├── Figures ├── PR_99_balanced.svg ├── PR_99_unbalanced.svg ├── SdrG_Fibrinogen.svg ├── TLR4_HMGB1.svg └── TLR4_PSMa.svg ├── README.md ├── approach.png ├── bootstrap_resampling.py ├── create_examples.py ├── download_pdbs.py ├── humsavar.txt ├── interactions_data.txt ├── k-fold-CV.py ├── list_of_prots.txt └── parse_entries.py /Figures/PR_99_balanced.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/Figures/PR_99_balanced.svg -------------------------------------------------------------------------------- /Figures/PR_99_unbalanced.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/Figures/PR_99_unbalanced.svg -------------------------------------------------------------------------------- /Figures/SdrG_Fibrinogen.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/Figures/SdrG_Fibrinogen.svg -------------------------------------------------------------------------------- /Figures/TLR4_HMGB1.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/Figures/TLR4_HMGB1.svg -------------------------------------------------------------------------------- /Figures/TLR4_PSMa.svg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/Figures/TLR4_PSMa.svg -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/README.md -------------------------------------------------------------------------------- /approach.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/approach.png -------------------------------------------------------------------------------- /bootstrap_resampling.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/bootstrap_resampling.py -------------------------------------------------------------------------------- /create_examples.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/create_examples.py -------------------------------------------------------------------------------- /download_pdbs.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/download_pdbs.py -------------------------------------------------------------------------------- /humsavar.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/humsavar.txt -------------------------------------------------------------------------------- /interactions_data.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/interactions_data.txt -------------------------------------------------------------------------------- /k-fold-CV.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/k-fold-CV.py -------------------------------------------------------------------------------- /list_of_prots.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/list_of_prots.txt -------------------------------------------------------------------------------- /parse_entries.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/baranwa2/Struct2Graph/HEAD/parse_entries.py --------------------------------------------------------------------------------