├── .gitmodules ├── LICENSE ├── README.md ├── aa_model.py ├── chemical.py ├── config └── inference │ ├── aa.yaml │ └── base.yaml ├── contigs.py ├── diffusion.py ├── idealize_backbone.py ├── igso3.py ├── img └── RFDiffusionAA.png ├── inference ├── model_runners.py └── utils.py ├── input ├── 1haz.pdb └── 7v11.pdb ├── kinematics.py ├── mask_generator.py ├── metrics.py ├── pdbio.py ├── potentials ├── manager.py └── potentials.py ├── rf2aa ├── rotation_conversions.py ├── run_inference.py ├── util.py └── util_module.py /.gitmodules: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baker-laboratory/rf_diffusion_all_atom/HEAD/.gitmodules -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baker-laboratory/rf_diffusion_all_atom/HEAD/LICENSE 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