labeled data is scarce. 146 | - Techniques like pseudo-labeling and consistency regularization are common in semi-supervised learning. 147 | 148 | 149 | **Gaussian Processes in Bayesian Deep Learning:** 150 | 151 | - Utilize Gaussian processes for uncertainty estimation and probabilistic modeling in deep learning. 152 | - Bayesian neural networks and variational inference techniques also contribute to uncertainty quantification. 153 | 154 | **Data Augmentation:** 155 | - Apply data augmentation techniques (rotation, cropping, flipping) to increase the diversity of the training data. 156 | - Augmentation helps improve model generalization. 157 | 158 | **Transfer Learning and Pretrained Models:** 159 | - Utilize pretrained models and fine-tuning to leverage features learned on large datasets. 160 | - Adapt pretrained models to your specific task to improve convergence and performance. 161 | 162 | **Meta-Learning:** 163 | 164 | - Meta-learning involves training models to learn how to learn new tasks more efficiently. 165 | - Few-shot learning and model-agnostic meta-learning (MAML) are common meta-learning approaches. 166 | - Experiment with different meta-learning algorithms and adaptation strategies. 167 | 168 | **Knowledge Distillation:** 169 | 170 | - Train compact "student" models to mimic the behavior of larger "teacher" models. 171 | - Knowledge distillation helps transfer knowledge from complex models to smaller ones. 172 | - Experiment with different temperature settings and loss functions for effective distillation. 173 | 174 | 175 | **Transformers:** 176 | - Transformers are attention-based architectures that excel at modeling long-range dependencies in sequential and structured data (e.g., text, images, videos). They replace recurrence and convolution with self-attention mechanisms, enabling parallel processing and scalability. 177 | - **Self-Attention Mechanism:** 178 | - Computes weighted interactions between all input tokens, dynamically focusing on relevant context. Multi-head attention extends this by capturing diverse relationships in parallel. 179 | - **Positional Encoding:** 180 | - Injects spatial/temporal order into input embeddings (e.g., sine/cosine functions or learned embeddings) since Transformers lack inherent sequential bias. 181 | - **Scalability:** 182 | - Pretrained on massive datasets (e.g., BERT for NLP, ViT for vision), Transformers transfer well to downstream tasks via fine-tuning. Larger models (e.g., GPT-4) achieve state-of-the-art results but require significant computational resources. 183 | - **Efficiency Innovations:** 184 | - Techniques like sparse attention, axial attention, or memory-efficient variants (e.g., Linformer) reduce the quadratic complexity of self-attention for long sequences. 185 | - **Tips and Tricks:** 186 | - **Pretraining and Transfer Learning:** 187 | - Start with pretrained models (e.g., Hugging Face’s Transformers library) and fine-tune on domain-specific data. Use task-specific adapters to avoid full retraining. 188 | - **Manage Sequence Length:** 189 | - For long inputs, truncate, chunk, or use hierarchical attention. FlashAttention or mixed-precision training can optimize GPU memory usage. 190 | - **Hybrid Architectures:** 191 | - Combine CNNs (local features) with Transformers (global context) in vision tasks (e.g., Swin Transformer, ConvNeXt). 192 | - **Warmup and Decay:** 193 | - Apply learning rate warmup (gradually increasing LR) to stabilize early training. Follow with cosine decay for convergence. 194 | - **Regularization:** 195 | - Use dropout in attention layers and feed-forward networks. Layer normalization before (not after) residual connections often improves stability. 196 | - **Hardware Optimization:** 197 | - Leverage tensor cores (FP16/AMP) and model parallelism (e.g., pipeline or tensor sharding) for large models. 198 | 199 | 200 | **Mamba** 201 | - The Mamba Model Architecture is designed to optimize performance through efficient resource usage and robust feature extraction. It integrates dynamic scaling and attention mechanisms to balance speed and accuracy. 202 | - **Dynamic scaling:** 203 | - Adjusts model depth and width based on the complexity of the input data. 204 | - **Integrated attention modules:** 205 | - Focuses on key features during inference for improved decision-making. 206 | - **Memory efficiency:** 207 | - Optimizes computational resources, making it suitable for deployment in resource-constrained environments. 208 | - **Tips and Tricks:** 209 | - **Leverage pretraining:** 210 | - Pretrain the Mamba model on similar tasks to capture domain-specific features, then fine-tune for your application. 211 | - **Use mixed precision training:** 212 | - Reduce computational load and speed up training while maintaining accuracy by using mixed precision techniques. 213 | - **Monitor scaling dynamics:** 214 | - Regularly analyze how dynamic scaling adjusts the model’s architecture during training to ensure it aligns with task complexity. 215 | - **Integrate custom attention:** 216 | - Experiment with different attention mechanisms within the architecture to enhance feature focus and performance. 217 | 218 | 219 | **Mamba vs. Transformers** 220 | 221 | **1. Core Architecture** 222 | - **Transformers:** 223 | - Built on **self-attention mechanisms** to model relationships between all input tokens (e.g., words, image patches). 224 | - **Fixed architecture** (predefined layers, heads, dimensions) with positional encoding for sequence awareness. 225 | - Dominates tasks requiring **global context** (e.g., machine translation, image classification with ViT). 226 | 227 | - **Mamba:** 228 | - Emphasizes **dynamic scaling** to adapt model depth/width based on input complexity. 229 | - Integrates **hybrid attention-convolution modules** for local-global feature balance. 230 | - Designed for **resource efficiency** (e.g., edge devices, low-memory settings). 231 | 232 | 233 | **2. Attention and Context Handling** 234 | - **Transformers:** 235 | - **Global self-attention:** Captures interactions between all tokens, enabling long-range dependencies. 236 | - Quadratic complexity \(O(n^2)\) limits scalability for long sequences (e.g., high-resolution images, genomics). 237 | - Mitigations: Sparse attention (e.g., Longformer), chunking, or memory-efficient variants (FlashAttention). 238 | 239 | - **Mamba:** 240 | - Uses **adaptive attention** focused on critical regions (reduces redundant computation). 241 | - **Hierarchical processing** combines local convolutions with sparse attention for efficiency. 242 | - Better suited for **long sequences** with linear or sub-quadratic complexity. 243 | 244 | 245 | **3. Computational Efficiency** 246 | - **Transformers:** 247 | - High memory/FLOPs cost due to dense attention and large parameter counts. 248 | - Requires heavy optimization (mixed precision, model parallelism) for training/inference. 249 | - Ideal for GPU/TPU clusters but struggles on edge devices. 250 | 251 | - **Mamba:** 252 | - **Dynamic scaling** reduces redundant computations (e.g., skips layers for simpler inputs). 253 | - Optimized for **on-device deployment** via parameter pruning and mixed-precision support. 254 | - Lower latency in resource-constrained environments (e.g., real-time video processing). 255 | 256 | 257 | **4. Scalability and Training** 258 | - **Transformers:** 259 | - Scale exceptionally with data and parameters (e.g., GPT-4, PaLM). 260 | - Pretraining on massive datasets is critical for downstream performance. 261 | - Stable training with standardized techniques (warmup, layer normalization). 262 | 263 | - **Mamba:** 264 | - Scales **adaptively**, avoiding over-parameterization for simpler tasks. 265 | - Pretraining benefits exist but less dependent on extreme dataset sizes. 266 | - Training dynamics require careful monitoring of scaling behavior. 267 | 268 | 269 | **5. Use Case Suitability** 270 | - **Transformers Excel At:** 271 | - **Global context tasks:** Language modeling, cross-modal retrieval (text-to-image). 272 | - **Large-scale pretraining:** Transfer learning to diverse downstream tasks. 273 | - **High-resource environments:** Cloud/TPU-based inference. 274 | 275 | - **Mamba Excels At:** 276 | - **Resource-limited applications:** Edge devices, mobile/embedded systems. 277 | - **Dynamic input complexity:** Tasks where input varies in difficulty (e.g., medical imaging with variable lesion sizes). 278 | - **Real-time processing:** Autonomous systems, low-latency video analysis. 279 | 280 | 281 | **6. Strengths and Weaknesses** 282 | | Aspect | Transformers | Mamba | 283 | |-----------------------|-----------------------------------------------|--------------------------------------------| 284 | | **Strengths** | - State-of-the-art accuracy
- Global context modeling
- Massive scalability | - Computational efficiency
- Dynamic adaptation
- Edge compatibility | 285 | | **Weaknesses** | - Quadratic complexity
- High memory use
- Overkill for simple tasks | - Less proven at extreme scales
- Niche adoption
- Complex dynamic tuning | 286 | 287 | 288 | 289 | **7. Practical Tips** 290 | - **When to Choose Transformers:** 291 | - Your task requires **global context** (e.g., document summarization). 292 | - You have abundant computational resources and pretraining data. 293 | - You need a well-supported architecture (e.g., Hugging Face ecosystem). 294 | 295 | - **When to Choose Mamba:** 296 | - **Latency/memory constraints** are critical (e.g., IoT devices). 297 | - Input complexity varies widely (e.g., multi-scale segmentation). 298 | - You want to avoid over-parameterization for smaller datasets. 299 | 300 | 301 | 302 | 303 | --------------------------------------------------------------------------------