├── .gitignore ├── README.md ├── ar_detection ├── .ipynb_checkpoints │ ├── AR Detection using IVT and floodFillSearch-checkpoint.ipynb │ ├── AR_detection_CAM-checkpoint.ipynb │ └── Exploring Event Detection Apporaches-checkpoint.ipynb ├── AR Detection using IVT and floodFillSearch.ipynb ├── AR_detection_CAM.ipynb ├── Exploring Event Detection Apporaches.ipynb ├── IWV_IVT_MERRA_20170228_00.nc ├── calculate_pressure_integral.py ├── calculate_pressure_integral.pyc ├── floodfillsearch │ ├── .gitignore │ ├── Makefile │ ├── __init__.py │ ├── __init__.pyc │ ├── floodFillSearch.py │ ├── floodFillSearch.pyd │ ├── setup.py │ └── testTiming.py ├── gen_ivt_and_wvp_from_merra_files.py └── simplempi │ ├── README.md │ ├── __init__.py │ └── simpleMPI.py ├── semanticsegm ├── #create_combined_labels.py# ├── #write_out_storms.py# ├── combined_labels_batch_script.sh ├── convert_to_tf_records.py ├── create_AR_labels.py ├── create_combined_cropped_labels.py ├── create_combined_labels.py ├── create_dataset │ ├── 1996_IVT_test.sh │ ├── 1996_TMQ_no_height_width_test.sh │ ├── 1996_test.sh │ ├── CAM5-1-0.25degree_Low_Aero_run2_knl.sh │ ├── HAPPI15_default.sh │ ├── HAPPI15_medium.sh │ ├── HAPPI15_relaxed.sh │ ├── HAPPI15_super_relaxed.sh │ ├── create_multichannel_cropped_labels.py │ ├── create_multichannel_multithreshold_labels.py │ ├── gb_dataset_All-Hist.sh │ ├── gb_dataset_HAPPI15.sh │ ├── gb_dataset_HAPPI20.sh │ ├── make_pandas_table.py │ ├── nvidia_job.sh │ ├── shuffle_indices_glob_files.npy │ ├── teca_shell │ │ ├── AllHist_super_relaxed_run1.sh │ │ ├── AllHist_super_relaxed_run2.sh │ │ ├── AllHist_super_relaxed_run3.sh │ │ ├── AllHist_super_relaxed_run4.sh │ │ ├── AllHist_super_relaxed_run5.sh │ │ ├── HAPPI15_default.sh │ │ ├── HAPPI15_medium.sh │ │ ├── HAPPI15_relaxed.sh │ │ ├── HAPPI15_super_relaxed.sh │ │ ├── HAPPI15_super_relaxed_run2.sh │ │ ├── HAPPI15_super_relaxed_run3.sh │ │ ├── HAPPI15_super_relaxed_run4.sh │ │ ├── HAPPI15_super_relaxed_run5.sh │ │ ├── HAPPI15_super_relaxed_run6.sh │ │ ├── HAPPI20_super_relaxed.sh │ │ ├── HAPPI20_super_relaxed_run1.sh │ │ ├── HAPPI20_super_relaxed_run2.sh │ │ ├── HAPPI20_super_relaxed_run3.sh │ │ ├── HAPPI20_super_relaxed_run4.sh │ │ ├── HAPPI20_super_relaxed_run5.sh │ │ ├── HAPPI20_super_relaxed_run6.sh │ │ ├── nvidia_job.sh │ │ └── wind_tracks_shell │ │ │ ├── All_Hist_wind_tracks_super_relaxed_run1.sh │ │ │ ├── All_Hist_wind_tracks_super_relaxed_run2.sh │ │ │ ├── All_Hist_wind_tracks_super_relaxed_run3.sh │ │ │ ├── All_Hist_wind_tracks_super_relaxed_run4.sh │ │ │ ├── All_Hist_wind_tracks_super_relaxed_run5.sh │ │ │ ├── HAPPI15_wind_tracks_super_relaxed_run1.sh │ │ │ ├── HAPPI15_wind_tracks_super_relaxed_run2.sh │ │ │ ├── HAPPI15_wind_tracks_super_relaxed_run3.sh │ │ │ ├── HAPPI15_wind_tracks_super_relaxed_run4.sh │ │ │ ├── HAPPI15_wind_tracks_super_relaxed_run5.sh │ │ │ ├── HAPPI15_wind_tracks_super_relaxed_run6.sh │ │ │ └── HAPPI20_wind_tracks_super_relaxed_run1.sh │ └── validation_scripts │ │ ├── find_diff_label0_label1.py │ │ ├── plot_years_images.py │ │ └── test_label0_vs_label1.py ├── create_multichannel_cropped_labels.py ├── create_storm_labels.py ├── create_subtables_script.sh ├── deeplab-tf │ ├── deeplab-gb-tf.py │ ├── deeplab-tf-inference.py │ ├── deeplab-tf-train.py │ └── deeplab_model.py ├── extract_patch_around_storm_center.py ├── floodfillsearch │ ├── .gitignore │ ├── Makefile │ ├── __init__.py │ ├── __init__.pyc │ ├── floodFillSearch.py │ ├── floodFillSearch.pyd │ ├── setup.py │ └── testTiming.py ├── generate_teca_npy_files.py ├── label_format_readme.txt ├── lat_lon.pkl ├── make_teca_subtables.py ├── make_train_list.py ├── mask_code_guide │ ├── mask_ex.png │ ├── plot_point_ex.png │ └── storm_masks.py ├── np2image.py ├── nvidia_job.sh ├── plot_masks.py ├── plotting │ ├── lat_lon.pkl │ ├── plot_masks.py │ └── run_plot.sh ├── read_coco_data.py ├── readme.md ├── run_scripts │ ├── bigruns_update │ │ ├── crappy_nodes.txt │ │ ├── run_deeplab_deconv.sh │ │ ├── run_deeplab_deconv_fp16.sh │ │ ├── run_deeplab_deconv_perftest.sh │ │ ├── run_deeplab_fp16.sh │ │ ├── run_env.sh │ │ ├── run_mascarpone_fp16.sh │ │ ├── run_mascarpone_perftest.sh │ │ ├── run_summit_dl_1_fp32_0.sh │ │ ├── stage_env.sh │ │ └── stage_in_parallel.sh │ ├── cori │ │ ├── run_cori_knl_deeplab.sh │ │ ├── run_cori_knl_tiramisu.sh │ │ ├── run_create_bb_reservation.sh │ │ ├── run_deeplab_cori_knl.sh │ │ ├── run_destroy_bb_reservation.sh │ │ ├── run_reformat_files.sh │ │ ├── run_reformat_files.sh~ │ │ ├── run_summarize_files.sh │ │ ├── run_summarize_files.sh~ │ │ └── stage_in_parallel.sh │ ├── daint │ │ ├── run_daint_p100.sh │ │ └── stage_in_parallel.sh │ ├── edison │ │ ├── run_edison_ivb.sh │ │ ├── run_edison_ivb.sh~ │ │ ├── run_reformat_files.sh~ │ │ ├── run_summarize_files.sh │ │ ├── run_summarize_files.sh~ │ │ └── stage_in_parallel.sh │ ├── gori │ │ ├── run_deeplab-gb_gori_v100.sh │ │ ├── run_deeplab_gori_v100.sh │ │ ├── run_deeplab_gori_v100.sh~ │ │ ├── run_tiramisu_lite_gori_v100.sh │ │ ├── run_tiramisu_lite_gori_v100.sh~ │ │ ├── run_tiramisu_profile_lite_gori_v100.sh │ │ └── stage_in_parallel.sh │ ├── maeve │ │ ├── Dockerfile │ │ ├── run_container.sh │ │ ├── run_deeplab_lite_maeve_titanx.sh │ │ ├── run_deeplab_maeve_titanx.sh │ │ ├── run_tiramisu_lite_maeve_titanx.sh │ │ └── run_tiramisu_profile_lite_maeve_titanx.sh │ ├── summit │ │ ├── run_deeplab.sh │ │ ├── run_deeplab.sh~ │ │ ├── run_deeplab_deconv.sh │ │ ├── run_deeplab_deconv_fp16.sh │ │ ├── run_deeplab_deconv_perftest.sh │ │ ├── run_deeplab_fp16.sh │ │ ├── run_env.sh │ │ ├── run_mascarpone.sh │ │ ├── run_mascarpone_fp16.sh │ │ ├── run_mascarpone_perftest.sh │ │ ├── run_summit_64_fp16_0.sh │ │ ├── run_summit_64_fp32_0.sh │ │ ├── run_summit_dl_1024.sh │ │ ├── run_summit_dl_1_fp32_0.sh │ │ ├── run_summit_dl_256.sh │ │ └── stage_in_parallel.sh │ └── tuning_analysis.ipynb ├── semantic_train.py ├── test.png ├── test_read.py ├── tiramisu-keras.ipynb ├── tiramisu-tf │ ├── .gitignore │ ├── tiramisu-tf-inference.py │ ├── tiramisu-tf-train.py │ └── tiramisu_model.py ├── tiramisu │ ├── extract_img_label_files_multichannel.py │ ├── plot_model_results_no_latlon_multi.py │ ├── tiramisu-keras-multi-generator.py │ └── tiramisu-keras-multi.py ├── utils │ ├── climseg_helpers.py │ ├── common_helpers.py │ ├── data_helpers.py │ ├── graph_flops.py │ ├── make_tfrecord.py │ ├── merge_files.py │ ├── parallel_stagein.py │ ├── reformat_files.py │ ├── split_dataset.py │ ├── split_dataset.py~ │ ├── summarize_stats.py │ ├── test_curriculum.py │ ├── test_loss_function.py │ ├── tracehook.py │ └── verify_model.py ├── write_out_storms.py └── zeros_to_tfrecords.py ├── stormtracking ├── inference.py ├── main_2.py ├── read_data.py ├── read_data_sparse.py ├── readme.md └── rnn.py ├── utilities └── make_dataset.py └── vis ├── mill_projection.png ├── plot_cam5.py └── robin_projection.png /.gitignore: -------------------------------------------------------------------------------- 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